RNA–Protein interactions for RNA: ENST00000284273.5

UBASH3B-201, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBASH3B, Length 6,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-201ENST00000284273 PHF21BQ96EK2 531 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 TPD52L3Q96J77 140 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 DNAJC16Q9Y2G8 782 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 CDH8P55286 799 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 CCDC144BQ3MJ40 725 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 FBXL19Q6PCT2 694 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 FBXO38Q6PIJ6 1188 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 IGDCC4Q8TDY8 1250 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 ASZ1Q8WWH4 475 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 BPIFA1Q9NP55 256 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 GULP1Q9UBP9 304 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 CDK12Q9NYV4 1490 aaPredicted RBP12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 MAPRE2Q15555 327 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 INSCQ1MX18 579 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 ZNF484Q5JVG2 852 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 DDI2Q5TDH0 399 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 METTL16Q86W50 562 aaKnown RBP12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 TMEM199Q8N511 208 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 C2orf73Q8N5S3 287 aaPredicted RBP12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 OSBPL8Q9BZF1 889 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 XYLBO75191 536 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 SOAT2O75908 522 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 NOS3P29474 1203 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 FLT3P36888 993 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 TTLL9Q3SXZ7 439 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 INTS5Q6P9B9 1019 aaKnown RBP12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 OTOP2Q7RTS6 562 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 CBWD1Q9BRT8 395 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 CALCAP01258 141 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 SPRP35270 261 aaPredicted RBP12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 CSHL1Q14406 222 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 SETMARQ53H47 684 aaPredicted RBP12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 TXNRD3Q86VQ6 643 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 THAP2Q9H0W7 228 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 MRPL17Q9NRX2 175 aaKnown RBP12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 RPS6KL1Q9Y6S9 549 aa12.25□□□□□ -0.45
UBASH3B-201ENST00000284273 RASSF10A6NK89 507 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 RBP3P10745 1247 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 TGFB2P61812 414 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 EIF2B5Q13144 721 aaKnown RBP12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 C16orf46Q6P387 395 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 CYP20A1Q6UW02 462 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 SUSD6Q92537 303 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 CNBD2Q96M20 576 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 PRPF18Q99633 342 aaKnown RBP12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 MRPL40Q9NQ50 206 aaKnown RBP12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 PCDHB5Q9Y5E4 795 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 ZNF609O15014 1411 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 ARHGAP31Q2M1Z3 1444 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 PRKAG1P54619 331 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 LRRN4Q8WUT4 740 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 REXO4Q9GZR2 422 aaKnown RBP12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 ABCG8Q9H221 673 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 PARVBQ9HBI1 364 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 PDGFCQ9NRA1 345 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 PDS5AQ29RF7 1337 aaKnown RBP12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 O00370 1275 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 ARHGEF9O43307 516 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 PHF2O75151 1096 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 PLEKP08567 350 aaPredicted RBP12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 CHN1P15882 459 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 CCNG1P51959 295 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 LEMD2Q8NC56 503 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 HELQQ8TDG4 1101 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 SKA1Q96BD8 255 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 ATP13A1Q9HD20 1204 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 IL1BP01584 269 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 PSEN2P49810 448 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 TBX4P57082 545 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 BRSK2Q8IWQ3 736 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 CENPLQ8N0S6 344 aaPredicted RBP12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 OSBPL1AQ9BXW6 950 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 UBXN6Q9BZV1 441 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 WDR35Q9P2L0 1181 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 HES2Q9Y543 173 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 SPATA31E1Q6ZUB1 1445 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 SLC16A3O15427 465 aaKnown RBP12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 MRPS15P82914 257 aaKnown RBP12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 DHX34Q14147 1143 aaKnown RBP12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 TEDDM1Q5T9Z0 273 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 SLC47A2Q86VL8 602 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 VPS37AQ8NEZ2 397 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 CALML6Q8TD86 181 aa12.24□□□□□ -0.45
UBASH3B-201ENST00000284273 NR5A2O00482 541 aa12.23□□□□□ -0.45
UBASH3B-201ENST00000284273 TBX3O15119 743 aa12.23□□□□□ -0.45
UBASH3B-201ENST00000284273 CCL16O15467 120 aa12.23□□□□□ -0.45
UBASH3B-201ENST00000284273 BUD23O43709 281 aaKnown RBP12.23□□□□□ -0.45
UBASH3B-201ENST00000284273 MTA2O94776 668 aa12.23□□□□□ -0.45
UBASH3B-201ENST00000284273 SERPINB3P29508 390 aa12.23□□□□□ -0.45
UBASH3B-201ENST00000284273 HSPA9P38646 679 aaKnown RBP12.23□□□□□ -0.45
UBASH3B-201ENST00000284273 TAF13Q15543 124 aa12.23□□□□□ -0.45
UBASH3B-201ENST00000284273 SCUBE3Q8IX30 993 aa12.23□□□□□ -0.45
UBASH3B-201ENST00000284273 YY1AP1Q9H869 796 aa12.23□□□□□ -0.45
UBASH3B-201ENST00000284273 VANGL2Q9ULK5 521 aa12.23□□□□□ -0.45
UBASH3B-201ENST00000284273 EIF3LQ9Y262 564 aaKnown RBP12.23□□□□□ -0.45
UBASH3B-201ENST00000284273 FAM107AO95990 144 aa12.23□□□□□ -0.45
UBASH3B-201ENST00000284273 KRT8P05787 483 aa12.23□□□□□ -0.45
UBASH3B-201ENST00000284273 CYP2F1P24903 491 aa12.23□□□□□ -0.45
UBASH3B-201ENST00000284273 NPTX2P47972 431 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms