RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PHF2O75151 1096 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 OAS1P00973 400 aaKnown RBP13.64□□□□□ -0.23
CPNE1-201ENST00000317677 RFC1P35251 1148 aaPredicted RBP13.64□□□□□ -0.23
CPNE1-201ENST00000317677 GABRB2P47870 512 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 CYP1B1Q16678 543 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 PKDCCQ504Y2 493 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 PPP1R26Q5T8A7 1209 aaPredicted RBP13.64□□□□□ -0.23
CPNE1-201ENST00000317677 OR52E8Q6IFG1 317 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 LCLAT1Q6UWP7 414 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 DPH6Q7L8W6 267 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 ACOT1Q86TX2 421 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 ARFGAP1Q8N6T3 406 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 MAIP1Q8WWC4 291 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 ATXN2LQ8WWM7 1075 aaKnown RBP13.64□□□□□ -0.23
CPNE1-201ENST00000317677 SEC14L1Q92503 715 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 PPP1R10Q96QC0 940 aaKnown RBP13.64□□□□□ -0.23
CPNE1-201ENST00000317677 NAP1L3Q99457 506 aaPredicted RBP13.64□□□□□ -0.23
CPNE1-201ENST00000317677 FAM192AQ9GZU8 254 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 FAM124BQ9H5Z6 455 aaPredicted RBP13.64□□□□□ -0.23
CPNE1-201ENST00000317677 TRMT13Q9NUP7 481 aaKnown RBP13.64□□□□□ -0.23
CPNE1-201ENST00000317677 FAM105AQ9NUU6 356 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 DNAAF2Q9NVR5 837 aaKnown RBP13.64□□□□□ -0.23
CPNE1-201ENST00000317677 MIOSQ9NXC5 875 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 IP6K2Q9UHH9 426 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 TMCO1Q9UM00 188 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 GMEB1Q9Y692 573 aa13.64□□□□□ -0.23
CPNE1-201ENST00000317677 PSTPIP1O43586 416 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 GABBR2O75899 941 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 CALB2P22676 271 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 SP100P23497 879 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-201ENST00000317677 MMP13P45452 471 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 NFX1Q12986 1120 aaKnown RBP13.63□□□□□ -0.23
CPNE1-201ENST00000317677 USP4Q13107 963 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 FAM133BQ5BKY9 247 aaKnown RBP13.63□□□□□ -0.23
CPNE1-201ENST00000317677 FBXO47Q5MNV8 452 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 ACBD5Q5T8D3 534 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-201ENST00000317677 IRGCQ6NXR0 463 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 TTC30AQ86WT1 665 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-201ENST00000317677 LZICQ8WZA0 190 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 LPPQ93052 612 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 KLHL29Q96CT2 875 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 PIWIL1Q96J94 861 aaKnown RBP13.63□□□□□ -0.23
CPNE1-201ENST00000317677 HMX1Q9NP08 348 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-201ENST00000317677 ATXN10Q9UBB4 475 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 SIGLEC16A6NMB1 481 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 M0QZ92 97 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 UBOX5O94941 541 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 CD4P01730 458 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 KRT16P08779 473 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 LMO2P25791 158 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 THPOP40225 353 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 PSMC1P62191 440 aaKnown RBP13.63□□□□□ -0.23
CPNE1-201ENST00000317677 GOLGA7BQ2TAP0 167 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 TRNP1Q6NT89 227 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 RSPH3Q86UC2 560 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 OSTM1Q86WC4 334 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 RHOT1Q8IXI2 618 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 KATNAL2Q8IYT4 538 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 EMC1Q8N766 993 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 MCRS1Q96EZ8 462 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.63□□□□□ -0.234e-13■□□□□ 8
CPNE1-201ENST00000317677 PAK6Q9NQU5 681 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-201ENST00000317677 METTL5Q9NRN9 209 aaKnown RBP13.63□□□□□ -0.23
CPNE1-201ENST00000317677 FAM49BQ9NUQ9 324 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 KLHL11Q9NVR0 708 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 GDAP2Q9NXN4 497 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 ZNF232Q9UNY5 417 aa13.63□□□□□ -0.23
CPNE1-201ENST00000317677 A0A1B0GVG6 124 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 KPNA7A9QM74 516 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 PIK3R2O00459 728 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 DAPK3O43293 454 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 SNX3O60493 162 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 LRPAP1P30533 357 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 CD52P31358 61 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 GJC1P36383 396 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 MLH1P40692 756 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 ACLYP53396 1101 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 KLF1Q13351 362 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-201ENST00000317677 ITGA7Q13683 1181 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 MYBPC3Q14896 1274 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 DBN1Q16643 649 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 CCDC142Q17RM4 750 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 PARP6Q2NL67 630 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 DCUN1D2Q6PH85 259 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 AGMOQ6ZNB7 445 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 TTC39CQ8N584 583 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 ENDOVQ8N8Q3 282 aaKnown RBP13.62□□□□□ -0.23
CPNE1-201ENST00000317677 NIPA2Q8N8Q9 360 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 C12orf50Q8NA57 414 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-201ENST00000317677 OR2W6PQ8NHA6 318 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 PRCCQ92733 491 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-201ENST00000317677 PGM2Q96G03 612 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 DEFB118Q96PH6 123 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 RAB3IPQ96QF0 476 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-201ENST00000317677 SLX1AQ9BQ83 275 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 RNPEPL1Q9HAU8 725 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.62□□□□□ -0.232e-10■□□□□ 11.3
CPNE1-201ENST00000317677 KIAA1257Q9ULG3 409 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 STRIP2Q9ULQ0 834 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms