RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 DPY19L2Q6NUT2 758 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 KYAT3Q6YP21 454 aaKnown RBP10.66□□□□□ -0.7
LMX1A-201ENST00000294816 SCARA5Q6ZMJ2 495 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 SH3BP5LQ7L8J4 393 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 RBM12BQ8IXT5 1001 aaKnown RBP10.66□□□□□ -0.7
LMX1A-201ENST00000294816 EMC1Q8N766 993 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 CATSPER2Q96P56 530 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 MRPL1Q9BYD6 325 aaKnown RBP10.66□□□□□ -0.7
LMX1A-201ENST00000294816 COA1Q9GZY4 146 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 SBF2Q86WG5 1849 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 A0A0J9YVX5 310 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 CD19P15391 556 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 FDFT1P37268 417 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 ALDH1A3P47895 512 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 TBL3Q12788 808 aaKnown RBP10.66□□□□□ -0.7
LMX1A-201ENST00000294816 TLR1Q15399 786 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 CYTH1Q15438 398 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 HSP90AA5PQ58FG0 334 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 KLC3Q6P597 504 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 LDHDQ86WU2 507 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 CDH22Q9UJ99 828 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 AK5Q9Y6K8 562 aa10.66□□□□□ -0.7
LMX1A-201ENST00000294816 ITM2AO43736 263 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 DKC1O60832 514 aaKnown RBP eCLIP10.65□□□□□ -0.7
LMX1A-201ENST00000294816 BBOX1O75936 387 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 CALB1P05937 261 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 MSX2P35548 267 aaPredicted RBP10.65□□□□□ -0.7
LMX1A-201ENST00000294816 NLRP11P59045 1033 aaKnown RBP10.65□□□□□ -0.7
LMX1A-201ENST00000294816 MRPS5P82675 430 aaKnown RBP10.65□□□□□ -0.7
LMX1A-201ENST00000294816 TBCCQ15814 346 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 VWA5B1Q5TIE3 1220 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 FAM91A1Q658Y4 838 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 UGT2A3Q6UWM9 527 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 TMC7Q7Z402 723 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 RAB3IL1Q8TBN0 382 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 AGR3Q8TD06 166 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 VCPIP1Q96JH7 1222 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 Q9H521 79 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 FAM198AQ9UFP1 575 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 PCDHGB4Q9UN71 923 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 POMPQ9Y244 141 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 PCDHGB5Q9Y5G0 923 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 ABCA3Q99758 1704 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 F5H423 210 aaPredicted RBP10.65□□□□□ -0.7
LMX1A-201ENST00000294816 VILLO15195 856 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 ZC3H11AO75152 810 aaKnown RBP eCLIP10.65□□□□□ -0.7
LMX1A-201ENST00000294816 SUPT3HO75486 399 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 MMP8P22894 467 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 CPOXP36551 454 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 SNRPFP62306 86 aaKnown RBP10.65□□□□□ -0.7
LMX1A-201ENST00000294816 MTMR1Q13613 665 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 PIGHQ14442 188 aaPredicted RBP10.65□□□□□ -0.7
LMX1A-201ENST00000294816 HADHQ16836 314 aaKnown RBP10.65□□□□□ -0.7
LMX1A-201ENST00000294816 FASTKD1Q53R41 847 aaKnown RBP10.65□□□□□ -0.7
LMX1A-201ENST00000294816 GPAT2Q6NUI2 795 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 FAM196AQ6ZSG2 479 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 TTC13Q8NBP0 860 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 DCUN1D1Q96GG9 259 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 LRGUKQ96M69 825 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 IMPG2Q9BZV3 1241 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 USP29Q9HBJ7 922 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 ZDHHC7Q9NXF8 308 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 FAF1Q9UNN5 650 aaPredicted RBP10.65□□□□□ -0.7
LMX1A-201ENST00000294816 TDRKHQ9Y2W6 561 aaKnown RBP10.65□□□□□ -0.7
LMX1A-201ENST00000294816 NUB1Q9Y5A7 615 aa10.65□□□□□ -0.7
LMX1A-201ENST00000294816 ASTN2O75129 1339 aaPredicted RBP10.65□□□□□ -0.7
LMX1A-201ENST00000294816 TESPA1A2RU30 521 aaPredicted RBP10.65□□□□□ -0.71
LMX1A-201ENST00000294816 KLF11O14901 512 aa10.65□□□□□ -0.71
LMX1A-201ENST00000294816 CFLARO15519 480 aa10.65□□□□□ -0.71
LMX1A-201ENST00000294816 KRT38O76015 456 aa10.65□□□□□ -0.71
LMX1A-201ENST00000294816 SERPINB2P05120 415 aa10.65□□□□□ -0.71
LMX1A-201ENST00000294816 APRTP07741 180 aa10.65□□□□□ -0.71
LMX1A-201ENST00000294816 SRGAP2CP0DJJ0 459 aa10.65□□□□□ -0.71
LMX1A-201ENST00000294816 SRGAP2BP0DMP2 458 aa10.65□□□□□ -0.71
LMX1A-201ENST00000294816 ACO1P21399 889 aaKnown RBP10.65□□□□□ -0.71
LMX1A-201ENST00000294816 ROR1Q01973 937 aa10.65□□□□□ -0.71
LMX1A-201ENST00000294816 ITGA9Q13797 1035 aa10.65□□□□□ -0.71
LMX1A-201ENST00000294816 GK3PQ14409 553 aa10.65□□□□□ -0.71
LMX1A-201ENST00000294816 TAF5Q15542 800 aa10.65□□□□□ -0.71
LMX1A-201ENST00000294816 PPP6R3Q5H9R7 873 aaPredicted RBP10.65□□□□□ -0.71
LMX1A-201ENST00000294816 ZNF513Q8N8E2 541 aaPredicted RBP10.65□□□□□ -0.71
LMX1A-201ENST00000294816 PPP1R36Q96LQ0 422 aa10.65□□□□□ -0.71
LMX1A-201ENST00000294816 PRICKLE1Q96MT3 831 aaPredicted RBP10.65□□□□□ -0.71
LMX1A-201ENST00000294816 CCPG1Q9ULG6 757 aa10.65□□□□□ -0.71
LMX1A-201ENST00000294816 TNRC6CQ9HCJ0 1690 aaKnown RBP10.65□□□□□ -0.71
LMX1A-201ENST00000294816 MYH9P35579 1960 aaKnown RBP10.65□□□□□ -0.71
LMX1A-201ENST00000294816 PTPRJQ12913 1337 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 WDR64B1ANS9 1081 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 E7ESA3 106 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 ATP9BO43861 1147 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 KLHL2O95198 593 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 BPGMP07738 259 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 SMIM18P0DKX4 95 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 IL1R2P27930 398 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 RFC1P35251 1148 aaPredicted RBP10.64□□□□□ -0.71
LMX1A-201ENST00000294816 MMRN1Q13201 1228 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 KRT81Q14533 505 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 MYLK3Q32MK0 819 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 ZACNQ401N2 412 aa10.64□□□□□ -0.71
LMX1A-201ENST00000294816 TSHZ1Q6ZSZ6 1077 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms