RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 RSPH1Q8WYR4 309 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 CENPIQ92674 756 aaPredicted RBP12.43□□□□□ -0.42
TRIM40-205ENST00000307859 PCED1BQ96HM7 432 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 SUSD3Q96L08 255 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 TBCBQ99426 244 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 FMO2Q99518 471 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 KRT82Q9NSB4 513 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 WHRNQ9P202 907 aa12.43□□□□□ -0.42
TRIM40-205ENST00000307859 TIMM13Q9Y5L4 95 aaPredicted RBP12.43□□□□□ -0.42
TRIM40-205ENST00000307859 PLXNA3P51805 1871 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 MYBPHLA2RUH7 354 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 I3L4J1 428 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 PRPSAP2O60256 369 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 B4GALT3O60512 393 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 HSF2BPO75031 334 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 PPFIA2O75334 1257 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 SYF2O95926 243 aaKnown RBP12.42□□□□□ -0.42
TRIM40-205ENST00000307859 TYMPP19971 482 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 IBSPP21815 317 aaPredicted RBP12.42□□□□□ -0.42
TRIM40-205ENST00000307859 GGCXP38435 758 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 BRCC3P46736 316 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 ATP11AP98196 1134 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 LMNB2Q03252 620 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 ADIGQ0VDE8 80 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 CDO1Q16878 200 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 RAB6CQ53S08 254 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 NOMO2Q5JPE7 1267 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 INTS6LQ5JSJ4 861 aaKnown RBP12.42□□□□□ -0.42
TRIM40-205ENST00000307859 EFHC1Q5JVL4 640 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 SPDYCQ5MJ68 293 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 FAM171BQ6P995 826 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 METTL23Q86XA0 190 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 VSIG1Q86XK7 387 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 FBXO25Q8TCJ0 367 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 URGCPQ8TCY9 931 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 FAM172AQ8WUF8 416 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 PIK3R5Q8WYR1 880 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 ART4Q93070 314 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 NKD2Q969F2 451 aaPredicted RBP12.42□□□□□ -0.42
TRIM40-205ENST00000307859 CCDC114Q96M63 670 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 PKMYT1Q99640 499 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 SH3GL2Q99962 352 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 ACBD6Q9BR61 282 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 MED10Q9BTT4 135 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 DDX23Q9BUQ8 820 aaKnown RBP12.42□□□□□ -0.42
TRIM40-205ENST00000307859 C1QTNF1Q9BXJ1 281 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 FRMD8P1Q9BZ68 369 aaPredicted RBP12.42□□□□□ -0.42
TRIM40-205ENST00000307859 RAB6CQ9H0N0 254 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 ELAC1Q9H777 363 aaKnown RBP12.42□□□□□ -0.42
TRIM40-205ENST00000307859 NGRNQ9NPE2 291 aaKnown RBP12.42□□□□□ -0.42
TRIM40-205ENST00000307859 TMEM161AQ9NX61 479 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 LTBP2Q14767 1821 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 GREB1Q4ZG55 1949 aa12.42□□□□□ -0.42
TRIM40-205ENST00000307859 DAB1O75553 588 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 ITGB1P05556 798 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 CD48P09326 243 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 IVDP26440 423 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 PLTPP55058 493 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 VCPP55072 806 aaKnown RBP12.41□□□□□ -0.42
TRIM40-205ENST00000307859 HDAC4P56524 1084 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 OASLQ15646 514 aaKnown RBP12.41□□□□□ -0.42
TRIM40-205ENST00000307859 UAP1Q16222 522 aaPredicted RBP12.41□□□□□ -0.42
TRIM40-205ENST00000307859 PAN2Q504Q3 1202 aaKnown RBP12.41□□□□□ -0.42
TRIM40-205ENST00000307859 BOLA3Q53S33 107 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 HSP90B2PQ58FF3 399 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 CFAP58Q5T655 872 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 COLGALT2Q8IYK4 626 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 TTC13Q8NBP0 860 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 KCTD6Q8NC69 237 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 ZMIZ2Q8NF64 920 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 SLC35B2Q8TB61 432 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 HSPH1Q92598 858 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 SMARCD1Q96GM5 515 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 ZIM3Q96PE6 472 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 SMOQ99835 787 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 FAM118BQ9BPY3 351 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 CSNK1G1Q9HCP0 422 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRIM40-205ENST00000307859 KANSL3Q9P2N6 904 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 DNPEPQ9ULA0 475 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 PCDHB8Q9UN66 801 aa12.41□□□□□ -0.42
TRIM40-205ENST00000307859 DRG1Q9Y295 367 aaKnown RBP12.41□□□□□ -0.42
TRIM40-205ENST00000307859 ZNF487B1APH4 448 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 MDM4O15151 490 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 TP73O15350 636 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 CST8O60676 142 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 AP1G2O75843 785 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 DDHD2O94830 711 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 FBXO21O94952 628 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 ITGAVP06756 1048 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 KLRC2P26717 231 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 HSD17B3P37058 310 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 MATKP42679 507 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 MAP3K7CLP57077 242 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 MRPS5P82675 430 aaKnown RBP12.4□□□□□ -0.42
TRIM40-205ENST00000307859 MTMR3Q13615 1198 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 BYSLQ13895 437 aaKnown RBP12.4□□□□□ -0.42
TRIM40-205ENST00000307859 PDK2Q15119 407 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 SHHQ15465 462 aa12.4□□□□□ -0.42
TRIM40-205ENST00000307859 RAB41Q5JT25 222 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms