RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Trps1Q925H1 1281 aa19.78■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Taf7lQ9D3R9 471 aa19.78■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Krt7Q9DCV7 457 aa19.78■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 SisF8VQM5 1818 aa19.78■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Gm11549A0A286YD83 63 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Spin2fJ3QPU0 254 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Il3P01586 166 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 GsrP47791 500 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 S100bP50114 92 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Rab6bP61294 208 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Msx3P70354 204 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Mex3cQ05A36 652 aaKnown RBP19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Serpina6Q06770 397 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Gm3414Q3TNU4 584 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Ampd1Q3V1D3 745 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Mks1Q5SW45 561 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Siglec10Q80ZE3 688 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Pgm5Q8BZF8 567 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Washc5Q8C2E7 1159 aaKnown RBP19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Ccdc159Q8C963 411 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Fgd4Q91ZT5 766 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Slc39a3Q99K24 317 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Mcrs1Q99L90 462 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Prl2a1Q9JHK0 228 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Cpsf3Q9QXK7 684 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 PapolbQ9WVP6 641 aa19.77■□□□□ 0.76
Ccdc50-201ENSMUST00000039443 Timm44O35857 452 aa19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Dynlt1P51807 113 aa19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Dlg3P70175 849 aa19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Col9a2Q07643 688 aa19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Srrm1Q52KI8 946 aaKnown RBP19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Ppp1r13lQ5I1X5 824 aa19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Tmprss11eQ5S248 423 aa19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Psen2Q61144 448 aa19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Grid2Q61625 1007 aa19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Itih3Q61704 889 aa19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Olfr1505Q7TQQ2 316 aa19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Mettl21cQ8BLU2 248 aa19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Slc4a7Q8BTY2 1034 aa19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Trub1Q8C0D0 338 aaKnown RBP19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Myoz3Q8R4E4 245 aa19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Vwa7Q9JHA8 891 aa19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Sfmbt1Q9JMD1 863 aa19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Aldh18a1Q9Z110 795 aa19.77■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Glb1P23780 647 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Il1rapl1P59823 695 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 SnnP61807 88 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Gata5P97489 404 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Alkbh5Q3TSG4 395 aaKnown RBP19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 CttnQ60598 546 aaKnown RBP19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Cand2Q6ZQ73 1235 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Dzip3Q7TPV2 1204 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Trim14Q8BVW3 440 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Rsl1d1Q8BVY0 452 aaKnown RBP19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Olfr449Q8VGW8 311 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Rnf112Q96DY5 654 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 PolhQ9JJN0 694 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Pcsk1nQ9QXV0 258 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Dlc1Q9R0Z9 1092 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Tnfsf13bQ9WU72 309 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Arhgef37A1IGU4 676 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Ptpn3A2ALK8 913 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Slc4a9E9PUP3 929 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Gm379J3QQ19 296 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Has3O08650 554 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Gpsm3Q3U1Z5 159 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 McuQ3UMR5 350 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Scaf4Q6PFF0 1209 aaKnown RBP19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Sgsm3Q8VCZ6 750 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Homer3Q99JP6 356 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Ogfod2Q9CQ04 349 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 ParvbQ9ES46 365 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Nupr1Q9WTK0 80 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Asb1Q9WV74 336 aa19.76■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Polr2aP08775 1970 aaKnown RBP19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Scn10aQ6QIY3 1958 aa19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 0610012G03RikA0A0J9YTR2 95 aa19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Dhtkd1A2ATU0 921 aa19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Klhl41A2AUC9 606 aa19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Kif6E9PX57 802 aa19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Hoxc6P10629 235 aa19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Gsta4P24472 222 aa19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Irf3P70671 419 aa19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Hsdl2Q2TPA8 490 aaKnown RBP19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Zbtb5Q7TQG0 670 aa19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Bri3bpQ8BXV2 253 aa19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Pgm2l1Q8CAA7 621 aa19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Stau2Q8CJ67 570 aaKnown RBP19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Nde1Q9CZA6 344 aa19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 AenQ9CZI9 336 aaKnown RBP19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Gdap2Q9DBL2 498 aa19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Scyl1Q9EQC5 806 aaKnown RBP19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Ddx21Q9JIK5 851 aaKnown RBP19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Coro1cQ9WUM4 474 aa19.75■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Kbtbd2G3X9X1 623 aa19.74■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Soat2O88908 525 aa19.74■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Ccnd1P25322 295 aa19.74■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Rpl5P47962 297 aaKnown RBP19.74■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 MafP54843 370 aa19.74■□□□□ 0.75
Ccdc50-201ENSMUST00000039443 Adamts10P58459 1104 aa19.74■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms