RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 TLCD1Q96CP7 247 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 SIAEQ9HAT2 523 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 NDUFB9Q9Y6M9 179 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 PRPF3O43395 683 aaKnown RBP12.12□□□□□ -0.47
SNIP1-201ENST00000296215 NMT2O60551 498 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 UBL4AP11441 157 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 ITGA4P13612 1032 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 IL1R1P14778 569 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 PSMB9P28065 219 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 INSCQ1MX18 579 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 SLC30A10Q6XR72 485 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 PCGF5Q86SE9 256 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 ADCY4Q8NFM4 1077 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 C12orf43Q96C57 262 aaKnown RBP12.12□□□□□ -0.47
SNIP1-201ENST00000296215 SETDB2Q96T68 719 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 MAP3K14Q99558 947 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 ZFYVE28Q9HCC9 887 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.12□□□□□ -0.47
SNIP1-201ENST00000296215 TARBP1Q13395 1621 aaKnown RBP12.11□□□□□ -0.47
SNIP1-201ENST00000296215 SAGE2PA6NJ88 616 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 AQP9O43315 295 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 FOXD2O60548 495 aaPredicted RBP12.11□□□□□ -0.47
SNIP1-201ENST00000296215 LGALS3BPQ08380 585 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 NR5A1Q13285 461 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 TGFBIQ15582 683 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 USP13Q92995 863 aaPredicted RBP12.11□□□□□ -0.47
SNIP1-201ENST00000296215 DHRS9Q9BPW9 319 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 TMLHEQ9NVH6 421 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 CD274Q9NZQ7 290 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 A0A1W2PQJ5 194 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 A8MU76 341 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 FAM25EA8MYX2 175 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 G3V3G9 751 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 POLR2CP19387 275 aaPredicted RBP12.11□□□□□ -0.47
SNIP1-201ENST00000296215 NLRP11P59045 1033 aaKnown RBP12.11□□□□□ -0.47
SNIP1-201ENST00000296215 LSM3P62310 102 aaKnown RBP12.11□□□□□ -0.47
SNIP1-201ENST00000296215 ANGPT1Q15389 498 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 DCAF8Q5TAQ9 597 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 ARSKQ6UWY0 536 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 RORBQ92753 470 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 CLPTM1LQ96KA5 538 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 FAM111AQ96PZ2 611 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 PDGFDQ9GZP0 370 aaPredicted RBP12.11□□□□□ -0.47
SNIP1-201ENST00000296215 EXOSC4Q9NPD3 245 aaKnown RBP12.11□□□□□ -0.47
SNIP1-201ENST00000296215 MAT2BQ9NZL9 334 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 ING4Q9UNL4 249 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 SHANK2Q9UPX8 1470 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 FAM13AO94988 1023 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 H6PDO95479 791 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 HOXA10P31260 410 aaPredicted RBP12.11□□□□□ -0.47
SNIP1-201ENST00000296215 ETFBP38117 255 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 CASP2P42575 452 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 KCNJ1P48048 391 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 AP3M2P53677 418 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 OR2B6P58173 313 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 TAP1Q03518 808 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 PAGE2Q7Z2X7 111 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 LSMEM1Q8N8F7 131 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 EXD1Q8NHP7 514 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 SCFD2Q8WU76 684 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 INTS2Q9H0H0 1204 aaKnown RBP12.11□□□□□ -0.47
SNIP1-201ENST00000296215 INIPQ9NRY2 104 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 NUP50Q9UKX7 468 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 PSMD13Q9UNM6 376 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 PRAG1Q86YV5 1406 aa12.11□□□□□ -0.47
SNIP1-201ENST00000296215 TRIM49D1C9J1S8 452 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 DLATP10515 647 aaKnown RBP12.1□□□□□ -0.47
SNIP1-201ENST00000296215 CSNK2BP67870 215 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 PCDH1Q08174 1060 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 CAMK2BQ13554 666 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 CHI3L2Q15782 390 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 KIAA0408Q6ZU52 694 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 EFL1Q7Z2Z2 1120 aaKnown RBP12.1□□□□□ -0.47
SNIP1-201ENST00000296215 DDIASQ8IXT1 998 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 SFRP1Q8N474 314 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 BPIFB6Q8NFQ5 453 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 FAM172AQ8WUF8 416 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 OTULINQ96BN8 352 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 C18orf8Q96DM3 657 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 ADPRHL2Q9NX46 363 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 LRP2BPQ9P2M1 347 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 POU2F3Q9UKI9 436 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 FIS1Q9Y3D6 152 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 PCDH11XQ9BZA7 1347 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 EDF1O60869 148 aaKnown RBP12.1□□□□□ -0.47
SNIP1-201ENST00000296215 KCNA5P22460 613 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 KLK7P49862 253 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 MKRN4PQ13434 485 aaPredicted RBP12.1□□□□□ -0.47
SNIP1-201ENST00000296215 ATP13A5Q4VNC0 1218 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 ZNF425Q6IV72 752 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 ALKBH2Q6NS38 261 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 TNIP3Q96KP6 325 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 RMND5AQ9H871 391 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 FBXO6Q9NRD1 293 aaPredicted RBP12.1□□□□□ -0.47
SNIP1-201ENST00000296215 IGF1RP08069 1367 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 RTL9Q8NET4 1388 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 A0A1W2PPW3 197 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 KIF28PB7ZC32 967 aa12.1□□□□□ -0.47
SNIP1-201ENST00000296215 THRAP10827 490 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms