RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 TMEM87BQ96K49 555 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 DNAJC1Q96KC8 554 aaKnown RBP3.75□□□□□ -1.81
GEN1-201ENST00000317402 RPS6KC1Q96S38 1066 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 ARHGEF38Q9NXL2 777 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 NDE1Q9NXR1 346 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 DDX56Q9NY93 547 aaKnown RBP3.75□□□□□ -1.81
GEN1-201ENST00000317402 MPP6Q9NZW5 540 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 VPS4AQ9UN37 437 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 CSADQ9Y600 493 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 COPG1Q9Y678 874 aaKnown RBP3.75□□□□□ -1.81
GEN1-201ENST00000317402 STK25O00506 426 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 SPTLC1O15269 473 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 LYPLA1O75608 230 aaPredicted RBP3.75□□□□□ -1.81
GEN1-201ENST00000317402 NDUFB10O96000 172 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 VDRP11473 427 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 TARSP26639 723 aaKnown RBP3.75□□□□□ -1.81
GEN1-201ENST00000317402 ETFBP38117 255 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 RECQLP46063 649 aaPredicted RBP3.75□□□□□ -1.81
GEN1-201ENST00000317402 AP2B1P63010 937 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 BMPR2Q13873 1038 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 TRIM25Q14258 630 aaKnown RBP3.75□□□□□ -1.81
GEN1-201ENST00000317402 EFHBQ8N7U6 833 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 AGAP11Q8TF27 550 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 PTPRN2Q92932 1015 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 CHMP6Q96FZ7 201 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 GANQ9H2C0 597 aa3.75□□□□□ -1.81
GEN1-201ENST00000317402 VPS13AQ96RL7 3174 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 MEIS2O14770 477 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 APOA1P02647 267 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 TCP1P17987 556 aaKnown RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 NOMO3P69849 1222 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 ZNF200P98182 395 aaPredicted RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 KRT17Q04695 432 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 KCNH2Q12809 1159 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 SPARCL1Q14515 664 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 NOMO1Q15155 1222 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 AAK1Q2M2I8 961 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 NOMO2Q5JPE7 1267 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 ZNF618Q5T7W0 954 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 RSBN1LQ6PCB5 846 aaPredicted RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 FBXO25Q8TCJ0 367 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 HASPINQ8TF76 798 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 NRG4Q8WWG1 115 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 CCDC42Q96M95 316 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 LRRC37BQ96QE4 947 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 MTMR9Q96QG7 549 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 KCND1Q9NSA2 647 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 PARVAQ9NVD7 372 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 CROTQ9UKG9 612 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 SNX12Q9UMY4 172 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 IPPQ9Y573 584 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 PCDHA1Q9Y5I3 950 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 ESYT2A0FGR8 921 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 CARNS1A5YM72 827 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 TOM1O60784 492 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 NAT2P11245 290 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 IL4RP24394 825 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 PSMA3P25788 255 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 CACNA2D1P54289 1103 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 GALCP54803 685 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 GIT2Q14161 759 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 NCCRP1Q6ZVX7 275 aaPredicted RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 DEPDC1BQ8WUY9 529 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.74□□□□□ -1.81
GEN1-201ENST00000317402 NAF1Q96HR8 494 aaKnown RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 NDNQ99608 321 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 CNPY3Q9BT09 278 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 STRA6Q9BX79 667 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 A0A0B4J269 797 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 ZC3H11AO75152 810 aaKnown RBP eCLIP3.74□□□□□ -1.81
GEN1-201ENST00000317402 ATP5HO75947 161 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 DLGAP3O95886 979 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 CYP2C8P10632 490 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 ESRRAP11474 423 aaPredicted RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 EEF1B2P24534 225 aaKnown RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 SERPINB8P50452 374 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 NEK3P51956 506 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 SP2Q02086 613 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 TUBB3Q13509 450 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 ACAP2Q15057 778 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 KYNUQ16719 465 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 COBLL1Q53SF7 1204 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 TTC39CQ8N584 583 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 RNF148Q8N7C7 305 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 SH3KBP1Q96B97 665 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 LIN28AQ9H9Z2 209 aaKnown RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 PRDM5Q9NQX1 630 aaPredicted RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 INTS9Q9NV88 658 aaKnown RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 MTMR4Q9NYA4 1195 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 COL6A3P12111 3177 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 KRT87PA6NCN2 255 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 PEX1O43933 1283 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 FGGP02679 453 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 PLA2G4BP0C869 781 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 ACADSP16219 412 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 MARSP56192 900 aaKnown RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 PSMC5P62195 406 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 PITX1P78337 314 aaPredicted RBP3.74□□□□□ -1.81
GEN1-201ENST00000317402 DR1Q01658 176 aa3.74□□□□□ -1.81
GEN1-201ENST00000317402 NR1H3Q13133 447 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms