RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 NAGAP17050 411 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 ANXA13P27216 316 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 PRDX6P30041 224 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 RCAN1P53805 252 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 EHHADHQ08426 723 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 SF3A3Q12874 501 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCNA1-201ENST00000255465 TRIM32Q13049 653 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 ZNF792Q3KQV3 632 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 CCNJQ5T5M9 372 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 PPP4R4Q6NUP7 873 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 RFPL4BQ6ZWI9 263 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 FBXO11Q86XK2 927 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 HACE1Q8IYU2 909 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 CMTR1Q8N1G2 835 aaKnown RBP12.29□□□□□ -0.44
CCNA1-201ENST00000255465 TTC30BQ8N4P2 665 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 METTL25Q8N6Q8 603 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCNA1-201ENST00000255465 SPATA17Q96L03 361 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 TTC25Q96NG3 672 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 PIGSQ96S52 555 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 NCKIPSDQ9NZQ3 722 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 EXOC7Q9UPT5 735 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 PCDHB4Q9Y5E5 795 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 PCDHGA11Q9Y5H2 935 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 RPTORQ8N122 1335 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 NFIBO00712 420 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 SH3BP5O60239 455 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 PPP1R11O60927 126 aaPredicted RBP12.29□□□□□ -0.44
CCNA1-201ENST00000255465 SIN3BO75182 1162 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 MYCP01106 439 aaPredicted RBP12.29□□□□□ -0.44
CCNA1-201ENST00000255465 SERPING1P05155 500 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 ATP5BP06576 529 aaKnown RBP12.29□□□□□ -0.44
CCNA1-201ENST00000255465 RARBP10826 455 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 ZNF23P17027 643 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 PGM1P36871 562 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 UBXN2AP68543 259 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 C19orf57Q0VDD7 668 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 COX10Q12887 443 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 RTN1Q16799 776 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 CYP4A22Q5TCH4 519 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 TMPRSS6Q8IU80 811 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 SYCE1Q8N0S2 351 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 ICA1LQ8NDH6 482 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 CATSPER1Q8NEC5 780 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 CLEC4DQ8WXI8 215 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 PCMTD1Q96MG8 357 aaPredicted RBP12.29□□□□□ -0.44
CCNA1-201ENST00000255465 FERMT1Q9BQL6 677 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 AMNQ9BXJ7 453 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 CCDC113Q9H0I3 377 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 CSRNP2Q9H175 543 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 LRRC4CQ9HCJ2 640 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 TMA7Q9Y2S6 64 aaKnown RBP12.29□□□□□ -0.44
CCNA1-201ENST00000255465 MAD1L1Q9Y6D9 718 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 COMMD10Q9Y6G5 202 aa12.29□□□□□ -0.44
CCNA1-201ENST00000255465 PNMA6FA0A0J9YX94 578 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 B8ZZF3 427 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 H0YC42 278 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 K7EPI3 171 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 PGM3O95394 542 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 IGHA2P01877 340 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 BRAFP15056 766 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 IFNA8P32881 189 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 AFMP43652 599 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 ALDH3B2P48448 385 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 TPD52P55327 224 aaPredicted RBP12.28□□□□□ -0.44
CCNA1-201ENST00000255465 NPEPPSP55786 919 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 GJA9P57773 515 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 PDE4DQ08499 809 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 LRRC14Q15048 493 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 TMEM266Q2M3C6 531 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 ZNF568Q3ZCX4 644 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 KCTD21Q4G0X4 260 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 NSMFQ6X4W1 530 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 PRR23CQ6ZRP0 262 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 FAM47EQ6ZV65 393 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 LINC00469Q8N7U9 141 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 CCDC89Q8N998 374 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 AFG1LQ8WV93 481 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 OSCP1Q8WVF1 389 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 TRUB1Q8WWH5 349 aaKnown RBP12.28□□□□□ -0.44
CCNA1-201ENST00000255465 OSBPL8Q9BZF1 889 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 MAN1C1Q9NR34 630 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 FAM217BQ9NTX9 383 aaPredicted RBP12.28□□□□□ -0.44
CCNA1-201ENST00000255465 AMACRQ9UHK6 382 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 DOLKQ9UPQ8 538 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 FRMPD3Q5JV73 1810 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 PFASO15067 1338 aa12.28□□□□□ -0.44
CCNA1-201ENST00000255465 XPO1O14980 1071 aaKnown RBP12.27□□□□□ -0.44
CCNA1-201ENST00000255465 BUB1O43683 1085 aa12.27□□□□□ -0.44
CCNA1-201ENST00000255465 TSPAN9O75954 239 aa12.27□□□□□ -0.44
CCNA1-201ENST00000255465 FTCDO95954 541 aa12.27□□□□□ -0.44
CCNA1-201ENST00000255465 RPN1P04843 607 aaKnown RBP12.27□□□□□ -0.44
CCNA1-201ENST00000255465 POLR2CP19387 275 aaPredicted RBP12.27□□□□□ -0.44
CCNA1-201ENST00000255465 METAP2P50579 478 aaKnown RBP eCLIP12.27□□□□□ -0.44
CCNA1-201ENST00000255465 TOB1P50616 345 aaPredicted RBP12.27□□□□□ -0.44
CCNA1-201ENST00000255465 CNTN2Q02246 1040 aa12.27□□□□□ -0.44
CCNA1-201ENST00000255465 PPARDQ03181 441 aa12.27□□□□□ -0.44
CCNA1-201ENST00000255465 FOLH1Q04609 750 aa12.27□□□□□ -0.44
CCNA1-201ENST00000255465 MOGQ16653 247 aa12.27□□□□□ -0.44
CCNA1-201ENST00000255465 PDK4Q16654 411 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms