RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 ECI2O75521 394 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 LRG1P02750 347 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 SP9P0CG40 484 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 MCF2P10911 925 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 RPL9P32969 192 aaKnown RBP10.55□□□□□ -0.72
LRTM1-201ENST00000273286 CLCNKBP51801 687 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 ZNF174Q15697 407 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 MLF2Q15773 248 aaPredicted RBP10.55□□□□□ -0.72
LRTM1-201ENST00000273286 CLEC16AQ2KHT3 1053 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 ZNF568Q3ZCX4 644 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 XKR4Q5GH76 650 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 SPECC1Q5M775 1068 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 KRT79Q5XKE5 535 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 EEF1DP3Q658K8 133 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 PARM1Q6UWI2 310 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 SPOCD1Q6ZMY3 1216 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 CILP2Q8IUL8 1156 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 IGSF22Q8N9C0 903 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 LEMD2Q8NC56 503 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 RUBCNQ92622 972 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 LRRC3Q9BY71 257 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 RNF32Q9H0A6 362 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 CACNG4Q9UBN1 327 aa10.55□□□□□ -0.72
LRTM1-201ENST00000273286 MRPS23Q9Y3D9 190 aaKnown RBP10.55□□□□□ -0.72
LRTM1-201ENST00000273286 OTOGLQ3ZCN5 2332 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 VWA8A3KMH1 1905 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 SMIM28A0A1B0GU29 152 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 CCDC169A6NNP5 214 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 ZNF197O14709 1029 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 LAMTOR5O43504 91 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 KINO60870 393 aaKnown RBP10.54□□□□□ -0.72
LRTM1-201ENST00000273286 DTNBO60941 627 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 DCNP07585 359 aaKnown RBP10.54□□□□□ -0.72
LRTM1-201ENST00000273286 ATF2P15336 505 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 PTPN2P17706 415 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 SCP2P22307 547 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 EIF4A3P38919 411 aaKnown RBP10.54□□□□□ -0.72
LRTM1-201ENST00000273286 PRPHP41219 470 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 GUCY1B3Q02153 619 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 SLC44A4Q53GD3 710 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 GLRA4Q5JXX5 417 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 ZBTB41Q5SVQ8 909 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 TPGS2Q68CL5 300 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 ALKAL1Q6UXT8 129 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 TCEAL8Q8IYN2 117 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 ELMOD1Q8N336 334 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 GIPC2Q8TF65 315 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 DNASE1L2Q92874 299 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 ACAP3Q96P50 834 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 ACO2Q99798 780 aaKnown RBP10.54□□□□□ -0.72
LRTM1-201ENST00000273286 IER2Q9BTL4 223 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 DDX19AQ9NUU7 478 aaKnown RBP10.54□□□□□ -0.72
LRTM1-201ENST00000273286 KCND2Q9NZV8 630 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 ARHGAP28Q9P2N2 729 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 NUB1Q9Y5A7 615 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 PCDHB14Q9Y5E9 798 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 MIA3Q5JRA6 1907 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 MYH15Q9Y2K3 1946 aa10.54□□□□□ -0.72
LRTM1-201ENST00000273286 FANCMQ8IYD8 2048 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 CACNA1IQ9P0X4 2223 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 H0YCG3 227 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 PODXLO00592 558 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 PRRG1O14668 218 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 ADAM12O43184 909 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 ABLIM3O94929 683 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 RHOP08100 348 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 KCNE1P15382 129 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 U2AF2P26368 475 aaKnown RBP eCLIP10.53□□□□□ -0.72
LRTM1-201ENST00000273286 TKTP29401 623 aaKnown RBP10.53□□□□□ -0.72
LRTM1-201ENST00000273286 RPS9P46781 194 aaKnown RBP10.53□□□□□ -0.72
LRTM1-201ENST00000273286 NPTX2P47972 431 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 PEX3P56589 373 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 NTHL1P78549 312 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 ROR1Q01973 937 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 STRN3Q13033 797 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 SNW1Q13573 536 aaKnown RBP10.53□□□□□ -0.72
LRTM1-201ENST00000273286 PPP2R5DQ14738 602 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 ARSHQ5FYA8 562 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 NT5DC1Q5TFE4 455 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 ZNF852Q6ZMS4 543 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 CCDC83Q8IWF9 413 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 OXR1Q8N573 874 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 APPL2Q8NEU8 664 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 SECISBP2LQ93073 1101 aaKnown RBP10.53□□□□□ -0.72
LRTM1-201ENST00000273286 ELSPBP1Q96BH3 223 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 NTPCRQ9BSD7 190 aaKnown RBP10.53□□□□□ -0.72
LRTM1-201ENST00000273286 TCHPQ9BT92 498 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 KIFC3Q9BVG8 833 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 FAM126AQ9BYI3 521 aaPredicted RBP10.53□□□□□ -0.72
LRTM1-201ENST00000273286 CDT1Q9H211 546 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 SP110Q9HB58 689 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 PTPRHQ9HD43 1115 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 KMT5AQ9NQR1 393 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 DNMT3BQ9UBC3 853 aaKnown RBP10.53□□□□□ -0.72
LRTM1-201ENST00000273286 PCDHGA2Q9Y5H1 932 aa10.53□□□□□ -0.72
LRTM1-201ENST00000273286 MAN2B1O00754 1011 aa10.52□□□□□ -0.73
LRTM1-201ENST00000273286 RGS13O14921 159 aa10.52□□□□□ -0.73
LRTM1-201ENST00000273286 TOM1L1O75674 476 aa10.52□□□□□ -0.73
LRTM1-201ENST00000273286 EDN1P05305 212 aa10.52□□□□□ -0.73
LRTM1-201ENST00000273286 C1QTNF9P0C862 333 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms