RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 EPS15L1Q9UBC2 864 aa4.96□□□□□ -1.62
PTPN13-201ENST00000316707 TMEM63AO94886 807 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 ACO1P21399 889 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 YWHABP31946 246 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 MAGEA6P43360 314 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 LIG4P49917 911 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 CREB5Q02930 508 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 TBL3Q12788 808 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 TAZQ16635 292 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 KCTD19Q17RG1 926 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 CDC42EP5Q6NZY7 148 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 RBM44Q6ZP01 1051 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 SP8Q8IXZ3 490 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 CEP70Q8NHQ1 597 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 GAB3Q8WWW8 586 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 FAM118BQ9BPY3 351 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 DCDC2Q9UHG0 476 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 CDH22Q9UJ99 828 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 AP4B1Q9Y6B7 739 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 KPNA7A9QM74 516 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 EIF2S1P05198 315 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 ZNF23P17027 643 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 OSBPP22059 807 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 EIF3EP60228 445 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 ROR1Q01973 937 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 DLG1Q12959 904 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 FAM102BQ5T8I3 360 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 TMC7Q7Z402 723 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 CDKL3Q8IVW4 592 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 COLGALT2Q8IYK4 626 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 FBXW8Q8N3Y1 598 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 TRIM56Q9BRZ2 755 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 APOL6Q9BWW8 343 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 USP29Q9HBJ7 922 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 KCNH7Q9NS40 1196 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 HERC5Q9UII4 1024 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 SLCO1B7G3V0H7 640 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 HNRNPRO43390 633 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 DNAJA2O60884 412 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 PSMA2P25787 234 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 PEX2P28328 305 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 CPOXP36551 454 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 CLDN10P78369 228 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 USP4Q13107 963 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 HERC3Q15034 1050 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 TRAPPC3LQ5T215 181 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 FAXCQ5TGI0 409 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 MEX3CQ5U5Q3 659 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 ALYREFQ86V81 257 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 KYQ8NBH2 561 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 RP9Q8TA86 221 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 HM13Q8TCT9 377 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 CCDC124Q96CT7 223 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 P2RX7Q99572 595 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 DRC3Q9H069 523 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 ETNK2Q9NVF9 386 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 ASNSD1Q9NWL6 643 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 TXNDC16Q9P2K2 825 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 AP4S1Q9Y587 144 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 A0A1B0GVG6 124 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 GOLGA8SH3BPF8 625 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 GOLGA8MH3BSY2 632 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 MED7O43513 233 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 E2F6O75461 281 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 ARP10275 920 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 CDH2P19022 906 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 PROZP22891 400 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 PMLP29590 882 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 AQP4P55087 323 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 SNX16P57768 344 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 SLC25A3Q00325 362 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 MTA1Q13330 715 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 LPIN1Q14693 890 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 HP1BP3Q5SSJ5 553 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 DARS2Q6PI48 645 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 TRIM67Q6ZTA4 783 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 RFX6Q8HWS3 928 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 DEFB107AQ8IZN7 70 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 TTC39CQ8N584 583 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 PRPF31Q8WWY3 499 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 PYDC1Q8WXC3 89 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 PRDM16Q9HAZ2 1276 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 PALMDQ9NP74 551 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 FAIMQ9NVQ4 179 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 RSL24D1Q9UHA3 163 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 RPS6KL1Q9Y6S9 549 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 A6NJR5 290 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 TOM1L1O75674 476 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 ESRRBO95718 433 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 MLNP12872 115 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 ETS2P15036 469 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 KDELR1P24390 212 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 HSPA1LP34931 641 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 GARSP41250 739 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 PRKAA2P54646 552 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 SEPT6Q14141 434 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 PDCD4Q53EL6 469 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 FASTKD1Q53R41 847 aaKnown RBP4.95□□□□□ -1.62
PTPN13-201ENST00000316707 KRT80Q6KB66 452 aa4.95□□□□□ -1.62
PTPN13-201ENST00000316707 GSDMBQ8TAX9 411 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms