RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 AunipE9Q6Z5 340 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Zc3h12bG3X9I7 835 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Zbtb11G5E8B9 1050 aaKnown RBP11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 EpoP07321 192 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Adamts10P58459 1104 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Gabrb2P63137 512 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Dlg3P70175 849 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Q3TQQ9 903 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Lrrc24Q8BHA1 521 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Usp1Q8BJQ2 784 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Daam1Q8BPM0 1077 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Kctd12bQ8C7J6 292 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Rfx6Q8C7R7 927 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Arhgap29Q8CGF1 1266 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Stoml1Q8CI66 399 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Syne4Q8CII8 388 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Trim61Q8JZK6 461 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Acvr1cQ8K348 493 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Pcdhb1Q91Y08 818 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Decr1Q9CQ62 335 aaKnown RBP11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Psmd8Q9CX56 353 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Polr3cQ9D483 533 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Oma1Q9D8H7 521 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Ap2b1Q9DBG3 937 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Zbed6D2EAC2 980 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Apold1E9Q0X2 246 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Gm20721E9Q2U8 318 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 F6Y6L6 278 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Vmn2r39L7N2E5 861 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Per2O54943 1257 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Adam15O88839 864 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Rps6ka3P18654 740 aaKnown RBP11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Ccnd1P25322 295 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Slc1a2P43006 572 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Usp10P52479 792 aaKnown RBP11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Stmn1P54227 149 aaKnown RBP11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Sult1d1Q3UZZ6 295 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Itm2aQ61500 263 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 SnrpaQ62189 287 aaKnown RBP11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Ino80dQ66JY2 873 aaKnown RBP11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Q8BZE1 841 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Atg16l1Q8C0J2 607 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Pgm2l1Q8CAA7 621 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Taf11Q99JX1 211 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Txndc12Q9CQU0 170 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Prl2a1Q9JHK0 228 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Caln1Q9JJG7 219 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 PolhQ9JJN0 694 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Pck1Q9Z2V4 622 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Top3bQ9Z321 862 aaKnown RBP11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Gon4lQ9DB00 2260 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Rpl5P47962 297 aaKnown RBP11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Psmc1P62192 440 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Cyth2P63034 400 aaKnown RBP11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 YwhazP63101 245 aaKnown RBP11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 4930430A15RikQ05AC5 485 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Arid5aQ3U108 590 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Tfdp2Q64163 446 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Tpp2Q64514 1262 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Gpatch2lQ6PE65 482 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Tmem74Q8BQU7 305 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Q8CD60 292 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Il31raQ8K5B1 716 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Cys1Q8R4T1 145 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Trpv6Q91WD2 767 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Mov10l1Q99MV5 1187 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Klhl35Q9CZ49 574 aa11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Ppp1r12aQ9DBR7 1029 aaKnown RBP11.73□□□□□ -0.53
Lig1-211ENSMUST00000177588 Arhgef37A1IGU4 676 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Fam171a2A2A699 822 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Kif6E9PX57 802 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Kcng2F7A6P6 480 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 C130060K24RikG3UWA8 416 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Tspyl1O88852 379 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Cetn1P41209 172 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Fam172aQ3TNH5 417 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Alkbh5Q3TSG4 395 aaKnown RBP11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Zpbp2Q6X786 326 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Hdac7Q8C2B3 938 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Polr2bQ8CFI7 1174 aaKnown RBP11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 OgtQ8CGY8 1046 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Smyd2Q8R5A0 433 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Spon1Q8VCC9 807 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Pex19Q8VCI5 299 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Olfr615Q8VGY4 313 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 IrgqQ8VIM9 583 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Grk2Q99MK8 689 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Ttc33Q9D6K7 262 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Pdpk1Q9Z2A0 559 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Ccdc175E9PVB3 822 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Gm4841E9QAA8 417 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Bmpr2O35607 1038 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 SnnP61807 88 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Olfm4Q3UZZ4 505 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Ttc9Q3V038 219 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Gm10392Q3V3I3 114 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Gata6Q61169 589 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Serpinb3dQ6UKZ0 387 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Fam107aQ78TU8 144 aa11.72□□□□□ -0.53
Lig1-211ENSMUST00000177588 Ppp1r12bQ8BG95 976 aa11.72□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms