RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 SNCBQ16143 134 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 SKIDA1Q1XH10 827 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 DCAF4L1Q3SXM0 396 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 SEZ6Q53EL9 994 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 LRRC38Q5VT99 294 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 CXCL17Q6UXB2 119 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 UNC5DQ6UXZ4 953 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 C14orf80Q86SX3 495 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 CCDC105Q8IYK2 499 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 KATNAL2Q8IYT4 538 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 PPP1R14CQ8TAE6 165 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 TRAPPC12Q8WVT3 735 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 TCF12Q99081 682 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 C11orf70Q9BRQ4 267 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 BCO2Q9BYV7 579 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 WDR35Q9P2L0 1181 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 R3HDM2Q9Y2K5 976 aaKnown RBP7.91□□□□□ -1.14
TRIM42-201ENST00000286349 C2CD2Q9Y426 696 aa7.91□□□□□ -1.14
TRIM42-201ENST00000286349 HTR3EA5X5Y0 456 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 A6NHS1 94 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 NDC80O14777 642 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 STAMBPO95630 424 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 MYZAPP0CAP1 466 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 STAG3L1P0CL83 205 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 HSD17B3P37058 310 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 PTGIRP43119 386 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 ASPAP45381 313 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 MARCKSL1P49006 195 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 CPT1AP50416 773 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 COPS2P61201 443 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 CAV1Q03135 178 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 LMNB2Q03252 620 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 PIGHQ14442 188 aaPredicted RBP7.9□□□□□ -1.14
TRIM42-201ENST00000286349 PLEKHG6Q3KR16 790 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 CCDC153Q494R4 210 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 SGO2Q562F6 1265 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 NEPROQ6NW34 567 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 TMEM53Q6P2H8 277 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 TMC3Q7Z5M5 1100 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 LSMEM2Q8N112 164 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 VPS52Q8N1B4 723 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 LRRC43Q8N309 656 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 ARFGAP2Q8N6H7 521 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 EXD1Q8NHP7 514 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 BTBD6Q96KE9 485 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 CELF4Q9BZC1 486 aaKnown RBP7.9□□□□□ -1.14
TRIM42-201ENST00000286349 MIS12Q9H081 205 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 XYLT2Q9H1B5 865 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 ERVK-5Q9HDB9 667 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 ITGA11Q9UKX5 1188 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 PLAAQ9Y263 795 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 DERAQ9Y315 318 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 CAPN7Q9Y6W3 813 aa7.9□□□□□ -1.14
TRIM42-201ENST00000286349 A0A087WZ62 844 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 A0A1W2PRQ8 180 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 B4GALT5O43286 388 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 GAS8O95995 478 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 F2P00734 622 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 ATP5DP30049 168 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 CCT5P48643 541 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 ACLYP53396 1101 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 TUBA4AP68366 448 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 BASP1P80723 227 aaKnown RBP7.9□□□□□ -1.15
TRIM42-201ENST00000286349 SKOR1P84550 965 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 CALCOCO2Q13137 446 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 GRIK4Q16099 956 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 AMHR2Q16671 573 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 DNAJC24Q6P3W2 148 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 CEP128Q6ZU80 1094 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 RCOR2Q8IZ40 523 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 PAF1Q8N7H5 531 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 BBOF1Q8ND07 529 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 CCHCR1Q8TD31 782 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 NLRP7Q8WX94 980 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 RIN2Q8WYP3 895 aaPredicted RBP7.9□□□□□ -1.15
TRIM42-201ENST00000286349 C18orf8Q96DM3 657 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 PAWRQ96IZ0 340 aaKnown RBP7.9□□□□□ -1.15
TRIM42-201ENST00000286349 ATP6V1G3Q96LB4 118 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 CEP295NLQ96MC4 621 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 FDXACB1Q9BRP7 624 aaPredicted RBP7.9□□□□□ -1.15
TRIM42-201ENST00000286349 DPH5Q9H2P9 285 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 PDZD7Q9H5P4 517 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 PLEKHA5Q9HAU0 1116 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 DDX56Q9NY93 547 aaKnown RBP7.9□□□□□ -1.15
TRIM42-201ENST00000286349 CLIC5Q9NZA1 410 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 CHORDC1Q9UHD1 332 aaPredicted RBP7.9□□□□□ -1.15
TRIM42-201ENST00000286349 NR2E1Q9Y466 385 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 UMODL1Q5DID0 1318 aa7.9□□□□□ -1.15
TRIM42-201ENST00000286349 CCDC162PA2VCL2 907 aa7.89□□□□□ -1.15
TRIM42-201ENST00000286349 KPNA6O60684 536 aa7.89□□□□□ -1.15
TRIM42-201ENST00000286349 CXCL8P10145 99 aa7.89□□□□□ -1.15
TRIM42-201ENST00000286349 RARAP10276 462 aa7.89□□□□□ -1.15
TRIM42-201ENST00000286349 CD58P19256 250 aa7.89□□□□□ -1.15
TRIM42-201ENST00000286349 PSEN2P49810 448 aa7.89□□□□□ -1.15
TRIM42-201ENST00000286349 ZNF200P98182 395 aaPredicted RBP7.89□□□□□ -1.15
TRIM42-201ENST00000286349 DHX9Q08211 1270 aaKnown RBP7.89□□□□□ -1.15
TRIM42-201ENST00000286349 SIX1Q15475 284 aaPredicted RBP7.89□□□□□ -1.15
TRIM42-201ENST00000286349 BCL2A1Q16548 175 aa7.89□□□□□ -1.15
TRIM42-201ENST00000286349 MARCH8Q5T0T0 291 aa7.89□□□□□ -1.15
TRIM42-201ENST00000286349 EEF1DP3Q658K8 133 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms