RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 ZNF229Q9UJW7 825 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 ATP11BQ9Y2G3 1177 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 POLBP06746 335 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 MYL4P12829 197 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 TCF3P15923 654 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 CDH24Q86UP0 819 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 C12orf50Q8NA57 414 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 ASB2Q96Q27 587 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 DUSP9Q99956 384 aaKnown RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 TRIM54Q9BYV2 358 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 ELP3Q9H9T3 547 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 SAYSD1Q9NPB0 183 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 ZFATQ9P243 1243 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 MAPRE3Q9UPY8 281 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 ANKRD6Q9Y2G4 727 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 PCDHA3Q9Y5H8 950 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 FAM170AA1A519 330 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 B4GALT4O60513 344 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 TPI1P60174 286 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 GUCY1A3Q02108 690 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 FOXD4Q12950 439 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 XRCC4Q13426 336 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 LBX2Q6XYB7 198 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 TNIP2Q8NFZ5 429 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 HELQQ8TDG4 1101 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 CASP10Q92851 521 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 NGRNQ9NPE2 291 aaKnown RBP8.53□□□□□ -1.04
COL6A5-201ENST00000265379 MOSPD1Q9UJG1 213 aa8.53□□□□□ -1.04
COL6A5-201ENST00000265379 HNRNPRO43390 633 aaKnown RBP8.52□□□□□ -1.04
COL6A5-201ENST00000265379 MAPK9P45984 424 aa8.52□□□□□ -1.04
COL6A5-201ENST00000265379 ABCE1P61221 599 aaKnown RBP8.52□□□□□ -1.04
COL6A5-201ENST00000265379 NSUN2Q08J23 767 aaKnown RBP eCLIP8.52□□□□□ -1.04
COL6A5-201ENST00000265379 DCAF6Q58WW2 860 aa8.52□□□□□ -1.04
COL6A5-201ENST00000265379 RABGAP1LQ5R372 815 aa8.52□□□□□ -1.04
COL6A5-201ENST00000265379 SCARA3Q6AZY7 606 aa8.52□□□□□ -1.04
COL6A5-201ENST00000265379 SLITRK1Q96PX8 696 aa8.52□□□□□ -1.04
COL6A5-201ENST00000265379 COLEC11Q9BWP8 271 aa8.52□□□□□ -1.04
COL6A5-201ENST00000265379 CCDC189A1A4V9 331 aa8.52□□□□□ -1.04
COL6A5-201ENST00000265379 TRDMT1O14717 391 aaKnown RBP8.52□□□□□ -1.04
COL6A5-201ENST00000265379 CYP26A1O43174 497 aa8.52□□□□□ -1.04
COL6A5-201ENST00000265379 CD58P19256 250 aa8.52□□□□□ -1.04
COL6A5-201ENST00000265379 PTPN7P35236 360 aa8.52□□□□□ -1.04
COL6A5-201ENST00000265379 COILP38432 576 aaPredicted RBP8.52□□□□□ -1.04
COL6A5-201ENST00000265379 CDK7P50613 346 aa8.52□□□□□ -1.04
COL6A5-201ENST00000265379 EFCAB12Q6NXP0 572 aa8.52□□□□□ -1.04
COL6A5-201ENST00000265379 RIN3Q8TB24 985 aa8.52□□□□□ -1.04
COL6A5-201ENST00000265379 CMTM5Q96DZ9 223 aa8.52□□□□□ -1.04
COL6A5-201ENST00000265379 APBA2Q99767 749 aa8.52□□□□□ -1.04
COL6A5-201ENST00000265379 GRK2P25098 689 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 SUZ12Q15022 739 aaKnown RBP8.52□□□□□ -1.05
COL6A5-201ENST00000265379 MMS22LQ6ZRQ5 1243 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 ANO5Q75V66 913 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 ZBTB33Q86T24 672 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 EXT2Q93063 718 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 C18orf25Q96B23 403 aaPredicted RBP8.52□□□□□ -1.05
COL6A5-201ENST00000265379 GLT1D1Q96MS3 346 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 GGCXP38435 758 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 GPS1Q13098 491 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 ZCWPW2Q504Y3 356 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 ICA1LQ8NDH6 482 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 ZFYVE19Q96K21 471 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 SSU72Q9NP77 194 aaKnown RBP8.52□□□□□ -1.05
COL6A5-201ENST00000265379 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.52□□□□□ -1.05
COL6A5-201ENST00000265379 ZNF711Q9Y462 761 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 H7C0S8 307 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 APOC4-APOC2K7ER74 178 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 ZBTB7AO95365 584 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 APOC2P02655 101 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 MDH1P40925 334 aaKnown RBP8.52□□□□□ -1.05
COL6A5-201ENST00000265379 LAMTOR4Q0VGL1 99 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 ITGA9Q13797 1035 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 BEND6Q5SZJ8 279 aaPredicted RBP8.52□□□□□ -1.05
COL6A5-201ENST00000265379 TTC30BQ8N4P2 665 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 SYBUQ9NX95 663 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 DPP3Q9NY33 737 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 PCDHGB4Q9UN71 923 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 WDR91A4D1P6 747 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 E5RI56 91 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 UBXN8O00124 270 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 KLHL2O95198 593 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 ERVK-24P63145 666 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 TMPRSS15P98073 1019 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 RWDD4Q6NW29 188 aaKnown RBP8.52□□□□□ -1.05
COL6A5-201ENST00000265379 ATPAF2Q8N5M1 289 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 STK32AQ8WU08 396 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 PITPNM3Q9BZ71 974 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 AGPAT5Q9NUQ2 364 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 ABT1Q9ULW3 272 aaKnown RBP8.52□□□□□ -1.05
COL6A5-201ENST00000265379 CACNA1SQ13698 1873 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 RNF103-CHMP3A0A140T963 221 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 M0R2N6 131 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 NEMP1O14524 444 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 FGF19O95750 216 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 CD44P16070 742 aaKnown RBP8.52□□□□□ -1.05
COL6A5-201ENST00000265379 PDGFRAP16234 1089 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 VCPP55072 806 aaKnown RBP8.52□□□□□ -1.05
COL6A5-201ENST00000265379 SLC44A4Q53GD3 710 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 CELF3Q5SZQ8 465 aaKnown RBP8.52□□□□□ -1.05
COL6A5-201ENST00000265379 CERS5Q8N5B7 392 aa8.52□□□□□ -1.05
COL6A5-201ENST00000265379 TBC1D19Q8N5T2 526 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms