RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 TMEM184AQ6ZMB5 413 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 PPFIBP1Q86W92 1011 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 METTL23Q86XA0 190 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 CCDC150Q8NCX0 1101 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 ANKRD20A12PQ8NF67 263 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 TRIM11Q96F44 468 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 CRELD1Q96HD1 420 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 C1orf74Q96LT6 269 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 TBATAQ96M53 351 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 MMS19Q96T76 1030 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 ACBD6Q9BR61 282 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 NIF3L1Q9GZT8 377 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 TLE6Q9H808 572 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 CYP3A43Q9HB55 503 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 FANCFQ9NPI8 374 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 NXF1Q9UBU9 619 aaKnown RBP8.7□□□□□ -1.02
CHD6-201ENST00000309279 POLIQ9UNA4 740 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 STXBP5LQ9Y2K9 1186 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 CDY1Q9Y6F8 540 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 C5orf42Q9H799 3197 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 PLXNA3P51805 1871 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 LINC00854A0A1B0GVQ3 168 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 SYNDIG1LA6NDD5 238 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 PER2O15055 1255 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 ADAM12O43184 909 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 KRT38O76015 456 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 ABLIM3O94929 683 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 CSPG5O95196 566 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 KLRC2P26717 231 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 PON1P27169 355 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 OR1D2P34982 312 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 NRIP1P48552 1158 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 COPB1P53618 953 aaKnown RBP8.69□□□□□ -1.02
CHD6-201ENST00000309279 CSE1LP55060 971 aaKnown RBP8.69□□□□□ -1.02
CHD6-201ENST00000309279 TPD52P55327 224 aaPredicted RBP8.69□□□□□ -1.02
CHD6-201ENST00000309279 INCA1Q0VD86 236 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 GPR17Q13304 367 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 ADAM15Q13444 863 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 EXOC3L4Q17RC7 722 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 C10orf76Q5T2E6 689 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 DPY19L2P1Q6NXN4 242 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 LLGL2Q6P1M3 1020 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 TRIM65Q6PJ69 517 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 ABRAXAS1Q6UWZ7 409 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 GBP6Q6ZN66 633 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 ADGRF2Q8IZF7 708 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 THEM5Q8N1Q8 247 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 EFHBQ8N7U6 833 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 OR10T2Q8NGX3 314 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 ZNF461Q8TAF7 563 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 SLC22A17Q8WUG5 538 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 TATDN2Q93075 761 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 ELMO3Q96BJ8 720 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 MRPL45Q9BRJ2 306 aaKnown RBP8.69□□□□□ -1.02
CHD6-201ENST00000309279 SLC13A1Q9BZW2 595 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 SDCBP2Q9H190 292 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 VPS16Q9H269 839 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 TAB2Q9NYJ8 693 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 GCNT4Q9P109 453 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 ZFATQ9P243 1243 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 NME7Q9Y5B8 376 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 HCFC2Q9Y5Z7 792 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 UNC80Q8N2C7 3258 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 TMCO5BA8MYB1 307 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 TGM5O43548 720 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 GFPT2O94808 682 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 PAPLNO95428 1278 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 SLC4A1P02730 911 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 KRT10P13645 584 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 ATF2P15336 505 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 SLC9A1P19634 815 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 LMO2P25791 158 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 PCSK1P29120 753 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 CA8P35219 290 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 GNL1P36915 607 aaPredicted RBP8.69□□□□□ -1.02
CHD6-201ENST00000309279 CDH8P55286 799 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 MRPS35P82673 323 aaKnown RBP8.69□□□□□ -1.02
CHD6-201ENST00000309279 GCNT1Q02742 428 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 KCNMA1Q12791 1236 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 SMARCB1Q12824 385 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 TPGS2Q68CL5 300 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 FAAH2Q6GMR7 532 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 FAM171BQ6P995 826 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 C1orf228Q6PIY5 440 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 BEND5Q7L4P6 421 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 TBC1D1Q86TI0 1168 aaPredicted RBP8.69□□□□□ -1.02
CHD6-201ENST00000309279 RBM23Q86U06 439 aaKnown RBP8.69□□□□□ -1.02
CHD6-201ENST00000309279 UNC93AQ86WB7 457 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 OSTM1Q86WC4 334 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 TTC39CQ8N584 583 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 TAB3Q8N5C8 712 aaPredicted RBP8.69□□□□□ -1.02
CHD6-201ENST00000309279 VN1R2Q8NFZ6 395 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 HDAC7Q8WUI4 952 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 RBM18Q96H35 190 aaKnown RBP8.69□□□□□ -1.02
CHD6-201ENST00000309279 NT5C1BQ96P26 610 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 PKMYT1Q99640 499 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 BAG1Q99933 345 aaPredicted RBP8.69□□□□□ -1.02
CHD6-201ENST00000309279 CRACR2AQ9BSW2 395 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 ZCWPW1Q9H0M4 648 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 SMYD3Q9H7B4 428 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms