RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Wnk4Q80UE6 1222 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Snx2Q9CWK8 519 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Alg13Q9D8C3 1166 aaKnown RBP14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 PotegA5H0M4 473 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Tcp10cE9Q046 482 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Folh1O35409 752 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Fgf15O35622 218 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Rpl10aP53026 217 aaKnown RBP14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Fam83hQ148V8 1209 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Syce2Q505B8 171 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Znf280dQ68FE8 974 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Tdpoz3Q717B4 365 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Catsper3Q80W99 395 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Cog4Q8R1U1 785 aa14.32□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 CrymO54983 313 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 UgcgO88693 394 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Bcar1Q61140 874 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Krt72Q6IME9 520 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Tas2r115Q7M719 310 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Gpr139Q80UC8 345 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Mcoln2Q8K595 566 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Wdr98Q8VC42 657 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Capn7Q9R1S8 813 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Gm29554A0A087WNW4 188 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Arhgef37A1IGU4 676 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 GabreA2AMW3 916 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Atp8b5A3FIN4 1183 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ace3D0G895 737 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Lipo2D3YY49 398 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Rtn2O70622 471 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 ChrngP04760 519 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Q6GQU0 248 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Naif1Q6PFD7 327 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Zfp454Q80Y34 536 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Agap3Q8VHH5 910 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Slc12a9Q99MR3 914 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Asb11Q9CQ31 323 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Q9D1F3 157 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Chordc1Q9D1P4 331 aaKnown RBP14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Dlg5E9Q9R9 1921 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Kcnu1O54982 1121 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Acot1O55137 419 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Yy1Q00899 414 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ptcd3Q14C51 685 aaKnown RBP14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ogfod1Q3U0K8 545 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Sema5bQ60519 1093 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Grid1Q61627 1009 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Far2Q7TNT2 515 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Fcho1Q8K285 873 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 ArhgdiaQ99PT1 204 aaKnown RBP14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Kif12Q9D2Z8 642 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Slc26a3Q9WVC8 757 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Pdk4O70571 412 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Fgfr1P16092 822 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Pbx1P41778 430 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Axdnd1Q3UZ57 424 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Tmprss11eQ5S248 423 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Satb1Q60611 764 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Chsy1Q6ZQ11 800 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Fam118bQ8C569 351 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Tspan3Q9QY33 253 aa14.31□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 4930469K13RikA0A286YDB2 92 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 GscQ02591 256 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 RelaQ04207 549 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Bcap29Q61334 240 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Hspa1aQ61696 641 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Dlg4Q62108 724 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Aste1Q8BIR2 672 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Strip2Q8C9H6 844 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Lin7aQ8JZS0 233 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Angel1Q8VCU0 667 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Tas1r3Q925D8 858 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Anxa13Q99JG3 317 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Me2Q99KE1 589 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Zbtb18Q9WUK6 522 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Grk1Q9WVL4 564 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ttc30a2A2AKQ8 664 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 TroapB7ZNG4 668 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 KitP05532 979 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Msh3P13705 1091 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Cyp2f2P33267 491 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 PtpreP49446 699 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Nudt18Q3U2V3 323 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Krr1Q8BGA5 380 aaKnown RBP14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Palm2Q8BR92 376 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Trim14Q8BVW3 440 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Elmo3Q8BYZ7 720 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Prr33Q8C494 260 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Rfc5Q9D0F6 339 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Tm9sf1Q9DBU0 606 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Cyp4a12bA2A974 508 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 MtrA6H5Y3 1253 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Phka1P18826 1241 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Mkrn3Q60764 544 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Tpd52Q62393 224 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Xpo1Q6P5F9 1071 aaKnown RBP14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Rundc3bQ6PDC0 408 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Ttc7aQ8BGB2 858 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Lrrc8dQ8BGR2 859 aa14.3□□□□□ -0.12
Pcdha1-202ENSMUST00000193839 Cyp4a12aQ91WL5 508 aa14.3□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms