RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 THOC7Q6I9Y2 204 aaKnown RBP18.85■□□□□ 0.61
PKP3-201ENST00000331563 OTOP1Q7RTM1 612 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 ACSS3Q9H6R3 686 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 ZNF395Q9H8N7 513 aaPredicted RBP18.85■□□□□ 0.61
PKP3-201ENST00000331563 HSPBP1Q9NZL4 362 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 STRIP2Q9ULQ0 834 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 A0A088AWK7 358 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 ARHGEF35A5YM69 484 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 CAPN8A6NHC0 703 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 COPEO14579 308 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 C6orf222P0C671 652 aaPredicted RBP18.85■□□□□ 0.61
PKP3-201ENST00000331563 PMLP29590 882 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 CEP55Q53EZ4 464 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 RNF111Q6ZNA4 994 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 ADGRG6Q86SQ4 1221 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 KATNAL2Q8IYT4 538 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 EXD1Q8NHP7 514 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 PLEKHO2Q8TD55 490 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 DCAKDQ8WVC6 231 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 HSD17B14Q9BPX1 270 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 C11orf70Q9BRQ4 267 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 RPAP3Q9H6T3 665 aaPredicted RBP18.85■□□□□ 0.61
PKP3-201ENST00000331563 RIPK3Q9Y572 518 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 MYH11P35749 1972 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 TFAP2AP05549 437 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 RAG1P15918 1043 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 ITGB5P18084 799 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 EIF2AK2P19525 551 aaKnown RBP18.84■□□□□ 0.61
PKP3-201ENST00000331563 STIP1P31948 543 aaKnown RBP18.84■□□□□ 0.61
PKP3-201ENST00000331563 SSTR3P32745 418 aaPredicted RBP18.84■□□□□ 0.61
PKP3-201ENST00000331563 NCKAP1LP55160 1127 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 CLPPQ16740 277 aaPredicted RBP18.84■□□□□ 0.61
PKP3-201ENST00000331563 MSS51Q4VC12 460 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 ZNF362Q5T0B9 420 aaPredicted RBP18.84■□□□□ 0.61
PKP3-201ENST00000331563 C1orf220Q5T0J3 134 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 FNBP1LQ5T0N5 605 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 FAM91A1Q658Y4 838 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 KYAT3Q6YP21 454 aaKnown RBP18.84■□□□□ 0.61
PKP3-201ENST00000331563 FAM160B2Q86V87 743 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 POU5F2Q8N7G0 328 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 HNRNPABQ99729 332 aaKnown RBP18.84■□□□□ 0.61
PKP3-201ENST00000331563 ZNF577Q9BSK1 485 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 CROTQ9UKG9 612 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 HEY1Q9Y5J3 304 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 ZHX2Q9Y6X8 837 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 ARHGAP10A1A4S6 786 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 GAS7O60861 476 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 KRT1P04264 644 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 HMGCS2P54868 508 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 BST1Q10588 318 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 PDCD4Q53EL6 469 aaKnown RBP18.84■□□□□ 0.61
PKP3-201ENST00000331563 RALGPS1Q5JS13 557 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 PASD1Q8IV76 773 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 ZFP28Q8NHY6 868 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 DDX1Q92499 740 aaKnown RBP18.84■□□□□ 0.61
PKP3-201ENST00000331563 SNX27Q96L92 541 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 SHCBP1LQ9BZQ2 653 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 GGA3Q9NZ52 723 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 APPL1Q9UKG1 709 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 POLIQ9UNA4 740 aa18.84■□□□□ 0.61
PKP3-201ENST00000331563 FAF1Q9UNN5 650 aaPredicted RBP18.84■□□□□ 0.61
PKP3-201ENST00000331563 IPO5O00410 1097 aaKnown RBP18.83■□□□□ 0.61
PKP3-201ENST00000331563 GRIN3BO60391 1043 aa18.83■□□□□ 0.61
PKP3-201ENST00000331563 SERPINB7O75635 380 aa18.83■□□□□ 0.61
PKP3-201ENST00000331563 SORBS2O94875 1100 aaKnown RBP18.83■□□□□ 0.61
PKP3-201ENST00000331563 SMIM18P0DKX4 95 aa18.83■□□□□ 0.61
PKP3-201ENST00000331563 IRX4P78413 519 aa18.83■□□□□ 0.61
PKP3-201ENST00000331563 FAAP100Q0VG06 881 aa18.83■□□□□ 0.61
PKP3-201ENST00000331563 ITGA7Q13683 1181 aa18.83■□□□□ 0.61
PKP3-201ENST00000331563 CRLF3Q8IUI8 442 aa18.83■□□□□ 0.61
PKP3-201ENST00000331563 MZB1Q8WU39 189 aa18.83■□□□□ 0.61
PKP3-201ENST00000331563 CLEC4DQ8WXI8 215 aa18.83■□□□□ 0.61
PKP3-201ENST00000331563 ACSF2Q96CM8 615 aaPredicted RBP18.83■□□□□ 0.61
PKP3-201ENST00000331563 ATG4CQ96DT6 458 aa18.83■□□□□ 0.61
PKP3-201ENST00000331563 MRPL1Q9BYD6 325 aaKnown RBP18.83■□□□□ 0.61
PKP3-201ENST00000331563 DTNAQ9Y4J8 743 aa18.83■□□□□ 0.61
PKP3-201ENST00000331563 POLR2AP24928 1970 aaKnown RBP18.83■□□□□ 0.61
PKP3-201ENST00000331563 ICAM1P05362 532 aa18.83■□□□□ 0.6
PKP3-201ENST00000331563 ETV4P43268 484 aa18.83■□□□□ 0.6
PKP3-201ENST00000331563 ALCAMQ13740 583 aa18.83■□□□□ 0.6
PKP3-201ENST00000331563 ADRM1Q16186 407 aa18.83■□□□□ 0.6
PKP3-201ENST00000331563 LIN9Q5TKA1 542 aa18.83■□□□□ 0.6
PKP3-201ENST00000331563 IYDQ6PHW0 289 aa18.83■□□□□ 0.6
PKP3-201ENST00000331563 CNBD2Q96M20 576 aa18.83■□□□□ 0.6
PKP3-201ENST00000331563 C10orf88Q9H8K7 445 aa18.83■□□□□ 0.6
PKP3-201ENST00000331563 TUFT1Q9NNX1 390 aa18.83■□□□□ 0.6
PKP3-201ENST00000331563 AVENQ9NQS1 362 aaPredicted RBP18.83■□□□□ 0.6
PKP3-201ENST00000331563 E9PBE3 544 aa18.82■□□□□ 0.6
PKP3-201ENST00000331563 PSMD10O75832 226 aa18.82■□□□□ 0.6
PKP3-201ENST00000331563 CYP3A4P08684 503 aa18.82■□□□□ 0.6
PKP3-201ENST00000331563 DHRS4L1P0CG22 281 aa18.82■□□□□ 0.6
PKP3-201ENST00000331563 MYCLP12524 364 aaPredicted RBP18.82■□□□□ 0.6
PKP3-201ENST00000331563 XIAPP98170 497 aa18.82■□□□□ 0.6
PKP3-201ENST00000331563 PPIDQ08752 370 aaKnown RBP18.82■□□□□ 0.6
PKP3-201ENST00000331563 PTP4A2Q12974 167 aa18.82■□□□□ 0.6
PKP3-201ENST00000331563 CHI3L2Q15782 390 aa18.82■□□□□ 0.6
PKP3-201ENST00000331563 TCHHL1Q5QJ38 904 aaPredicted RBP18.82■□□□□ 0.6
PKP3-201ENST00000331563 ANKRD22Q5VYY1 191 aa18.82■□□□□ 0.6
PKP3-201ENST00000331563 ATG16L1Q676U5 607 aa18.82■□□□□ 0.6
PKP3-201ENST00000331563 MFSD7Q6UXD7 560 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms