RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 SDC4P31431 198 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 FOXN2P32314 431 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 HDAC4P56524 1084 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 SPARCL1Q14515 664 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 PDK4Q16654 411 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 RNF43Q68DV7 783 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 NPNTQ6UXI9 565 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 DPH6Q7L8W6 267 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 ANKMY2Q8IV38 441 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 FAM172AQ8WUF8 416 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 DCAKDQ8WVC6 231 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 KBTBD7Q8WVZ9 684 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 CDHR5Q9HBB8 845 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 MLXIPLQ9NP71 852 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 PNPLA8Q9NP80 782 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 ABCF3Q9NUQ8 709 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 HAUS2Q9NVX0 235 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 PAK5Q9P286 719 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 HESX1Q9UBX0 185 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 STARD13Q9Y3M8 1113 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 FAM155BO75949 473 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 RECQL4O94761 1208 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 CD4P01730 458 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 DESP17661 470 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 KRT15P19012 456 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 SSTR1P30872 391 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 PNPLA4P41247 253 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 RGS7P49802 495 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 BCAT1P54687 386 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 CCDC15Q0P6D6 951 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 BST2Q10589 180 aaKnown RBP7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 KRT81Q14533 505 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 DPYSL2Q16555 572 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 HP1BP3Q5SSJ5 553 aaPredicted RBP7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 MORN1Q5T089 497 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 SPRYD7Q5W111 196 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 DARS2Q6PI48 645 aaKnown RBP7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 C4orf22Q6V702 233 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 C3orf62Q6ZUJ4 267 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 FUKQ8N0W3 1084 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 ANKRD52Q8NB46 1076 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 PCDH19Q8TAB3 1148 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 FBF1Q8TES7 1133 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 C18orf25Q96B23 403 aaPredicted RBP7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 PAFAH2Q99487 392 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 SNRNP25Q9BV90 132 aaKnown RBP7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 NXF3Q9H4D5 531 aaKnown RBP7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 SLC5A4Q9NY91 659 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 TSC2P49815 1807 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 DCAF8L1A6NGE4 600 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 PIK3R2O00459 728 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 GRAP2O75791 330 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 ZWINTO95229 277 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 ATP2A2P16615 1042 aaKnown RBP7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 HOXC8P31273 242 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 RPA3P35244 121 aaPredicted RBP7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 CDO1Q16878 200 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 FBXO47Q5MNV8 452 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 SCUBE3Q8IX30 993 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 ALKBH8Q96BT7 664 aaKnown RBP7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 ZNF560Q96MR9 790 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 CYTH2Q99418 400 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 OSMRQ99650 979 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 PTPN18Q99952 460 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 FAM49AQ9H0Q0 323 aaPredicted RBP7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 KIF9Q9HAQ2 790 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 RXFP1Q9HBX9 757 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 FAM49BQ9NUQ9 324 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 GRID1Q9ULK0 1009 aa7.55□□□□□ -1.2
SPARCL1-201ENST00000282470 CFAP73A6NFT4 308 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 SPAG7O75391 227 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 C1QAP02745 245 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 CYP2C9P11712 490 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 ACADSBP45954 432 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 NR2C2P49116 596 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 BCAR1P56945 870 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 BASP1P80723 227 aaKnown RBP7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 ATP11AP98196 1134 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 TMEM62Q0P6H9 643 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 HIC1Q14526 733 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 EFTUD2Q15029 972 aaKnown RBP eCLIP7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 SNX17Q15036 470 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 UBXN11Q5T124 520 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 DPEP3Q9H4B8 488 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 NGRNQ9NPE2 291 aaKnown RBP7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 KLC4Q9NSK0 619 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 HES2Q9Y543 173 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 SMIM28A0A1B0GU29 152 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 A0A1W2PPM1 405 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 A8MXQ7 604 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 KPNA7A9QM74 516 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 H7C0C1 242 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 SPTLC1O15269 473 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 TM9SF1O15321 606 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 XPOTO43592 962 aaKnown RBP7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 FGFR1P11362 822 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 ZFXP17010 805 aaPredicted RBP7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 KRT4P19013 534 aa7.54□□□□□ -1.2
SPARCL1-201ENST00000282470 L1CAMP32004 1257 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms