RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 AQP5P55064 265 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 OSTNP61366 133 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 TGFB2P61812 414 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 ROR1Q01973 937 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 MTMR2Q13614 643 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 C1orf146Q5VVC0 180 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 FOXB2Q5VYV0 432 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 MTHFD1LQ6UB35 978 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 POLNQ7Z5Q5 900 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 E2F7Q96AV8 911 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 MEI4A8MW99 385 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 CXorf49A8MYA2 514 aaPredicted RBP10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 PIK3R2O00459 728 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 ZNF189O75820 626 aaPredicted RBP10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 MIPP30301 263 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 TTC39BQ5VTQ0 682 aaPredicted RBP10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 ZCCHC23Q6ZST2 131 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 SLC26A11Q86WA9 606 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 NUDCD3Q8IVD9 361 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 APLFQ8IW19 511 aaPredicted RBP10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 THNSL1Q8IYQ7 743 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 NIPA2Q8N8Q9 360 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 SLC7A3Q8WY07 619 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 WDR35Q9P2L0 1181 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 GJA3Q9Y6H8 435 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 A8MXQ7 604 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 APOC4-APOC2K7ER74 178 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 UGT1A9O60656 530 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 KRT37O76014 449 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 APOC2P02655 101 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 KRT19P08727 400 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 ANPEPP15144 967 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 EIF4BP23588 611 aaKnown RBP10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 GHRHRQ02643 423 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 LRRC36Q1X8D7 754 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 ZNF699Q32M78 642 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 ABHD15Q6UXT9 468 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 LPAR1Q92633 364 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 PANX3Q96QZ0 392 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 UGT1A7Q9HAW7 530 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 UGT1A10Q9HAW8 530 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 UGT1A8Q9HAW9 530 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 PCMTD2Q9NV79 361 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 MAP3K20Q9NYL2 800 aaKnown RBP10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 CNTN3Q9P232 1028 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 CYTH4Q9UIA0 394 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 POLIQ9UNA4 740 aa10.94□□□□□ -0.66
CX3CL1-201ENST00000006053 DCAF8L1A6NGE4 600 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 ARHGAP42A6NI28 874 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 PLSCR1O15162 318 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 TBC1D12O60347 775 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 ITGBL1O95965 494 aaPredicted RBP10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 SNRPAP09012 282 aaKnown RBP10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 NAMPTP43490 491 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 CDH6P55285 790 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 CDO1Q16878 200 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 HSF5Q4G112 596 aaPredicted RBP10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 SH2D5Q6ZV89 423 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 UBR7Q8N806 425 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 ZNF668Q96K58 619 aaPredicted RBP10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 UBE2OQ9C0C9 1292 aaKnown RBP10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 ZNF518BQ9C0D4 1074 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 PORCNQ9H237 461 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 NDE1Q9NXR1 346 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 KCNK4Q9NYG8 393 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 TEX264Q9Y6I9 313 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 THSD7AQ9UPZ6 1657 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 COL11A2P13942 1736 aaPredicted RBP10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 PRR5-ARHGAP8B1AHC4 643 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 SMAPO00193 183 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 GSTA2P09210 222 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 CDH8P55286 799 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 ARHGAP8P85298 464 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 UBAP2LQ14157 1087 aaKnown RBP10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 RASIP1Q5U651 963 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 ATG16L1Q676U5 607 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 SNRNP48Q6IEG0 339 aaKnown RBP10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 CRLF3Q8IUI8 442 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 ULK2Q8IYT8 1036 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 PPP1R14CQ8TAE6 165 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 GATA6Q92908 595 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 MTBPQ96DY7 904 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 CPXM1Q96SM3 734 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 TRIM56Q9BRZ2 755 aaKnown RBP10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 WWP1Q9H0M0 922 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 SMYD3Q9H7B4 428 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 ZNF302Q9NR11 478 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 ZC3H7BQ9UGR2 993 aaKnown RBP10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 TAGLN3Q9UI15 199 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 EFR3BQ9Y2G0 817 aa10.93□□□□□ -0.66
CX3CL1-201ENST00000006053 KCNN4O15554 427 aa10.92□□□□□ -0.66
CX3CL1-201ENST00000006053 TOP3BO95985 862 aaKnown RBP10.92□□□□□ -0.66
CX3CL1-201ENST00000006053 SUPT20HL2P0C7V6 817 aa10.92□□□□□ -0.66
CX3CL1-201ENST00000006053 DPEP1P16444 411 aa10.92□□□□□ -0.66
CX3CL1-201ENST00000006053 RAP1GDS1P52306 607 aa10.92□□□□□ -0.66
CX3CL1-201ENST00000006053 AP2B1P63010 937 aa10.92□□□□□ -0.66
CX3CL1-201ENST00000006053 SUPT20HL1Q3ZLR7 823 aa10.92□□□□□ -0.66
CX3CL1-201ENST00000006053 MROH9Q5TGP6 573 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms