RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 GOLGA8NF8WBI6 632 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 SNRPAP09012 282 aaKnown RBP17.53■□□□□ 0.4
SGPP1-201ENST00000247225 CXCL8P10145 99 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 PGGT1BP53609 377 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 MCL1Q07820 350 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 IRGCQ6NXR0 463 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 PIP4K2CQ8TBX8 421 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 NKD2Q969F2 451 aaPredicted RBP17.53■□□□□ 0.4
SGPP1-201ENST00000247225 TWNKQ96RR1 684 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 IRAK4Q9NWZ3 460 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 SLC4A7Q9Y6M7 1214 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 LYPLA2O95372 231 aa17.52■□□□□ 0.4
SGPP1-201ENST00000247225 SNRPFP62306 86 aaKnown RBP17.52■□□□□ 0.4
SGPP1-201ENST00000247225 AMHR2Q16671 573 aa17.52■□□□□ 0.4
SGPP1-201ENST00000247225 C15orf39Q6ZRI6 1047 aa17.52■□□□□ 0.4
SGPP1-201ENST00000247225 RAPH1Q70E73 1250 aa17.52■□□□□ 0.4
SGPP1-201ENST00000247225 ENDOVQ8N8Q3 282 aaKnown RBP17.52■□□□□ 0.4
SGPP1-201ENST00000247225 PHACTR1Q9C0D0 580 aa17.52■□□□□ 0.4
SGPP1-201ENST00000247225 EBF3Q9H4W6 596 aa17.52■□□□□ 0.4
SGPP1-201ENST00000247225 ANGPTL2Q9UKU9 493 aa17.52■□□□□ 0.4
SGPP1-201ENST00000247225 MYH9P35579 1960 aaKnown RBP17.52■□□□□ 0.4
SGPP1-201ENST00000247225 WNT10BO00744 389 aa17.52■□□□□ 0.4
SGPP1-201ENST00000247225 TRPA1O75762 1119 aa17.52■□□□□ 0.4
SGPP1-201ENST00000247225 TNNC2P02585 160 aa17.52■□□□□ 0.4
SGPP1-201ENST00000247225 ATP6V1B1P15313 513 aa17.52■□□□□ 0.4
SGPP1-201ENST00000247225 TCN1P20061 433 aaPredicted RBP17.52■□□□□ 0.4
SGPP1-201ENST00000247225 ATXN1P54253 815 aaKnown RBP17.52■□□□□ 0.4
SGPP1-201ENST00000247225 PRKD1Q15139 912 aaPredicted RBP17.52■□□□□ 0.4
SGPP1-201ENST00000247225 FOXB2Q5VYV0 432 aa17.52■□□□□ 0.4
SGPP1-201ENST00000247225 SLFN12LQ6IEE8 588 aa17.52■□□□□ 0.4
SGPP1-201ENST00000247225 RXFP2Q8WXD0 754 aa17.52■□□□□ 0.4
SGPP1-201ENST00000247225 NTPCRQ9BSD7 190 aaKnown RBP17.52■□□□□ 0.4
SGPP1-201ENST00000247225 CYLDQ9NQC7 956 aa17.52■□□□□ 0.4
SGPP1-201ENST00000247225 FARP1Q9Y4F1 1045 aaPredicted RBP17.52■□□□□ 0.4
SGPP1-201ENST00000247225 VWA5AO00534 786 aa17.52■□□□□ 0.39
SGPP1-201ENST00000247225 ITM2AO43736 263 aa17.52■□□□□ 0.39
SGPP1-201ENST00000247225 CSH1P0DML2 217 aa17.52■□□□□ 0.39
SGPP1-201ENST00000247225 CSH2P0DML3 217 aa17.52■□□□□ 0.39
SGPP1-201ENST00000247225 RARBP10826 455 aa17.52■□□□□ 0.39
SGPP1-201ENST00000247225 OSBPP22059 807 aa17.52■□□□□ 0.39
SGPP1-201ENST00000247225 GSTT1P30711 240 aa17.52■□□□□ 0.39
SGPP1-201ENST00000247225 AP2B1P63010 937 aa17.52■□□□□ 0.39
SGPP1-201ENST00000247225 CUL3Q13618 768 aa17.52■□□□□ 0.39
SGPP1-201ENST00000247225 KRT27Q7Z3Y8 459 aa17.52■□□□□ 0.39
SGPP1-201ENST00000247225 SLC26A11Q86WA9 606 aa17.52■□□□□ 0.39
SGPP1-201ENST00000247225 VCPIP1Q96JH7 1222 aa17.52■□□□□ 0.39
SGPP1-201ENST00000247225 AGAP3Q96P47 875 aa17.52■□□□□ 0.39
SGPP1-201ENST00000247225 ZNF358Q9NW07 568 aa17.52■□□□□ 0.39
SGPP1-201ENST00000247225 KCNA2P16389 499 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 CAPSQ13938 189 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 ZNF667Q5HYK9 610 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 PPM1JQ5JR12 505 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 CES4AQ5XG92 561 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 IL31Q6EBC2 164 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 LPIN3Q9BQK8 851 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 PNPOQ9NVS9 261 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 FIS1Q9Y3D6 152 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 MAGEA13PA6NCF6 341 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 WDR46O15213 610 aaKnown RBP17.51■□□□□ 0.39
SGPP1-201ENST00000247225 ITGB3P05106 788 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 TGFB2P61812 414 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 Q3C1V9 767 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 TTC39BQ5VTQ0 682 aaPredicted RBP17.51■□□□□ 0.39
SGPP1-201ENST00000247225 CLMNQ96JQ2 1002 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 TIPINQ9BVW5 301 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 DHX35Q9H5Z1 703 aaKnown RBP17.51■□□□□ 0.39
SGPP1-201ENST00000247225 SMYD2Q9NRG4 433 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 CLIC5Q9NZA1 410 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 CENPFP49454 3210 aa17.51■□□□□ 0.39
SGPP1-201ENST00000247225 E9PBE3 544 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 KLHL41O60662 606 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 ASS1P00966 412 aaKnown RBP17.5■□□□□ 0.39
SGPP1-201ENST00000247225 LYNP07948 512 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.5■□□□□ 0.39
SGPP1-201ENST00000247225 NBPF12Q5TAG4 269 aaPredicted RBP17.5■□□□□ 0.39
SGPP1-201ENST00000247225 LGSNQ5TDP6 509 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 ATG16L1Q676U5 607 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 TMPRSS6Q8IU80 811 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 SCUBE3Q8IX30 993 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 ZNF276Q8N554 614 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 SLC44A1Q8WWI5 657 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 SKA1Q96BD8 255 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 ALKBH8Q96BT7 664 aaKnown RBP17.5■□□□□ 0.39
SGPP1-201ENST00000247225 STX18Q9P2W9 335 aaKnown RBP17.5■□□□□ 0.39
SGPP1-201ENST00000247225 MYOCOSA0A1B0GUC4 107 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 PMM2O15305 246 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 DSG1Q02413 1049 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 AP1B1Q10567 949 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 HIC1Q14526 733 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 EEF1DP3Q658K8 133 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 BBS12Q6ZW61 710 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 TNS4Q8IZW8 715 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 TTC13Q8NBP0 860 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 PEBP4Q96S96 227 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 WWP1Q9H0M0 922 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 RNPEPQ9H4A4 650 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 A6NJR5 290 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 LDHAP00338 332 aaKnown RBP17.5■□□□□ 0.39
SGPP1-201ENST00000247225 OATP04181 439 aa17.5■□□□□ 0.39
SGPP1-201ENST00000247225 OLIG2Q13516 323 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms