RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ZNF70Q9UC06 446 aaPredicted RBP13.64□□□□□ -0.23
NUP54-201ENST00000264883 ZNHIT2Q9UHR6 403 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 PCDHGB4Q9UN71 923 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 PCDHGB5Q9Y5G0 923 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 HEY1Q9Y5J3 304 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 MAD1L1Q9Y6D9 718 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 MATN2O00339 956 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 GRIN3BO60391 1043 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 CCNT2O60583 730 aaKnown RBP13.64□□□□□ -0.23
NUP54-201ENST00000264883 PIAS1O75925 651 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 PROSCO94903 275 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 COL6A2P12110 1019 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 UNGP13051 313 aaPredicted RBP13.64□□□□□ -0.23
NUP54-201ENST00000264883 PHBP35232 272 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 ETV4P43268 484 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 CLCN2P51788 898 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 EPHB1P54762 984 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 MYBPC1Q00872 1141 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 TFDP1Q14186 410 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 OGFRL1Q5TC84 451 aaPredicted RBP13.64□□□□□ -0.23
NUP54-201ENST00000264883 LIN9Q5TKA1 542 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 MIER3Q7Z3K6 550 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 GLIS1Q8NBF1 620 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 EXD1Q8NHP7 514 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 KCNN1Q92952 543 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 RSL24D1Q9UHA3 163 aaKnown RBP13.64□□□□□ -0.23
NUP54-201ENST00000264883 CNTNAP1P78357 1384 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 I3L4J1 428 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 MT-ND3P03897 115 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 ZSCAN5DPP0CG00 497 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 FDX1P10109 184 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 ALDH1A3P47895 512 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 ARSEP51690 589 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 GPS1Q13098 491 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 APOFQ13790 326 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 MORF4L2Q15014 288 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 SNRNP35Q16560 246 aaKnown RBP13.63□□□□□ -0.23
NUP54-201ENST00000264883 IYDQ6PHW0 289 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 PAOXQ6QHF9 649 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 TRIM72Q6ZMU5 477 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 CNBD2Q96M20 576 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 MXRA8Q9BRK3 442 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 SYT17Q9BSW7 474 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 DEFB129Q9H1M3 183 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 MRPL47Q9HD33 250 aaKnown RBP13.63□□□□□ -0.23
NUP54-201ENST00000264883 RAB20Q9NX57 234 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 HEMK1Q9Y5R4 338 aaPredicted RBP13.63□□□□□ -0.23
NUP54-201ENST00000264883 NFASCO94856 1347 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 FBP2O00757 339 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 PLA2G6O60733 806 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 BANF1O75531 89 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 CSDE1O75534 798 aaKnown RBP13.63□□□□□ -0.23
NUP54-201ENST00000264883 C6orf222P0C671 652 aaPredicted RBP13.63□□□□□ -0.23
NUP54-201ENST00000264883 SRGAP2CP0DJJ0 459 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 SRGAP2BP0DMP2 458 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 STT3AP46977 705 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 ZNF280AP59817 542 aaPredicted RBP13.63□□□□□ -0.23
NUP54-201ENST00000264883 UBAP2LQ14157 1087 aaKnown RBP13.63□□□□□ -0.23
NUP54-201ENST00000264883 C16orf72Q14CZ0 275 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 ACAP1Q15027 740 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 KLHL38Q2WGJ6 581 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 ARID3BQ8IVW6 561 aaPredicted RBP13.63□□□□□ -0.23
NUP54-201ENST00000264883 CHURC1Q8WUH1 139 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 APOPT1Q96IL0 206 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 VCPIP1Q96JH7 1222 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 RILPQ96NA2 401 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 TSPAN18Q96SJ8 248 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 DHRS4Q9BTZ2 278 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 RRN3Q9NYV6 651 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 RAB26Q9ULW5 256 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 FADS3Q9Y5Q0 445 aa13.63□□□□□ -0.23
NUP54-201ENST00000264883 MYOCOSA0A1B0GUC4 107 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 CLRN2A0PK11 232 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 FZD9O00144 591 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 KLF11O14901 512 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 CRTAMO95727 393 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 PDGFRBP09619 1106 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 SSTR1P30872 391 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 NSFP46459 744 aaKnown RBP13.62□□□□□ -0.23
NUP54-201ENST00000264883 RARRES1P49788 294 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 HDAC4P56524 1084 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 CNGA3Q16281 694 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 RALGPS1Q5JS13 557 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 DHRS4L2Q6PKH6 230 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 POTEHQ6S545 545 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 TRIM50Q86XT4 487 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 ALLCQ8N6M5 410 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 POU5F2Q8N7G0 328 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 FAM151AQ8WW52 585 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 USP6NLQ92738 828 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 SEMA4DQ92854 862 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 CCDC124Q96CT7 223 aaKnown RBP13.62□□□□□ -0.23
NUP54-201ENST00000264883 COX4I2Q96KJ9 171 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 BIRC8Q96P09 236 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 PCDHB2Q9Y5E7 798 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 SCINQ9Y6U3 715 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 CLUHO75153 1309 aa13.62□□□□□ -0.23
NUP54-201ENST00000264883 SORBS2O94875 1100 aaKnown RBP13.61□□□□□ -0.23
NUP54-201ENST00000264883 ADRB2P07550 413 aa13.61□□□□□ -0.23
NUP54-201ENST00000264883 SERPINA6P08185 405 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms