RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 CD274Q9NZQ7 290 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 LRRC10BA6NIK2 292 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 PIK3CDO00329 1044 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 XKR3Q5GH77 459 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 VPS33BQ9H267 617 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 IL17RBQ9NRM6 502 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 GALNT8Q9NY28 637 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 DCDC2Q9UHG0 476 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 ATP8B3O60423 1300 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 GPR75-ASB3A0A0A6YYF3 556 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 DPPA5A6NC42 116 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 EXTL3O43909 919 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 SUPT7LO94864 414 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 VEGFAP15692 232 aaPredicted RBP10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 FGFR2P21802 821 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 SLC1A6P48664 564 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 CHRNB3Q05901 458 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 XRCC4Q13426 336 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 NFYCQ13952 458 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 UGP2Q16851 508 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 AARS2Q5JTZ9 985 aaKnown RBP10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 ZNF677Q86XU0 584 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 KAT2BQ92831 832 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 CDRT15Q96T59 188 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 KCTD10Q9H3F6 313 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 GSSP48637 474 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 CASP7P55210 303 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 SLC25A3Q00325 362 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 CUL2Q13617 745 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 KBTBD12Q3ZCT8 623 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 AGKQ53H12 422 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 IPMKQ8NFU5 416 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 BTN2A2Q8WVV5 523 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 PLEKHA5Q9HAU0 1116 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 COPG2Q9UBF2 871 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 CD163L1Q9NR16 1453 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 NRXN1Q9ULB1 1477 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 RNF225M0QZC1 329 aaPredicted RBP10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 PRPF4O43172 522 aaKnown RBP eCLIP10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 RARAP10276 462 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 SSTR1P30872 391 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 SFSWAPQ12872 951 aaKnown RBP10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 BFSP2Q13515 415 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 POLD3Q15054 466 aaPredicted RBP10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 GALNTL6Q49A17 601 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 TTLL6Q8N841 843 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 LINC00116Q8NCU8 138 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 SEMA4DQ92854 862 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 PGM2Q96G03 612 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 SPON2Q9BUD6 331 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 MRPS26Q9BYN8 205 aaKnown RBP10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 RAD21L1Q9H4I0 556 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 PTPRHQ9HD43 1115 aa10.06□□□□□ -0.8
CTDSPL2-201ENST00000260327 ANPEPP15144 967 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 NELFEP18615 380 aaKnown RBP10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 ALDH1A3P47895 512 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 EFNA5P52803 228 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 HMGCS2P54868 508 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 DGKDQ16760 1214 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 SLC5A9Q2M3M2 681 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 DCAF4L1Q3SXM0 396 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 TFDP3Q5H9I0 405 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 RIPOR1Q6ZS17 1223 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 TAS1R2Q8TE23 839 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 NMRK1Q9NWW6 199 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 VWDEQ8N2E2 1590 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 ARP10275 920 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 DENND1BQ6P3S1 775 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 LRRC8DQ7L1W4 858 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 TXNRD3Q86VQ6 643 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 TSPAN17Q96FV3 270 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 SLC24A2Q9UI40 661 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 SIK3Q9Y2K2 1263 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 RPS6KL1Q9Y6S9 549 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 HEATR9A2RTY3 570 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 DCXO43602 365 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 ZMPSTE24O75844 475 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 GPD1P21695 349 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 NCALDP61601 193 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 TRIP4Q15650 581 aaPredicted RBP10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 SLC10A5Q5PT55 438 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 ATG14Q6ZNE5 492 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 OTOAQ7RTW8 1153 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 ZNF720Q7Z2F6 126 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 KCNK18Q7Z418 384 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 SLC26A11Q86WA9 606 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 TRIM69Q86WT6 500 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 SEPT12Q8IYM1 358 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 ERLEC1Q96DZ1 483 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 SAR1AQ9NR31 198 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 TAF2Q6P1X5 1199 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 LRRC71Q8N4P6 559 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 CKAP2Q8WWK9 683 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 TSPAN9O75954 239 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 BHLHE22Q8NFJ8 381 aaPredicted RBP10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 FBXO28Q9NVF7 368 aa10.05□□□□□ -0.8
CTDSPL2-201ENST00000260327 PCP4L1A6NKN8 68 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 C5orf58C9J3I9 102 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 TNFRSF21O75509 655 aa10.04□□□□□ -0.8
CTDSPL2-201ENST00000260327 NR3C2P08235 984 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms