RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 C11orf84Q9BUA3 381 aaPredicted RBP16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 ULBP1Q9BZM6 244 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 ZCWPW1Q9H0M4 648 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 CHST7Q9NS84 486 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 PCDH10Q9P2E7 1040 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 MICAL3Q7RTP6 2002 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 HHLA1C9JL84 531 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 GAS8O95995 478 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 ZBED1O96006 694 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 GBP1P32455 592 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 DRG2P55039 364 aaKnown RBP16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 HDAC4P56524 1084 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 DAOAP59103 153 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 NNTQ13423 1086 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 PDK2Q15119 407 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 PPP1R7Q15435 360 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 NFE2Q16621 373 aaPredicted RBP16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 TAZQ16635 292 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 SLC39A12Q504Y0 691 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 DCAF6Q58WW2 860 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 VARS2Q5ST30 1063 aaKnown RBP16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 ZNF280DQ6N043 979 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 DEFB106AQ8N104 65 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 ATG4AQ8WYN0 398 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 CAVIN3Q969G5 261 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 CALN1Q9BXU9 219 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 RHOBTB2Q9BYZ6 727 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 TMEM30AQ9NV96 361 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 R3HDM2Q9Y2K5 976 aaKnown RBP16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 ABHD14A-ACY1A0A1B0GW23 586 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 OR6C75A6NL08 312 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 CAPN9O14815 690 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 MDM4O15151 490 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 DAPK3O43293 454 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 UPP2O95045 317 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 TIMP1P01033 207 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 GALTP07902 379 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 KCNJ1P48048 391 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 CDH6P55285 790 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 BCAR1P56945 870 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 KRT81Q14533 505 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 CASP8Q14790 479 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 DUPD1Q68J44 220 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 CYP4V2Q6ZWL3 525 aaPredicted RBP16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 CEP57Q86XR8 500 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 SCML4Q8N228 414 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 TTC13Q8NBP0 860 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 IRGQQ8WZA9 623 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 CCDC114Q96M63 670 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 SLC2A13Q96QE2 648 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 MAK16Q9BXY0 300 aaKnown RBP16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 FRMD8P1Q9BZ68 369 aaPredicted RBP16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 ACBD3Q9H3P7 528 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 MARCH5Q9NX47 278 aa16.41■□□□□ 0.22
HERPUD1-201ENST00000300302 MAP2K7O14733 419 aa16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 FGFR3P22607 806 aa16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 ALDH7A1P49419 539 aaKnown RBP16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 SULT1E1P49888 294 aa16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 CTXN3Q4LDR2 81 aa16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 RAB6CQ53S08 254 aa16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 ERMARDQ5T6L9 678 aa16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 FUT10Q6P4F1 479 aa16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 DRICH1Q6PGQ1 229 aaPredicted RBP16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 BBS12Q6ZW61 710 aa16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 SND1Q7KZF4 910 aaKnown RBP eCLIP16.4■□□□□ 0.224e-8■■■□□ 18
HERPUD1-201ENST00000300302 GPRIN1Q7Z2K8 1008 aa16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 VSIG1Q86XK7 387 aa16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 NDRG1Q92597 394 aaKnown RBP16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 FUBP3Q96I24 572 aaKnown RBP eCLIP16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 TRIM62Q9BVG3 475 aa16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 OXCT2Q9BYC2 517 aaPredicted RBP16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 GPR62Q9BZJ7 368 aa16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 RAB6CQ9H0N0 254 aa16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 DPH5Q9H2P9 285 aa16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 PRDM5Q9NQX1 630 aaPredicted RBP16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 FNDC1Q4ZHG4 1894 aaPredicted RBP16.4■□□□□ 0.22
HERPUD1-201ENST00000300302 MKI67P46013 3256 aaKnown RBP16.39■□□□□ 0.22
HERPUD1-201ENST00000300302 CST8O60676 142 aa16.39■□□□□ 0.22
HERPUD1-201ENST00000300302 EFCAB14O75071 495 aa16.39■□□□□ 0.22
HERPUD1-201ENST00000300302 DGKIO75912 1065 aa16.39■□□□□ 0.22
HERPUD1-201ENST00000300302 ENDOD1O94919 500 aa16.39■□□□□ 0.22
HERPUD1-201ENST00000300302 USP17L7P0C7H9 530 aa16.39■□□□□ 0.22
HERPUD1-201ENST00000300302 GRIK1P39086 918 aa16.39■□□□□ 0.22
HERPUD1-201ENST00000300302 ADCY2Q08462 1091 aa16.39■□□□□ 0.22
HERPUD1-201ENST00000300302 MRPL58Q14197 206 aaKnown RBP16.39■□□□□ 0.22
HERPUD1-201ENST00000300302 TRADDQ15628 312 aa16.39■□□□□ 0.22
HERPUD1-201ENST00000300302 DDX42Q86XP3 938 aaKnown RBP eCLIP16.39■□□□□ 0.222e-8■■■■■ 39.1
HERPUD1-201ENST00000300302 RFX6Q8HWS3 928 aa16.39■□□□□ 0.22
HERPUD1-201ENST00000300302 NT5C3BQ969T7 300 aa16.39■□□□□ 0.22
HERPUD1-201ENST00000300302 TRIM31Q9BZY9 425 aa16.39■□□□□ 0.22
HERPUD1-201ENST00000300302 VIPAS39Q9H9C1 493 aa16.39■□□□□ 0.22
HERPUD1-201ENST00000300302 RRN3Q9NYV6 651 aa16.39■□□□□ 0.22
HERPUD1-201ENST00000300302 YJEFN3A6XGL0 299 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 E7ENQ6 273 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 H7C4K7 107 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 LIASO43766 372 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 SASH3O75995 380 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 LTFP02788 710 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms