RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 SPDYAQ5MJ70 313 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 TMC5Q6UXY8 1006 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 SH2D3CQ8N5H7 860 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 ALDH1A2O94788 518 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 AKT1P31749 480 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 ELAVL2Q12926 359 aaKnown RBP6.53□□□□□ -1.36
SSH1-202ENST00000326495 SAMD4BQ5PRF9 694 aaKnown RBP6.53□□□□□ -1.36
SSH1-202ENST00000326495 TCHHL1Q5QJ38 904 aaPredicted RBP6.53□□□□□ -1.36
SSH1-202ENST00000326495 C12orf60Q5U649 245 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 ZNF772Q68DY9 489 aaPredicted RBP6.53□□□□□ -1.36
SSH1-202ENST00000326495 QRFPRQ96P65 431 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 SLITRK1Q96PX8 696 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 COQ7Q99807 217 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 CYP3A43Q9HB55 503 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 KRT34O76011 436 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 TMEM253P0C7T8 217 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 C2CD6Q53TS8 623 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 XKR3Q5GH77 459 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 SEL1L3Q68CR1 1132 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 TLK2Q86UE8 772 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 RNF135Q8IUD6 432 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 HELQQ8TDG4 1101 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 FAM172AQ8WUF8 416 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 SPATA5L1Q9BVQ7 753 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 HSPBP1Q9NZL4 362 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 POLD2P49005 469 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 UCMAQ8WVF2 138 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 ZNF184Q99676 751 aaPredicted RBP6.53□□□□□ -1.36
SSH1-202ENST00000326495 ECSITQ9BQ95 431 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 C1QTNF7Q9BXJ2 289 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 RACGAP1Q9H0H5 632 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 TASP1Q9H6P5 420 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 COMMD8Q9NX08 183 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 PKP3Q9Y446 797 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 SNX9Q9Y5X1 595 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 FER1L4A9Z1Z3 1794 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 ANKRD65E5RJM6 399 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 PRKAB2O43741 272 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 MAPK8P45983 427 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 SNRNP35Q16560 246 aaKnown RBP6.53□□□□□ -1.36
SSH1-202ENST00000326495 LRRC36Q1X8D7 754 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 PROSER3Q2NL68 480 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 MDH1BQ5I0G3 518 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 ZFYVE19Q96K21 471 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 DEPDC7Q96QD5 511 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 WDR12Q9GZL7 423 aaKnown RBP6.53□□□□□ -1.36
SSH1-202ENST00000326495 UNC45AQ9H3U1 944 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 TAGLN3Q9UI15 199 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 CYTH3O43739 400 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 COILP38432 576 aaPredicted RBP6.53□□□□□ -1.36
SSH1-202ENST00000326495 CHI3L2Q15782 390 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 EXD1Q8NHP7 514 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 EZH1Q92800 747 aaPredicted RBP6.53□□□□□ -1.36
SSH1-202ENST00000326495 TSEN34Q9BSV6 310 aaKnown RBP6.53□□□□□ -1.36
SSH1-202ENST00000326495 BBS2Q9BXC9 721 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 RHBDL2Q9NX52 303 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 UBAP1Q9NZ09 502 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 PCDH10Q9P2E7 1040 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 FHOD1Q9Y613 1164 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 MYO1GB0I1T2 1018 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 RNF103O00237 685 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 VWA5AO00534 786 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 FSBPO95073 299 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 EGFRP00533 1210 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 ZNF24P17028 368 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 PTX3P26022 381 aaPredicted RBP6.53□□□□□ -1.36
SSH1-202ENST00000326495 FXR2P51116 673 aaKnown RBP eCLIP6.53□□□□□ -1.36
SSH1-202ENST00000326495 FBXW4P57775 412 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 RAB2AP61019 212 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 FAM98BQ52LJ0 330 aaKnown RBP6.53□□□□□ -1.36
SSH1-202ENST00000326495 SBK1Q52WX2 424 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 PLEKHA7Q6IQ23 1121 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 CYB5R4Q7L1T6 521 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 CHP1Q99653 195 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 EPB41L4BQ9H329 900 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 TMBIM4Q9HC24 238 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 TNPO3Q9Y5L0 923 aaKnown RBP6.53□□□□□ -1.36
SSH1-202ENST00000326495 PGK2P07205 417 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 GALCP54803 685 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 PPIDQ08752 370 aaKnown RBP6.53□□□□□ -1.36
SSH1-202ENST00000326495 UBE2SQ16763 222 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 SLITRK2Q9H156 845 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 MPDZO75970 2070 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 CCDC162PA2VCL2 907 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 MED24O75448 989 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 CES1P23141 567 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 NUDT2P50583 147 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 ITGA8P53708 1063 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 NFX1Q12986 1120 aaKnown RBP6.53□□□□□ -1.36
SSH1-202ENST00000326495 EPHA7Q15375 998 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 TMEM47Q9BQJ4 181 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 POLR3FQ9H1D9 316 aaPredicted RBP6.53□□□□□ -1.36
SSH1-202ENST00000326495 THAP1Q9NVV9 213 aa6.53□□□□□ -1.36
SSH1-202ENST00000326495 FAM47E-STBD1D6RA91 191 aa6.52□□□□□ -1.37
SSH1-202ENST00000326495 ADSLP30566 484 aaPredicted RBP6.52□□□□□ -1.37
SSH1-202ENST00000326495 IL12RB1P42701 662 aa6.52□□□□□ -1.37
SSH1-202ENST00000326495 IER5Q5VY09 327 aa6.52□□□□□ -1.37
SSH1-202ENST00000326495 RFX8Q6ZV50 586 aa6.52□□□□□ -1.37
SSH1-202ENST00000326495 ZNF786Q8N393 782 aa6.52□□□□□ -1.37
SSH1-202ENST00000326495 KYQ8NBH2 561 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms