RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 CD72P21854 359 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 CLCN5P51795 746 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 KPNA1P52294 538 aaPredicted RBP12.72□□□□□ -0.37
HMGB2-201ENST00000296503 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 BST2Q10589 180 aaKnown RBP12.72□□□□□ -0.37
HMGB2-201ENST00000296503 KCNMA1Q12791 1236 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 FKBP15Q5T1M5 1219 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 ASTLQ6HA08 431 aaPredicted RBP12.72□□□□□ -0.37
HMGB2-201ENST00000296503 LCLAT1Q6UWP7 414 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 TPRG1Q6ZUI0 275 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 NYAP1Q6ZVC0 841 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 CCDC186Q7Z3E2 898 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 LRRC4Q9HBW1 653 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 TRPV5Q9NQA5 729 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 SMPD4Q9NXE4 827 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 OBSL1O75147 1896 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 TULP2O00295 520 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 XPO1O14980 1071 aaKnown RBP12.72□□□□□ -0.37
HMGB2-201ENST00000296503 CYP26A1O43174 497 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 OAS1P00973 400 aaKnown RBP12.72□□□□□ -0.37
HMGB2-201ENST00000296503 TKTL1P51854 596 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 STARD6P59095 220 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 SNX30Q5VWJ9 437 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 NUP210Q8TEM1 1887 aaPredicted RBP12.72□□□□□ -0.37
HMGB2-201ENST00000296503 MRFAP1L1Q96HT8 127 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 CCSER2Q9H7U1 834 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 SIX2Q9NPC8 291 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 GTSE1Q9NYZ3 720 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 NAGPAQ9UK23 515 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 ARHGAP26Q9UNA1 814 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 CNTN6Q9UQ52 1028 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 CPQQ9Y646 472 aa12.72□□□□□ -0.37
HMGB2-201ENST00000296503 A0A1W2PQH9 124 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 KANSL1LA0AUZ9 987 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 BECN2A8MW95 431 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 M0QYV0 167 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 LEFTY2O00292 366 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 COCHO43405 550 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 THAP12O43422 761 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 PI15O43692 258 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 ZDHHC11BP0C7U3 371 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 SETSIPP0DME0 302 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 PGFP49763 221 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 ZNF165P49910 485 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 ZNF132P52740 706 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 COPB1P53618 953 aaKnown RBP12.71□□□□□ -0.37
HMGB2-201ENST00000296503 VCPP55072 806 aaKnown RBP12.71□□□□□ -0.37
HMGB2-201ENST00000296503 SLC7A9P82251 487 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 TNK2Q07912 1038 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 MTF1Q14872 753 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 UBXN2BQ14CS0 331 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 NCAPHQ15003 741 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 ZNF852Q6ZMS4 543 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 ZSWIM1Q9BR11 485 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 LSM14BQ9BX40 385 aaKnown RBP12.71□□□□□ -0.37
HMGB2-201ENST00000296503 DUS2Q9NX74 493 aaKnown RBP12.71□□□□□ -0.37
HMGB2-201ENST00000296503 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.71□□□□□ -0.37
HMGB2-201ENST00000296503 SIT1Q9Y3P8 196 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 HCN4Q9Y3Q4 1203 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 USP3Q9Y6I4 520 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 PIAS3Q9Y6X2 628 aa12.71□□□□□ -0.37
HMGB2-201ENST00000296503 ZDBF2Q9HCK1 2354 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 MAN2B1O00754 1011 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 MED7O43513 233 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 TLR5O60602 858 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 RARGP13631 454 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 LCP1P13796 627 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 AOC1P19801 751 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 GNA15P30679 374 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 ATP5C1P36542 298 aaKnown RBP12.7□□□□□ -0.38
HMGB2-201ENST00000296503 IFNAR2P48551 515 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 PSEN1P49768 467 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 RGS7P49802 495 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 RAPGEF1Q13905 1077 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 ZNF77Q15935 545 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 RAB41Q5JT25 222 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 KLHDC7AQ5VTJ3 777 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 CWF19L1Q69YN2 538 aaKnown RBP12.7□□□□□ -0.38
HMGB2-201ENST00000296503 TRIM68Q6AZZ1 485 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 SIX6OS1Q8N1H7 587 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 ZNF606Q8WXB4 792 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 SECISBP2LQ93073 1101 aaKnown RBP12.7□□□□□ -0.38
HMGB2-201ENST00000296503 PCMTD1Q96MG8 357 aaPredicted RBP12.7□□□□□ -0.38
HMGB2-201ENST00000296503 NELL2Q99435 816 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 FAM83CQ9BQN1 747 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 BPIFA3Q9BQP9 254 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 FOXQ1Q9C009 403 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 EBF3Q9H4W6 596 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 C8orf33Q9H7E9 229 aaPredicted RBP12.7□□□□□ -0.38
HMGB2-201ENST00000296503 NMUR1Q9HB89 426 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 CBX8Q9HC52 389 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 LIMA1Q9UHB6 759 aaKnown RBP12.7□□□□□ -0.38
HMGB2-201ENST00000296503 NUDT5Q9UKK9 219 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 MRPS17Q9Y2R5 130 aaKnown RBP12.7□□□□□ -0.38
HMGB2-201ENST00000296503 FAM170BA6NMN3 283 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 ARNTLO00327 626 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 FOXN3O00409 490 aaPredicted RBP12.7□□□□□ -0.38
HMGB2-201ENST00000296503 OLFM2O95897 454 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 TBX18O95935 607 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 ZBED1O96006 694 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms