RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 ATG2BQ96BY7 2078 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 MYO16Q9Y6X6 1858 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 CCDC163A0A0D9SF12 145 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 LEFTY2O00292 366 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 RNF40O75150 1001 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 OAS1P00973 400 aaKnown RBP19.06■□□□□ 0.64
PFN1-201ENST00000225655 RETP07949 1114 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 YWHAQP27348 245 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 LMNB2Q03252 620 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 NR1H3Q13133 447 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 C1orf220Q5T0J3 134 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 NAIF1Q69YI7 327 aaPredicted RBP19.06■□□□□ 0.64
PFN1-201ENST00000225655 IRF2BP1Q8IU81 584 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 DHX40Q8IX18 779 aaKnown RBP19.06■□□□□ 0.64
PFN1-201ENST00000225655 NUP93Q8N1F7 819 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 CD101Q93033 1021 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 SDCBP2Q9H190 292 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 LINC00597Q9H2U6 94 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 CBX8Q9HC52 389 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 KIAA1549LQ6ZVL6 1849 aa19.06■□□□□ 0.64
PFN1-201ENST00000225655 PMM2O15305 246 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 LRP3O75074 770 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 RTN3O95197 1032 aaPredicted RBP19.05■□□□□ 0.64
PFN1-201ENST00000225655 NFATC1O95644 943 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 ASS1P00966 412 aaKnown RBP19.05■□□□□ 0.64
PFN1-201ENST00000225655 HLA-DRAP01903 254 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 SDHBP21912 280 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 HOXC13P31276 330 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 SRSF5Q13243 272 aaKnown RBP19.05■□□□□ 0.64
PFN1-201ENST00000225655 RSPO4Q2I0M5 234 aaPredicted RBP19.05■□□□□ 0.64
PFN1-201ENST00000225655 FKBP15Q5T1M5 1219 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 SCARA5Q6ZMJ2 495 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 PAQR9Q6ZVX9 377 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 DGLUCYQ7Z3D6 616 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 FAM35AQ86V20 835 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 PDZD8Q8NEN9 1154 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 OVCA2Q8WZ82 227 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 ELMO3Q96BJ8 720 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 SMARCD1Q96GM5 515 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 KCNK16Q96T55 309 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 DNAI2Q9GZS0 605 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 PARD6AQ9NPB6 346 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 DMAP1Q9NPF5 467 aaPredicted RBP19.05■□□□□ 0.64
PFN1-201ENST00000225655 RAB20Q9NX57 234 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 USP18Q9UMW8 372 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 SLC8A2Q9UPR5 921 aa19.05■□□□□ 0.64
PFN1-201ENST00000225655 PRR5-ARHGAP8B1AHC4 643 aa19.04■□□□□ 0.64
PFN1-201ENST00000225655 ABL1P00519 1130 aa19.04■□□□□ 0.64
PFN1-201ENST00000225655 ARHGAP8P85298 464 aa19.04■□□□□ 0.64
PFN1-201ENST00000225655 SPEM2Q0P670 501 aa19.04■□□□□ 0.64
PFN1-201ENST00000225655 NCAPHQ15003 741 aa19.04■□□□□ 0.64
PFN1-201ENST00000225655 VWA3BQ502W6 1294 aa19.04■□□□□ 0.64
PFN1-201ENST00000225655 ACOT1Q86TX2 421 aa19.04■□□□□ 0.64
PFN1-201ENST00000225655 LUZP1Q86V48 1076 aa19.04■□□□□ 0.64
PFN1-201ENST00000225655 FUKQ8N0W3 1084 aa19.04■□□□□ 0.64
PFN1-201ENST00000225655 CAMKK1Q8N5S9 505 aa19.04■□□□□ 0.64
PFN1-201ENST00000225655 TAS1R2Q8TE23 839 aa19.04■□□□□ 0.64
PFN1-201ENST00000225655 EZH1Q92800 747 aaPredicted RBP19.04■□□□□ 0.64
PFN1-201ENST00000225655 MED10Q9BTT4 135 aa19.04■□□□□ 0.64
PFN1-201ENST00000225655 NDST4Q9H3R1 872 aa19.04■□□□□ 0.64
PFN1-201ENST00000225655 CPQQ9Y646 472 aa19.04■□□□□ 0.64
PFN1-201ENST00000225655 SLC9A3R1O14745 358 aaPredicted RBP19.03■□□□□ 0.64
PFN1-201ENST00000225655 TNFRSF10BO14763 440 aa19.03■□□□□ 0.64
PFN1-201ENST00000225655 TRIM21P19474 475 aaKnown RBP19.03■□□□□ 0.64
PFN1-201ENST00000225655 IFRD2Q12894 506 aaPredicted RBP19.03■□□□□ 0.64
PFN1-201ENST00000225655 IQCB1Q15051 598 aa19.03■□□□□ 0.64
PFN1-201ENST00000225655 FILIP1LQ4L180 1135 aa19.03■□□□□ 0.64
PFN1-201ENST00000225655 CBWD6Q4V339 395 aa19.03■□□□□ 0.64
PFN1-201ENST00000225655 CBWD3Q5JTY5 395 aa19.03■□□□□ 0.64
PFN1-201ENST00000225655 CBWD5Q5RIA9 395 aa19.03■□□□□ 0.64
PFN1-201ENST00000225655 SNX30Q5VWJ9 437 aa19.03■□□□□ 0.64
PFN1-201ENST00000225655 CEP68Q76N32 757 aa19.03■□□□□ 0.64
PFN1-201ENST00000225655 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.03■□□□□ 0.64
PFN1-201ENST00000225655 UNC93AQ86WB7 457 aa19.03■□□□□ 0.64
PFN1-201ENST00000225655 DDX42Q86XP3 938 aaKnown RBP eCLIP19.03■□□□□ 0.64
PFN1-201ENST00000225655 CRYBG2Q8N1P7 616 aa19.03■□□□□ 0.64
PFN1-201ENST00000225655 FBXO32Q969P5 355 aa19.03■□□□□ 0.64
PFN1-201ENST00000225655 COMMD8Q9NX08 183 aa19.03■□□□□ 0.64
PFN1-201ENST00000225655 SMPD4Q9NXE4 827 aa19.03■□□□□ 0.64
PFN1-201ENST00000225655 IL37Q9NZH6 218 aa19.03■□□□□ 0.64
PFN1-201ENST00000225655 RALGAPA1Q6GYQ0 2036 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 GTPBP10A4D1E9 387 aaKnown RBP19.02■□□□□ 0.64
PFN1-201ENST00000225655 ZNF18P17022 549 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 ASPAP45381 313 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 NDST1P52848 882 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 SLC5A3P53794 718 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 KRT31Q15323 416 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 GBP6Q6ZN66 633 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 SYT13Q7L8C5 426 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 ADGRG2Q8IZP9 1017 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 FAM160A2Q8N612 972 aaPredicted RBP19.02■□□□□ 0.64
PFN1-201ENST00000225655 RPLP0P6Q8NHW5 317 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 CCDC26Q8TAB7 109 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 SCAMP5Q8TAC9 235 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 GAB3Q8WWW8 586 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 FAXDC2Q96IV6 333 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 KRT82Q9NSB4 513 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 TAB2Q9NYJ8 693 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 CFAP97Q9P2B7 532 aa19.02■□□□□ 0.64
PFN1-201ENST00000225655 LIMA1Q9UHB6 759 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms