RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Prkaa2Q8BRK8 552 aa10.27□□□□□ -0.77
Ldlr-201ENSMUST00000034713 P3h2Q8CG71 703 aa10.27□□□□□ -0.77
Ldlr-201ENSMUST00000034713 OgtQ8CGY8 1046 aa10.27□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Abcf3Q8K268 709 aa10.27□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Dnajc19Q9CQV7 116 aa10.27□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Jag1Q9QXX0 1218 aa10.27□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Fam47eD3YWC7 402 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 2610008E11RikG3X964 669 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Foxm1O08696 760 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Pde8aO88502 823 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ptprn2P80560 1001 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 DselQ0VBN2 1207 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ccdc127Q3TC33 260 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Arid5aQ3U108 590 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Arhgef9Q3UTH8 516 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Deup1Q7M6Y5 601 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Mrgprb8Q7TN51 330 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ddhd1Q80YA3 547 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Hdhd5Q91WM2 419 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Mageb3Q9D2H4 330 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Noxred1Q9D3S5 366 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Fbxo16Q9QZM9 334 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Akap17bA2A3V1 959 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 FancfE9Q5Z5 343 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Pold2O35654 469 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ccna2P51943 422 aaKnown RBP10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Cyp2j11Q3UNV2 504 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tmprss11eQ5S248 423 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Btnl9Q8BJE2 536 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Slc9b1Q8C0X2 565 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Pcdhb7Q8CDY9 829 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 BfarQ8R079 450 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ccdc137Q8R0K4 290 aaKnown RBP10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Lrrc42Q8R2U7 421 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Creld1Q91XD7 420 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Dqx1Q924H9 718 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Snx10Q9CWT3 201 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ankef1Q9D2J7 775 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Timm50Q9D880 353 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Zscan4-ps1A0A1C7CYV3 506 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Zscan4dA7KBS4 506 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 March10E9PX79 788 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Vmn2r104E9Q2J5 860 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Klhl33G3UW92 533 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Mdm4O35618 489 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Glud1P26443 558 aaKnown RBP10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Dab1P97318 588 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Mgat3Q10470 538 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Zscan4fQ3URS2 506 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Fastkd1Q6DI86 829 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ddx55Q6ZPL9 600 aaKnown RBP10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Olfr392Q7TRX6 312 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Zscan4cQ80VJ6 506 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Pcmtd2Q8BHD8 359 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 RbakQ8BQC8 711 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ano4Q8C5H1 955 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Fbxl13Q8CDU4 790 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Snrnp27Q8K194 155 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Twf1Q91YR1 350 aaKnown RBP10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Adi1Q99JT9 179 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 CoprsQ9CQ13 173 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ilf2Q9CXY6 390 aaKnown RBP10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Poc5Q9DBS8 558 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ap4b1Q9WV76 738 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 2210011C24RikA0A087WQ89 206 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Nkx1-1G3UXB3 402 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Zfp846G3X996 541 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Pex5O09012 639 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Fgf15O35622 218 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Srpk1O70551 648 aaKnown RBP10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 EporP14753 507 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Pdcd2P46718 343 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 NficP70255 439 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Trpc1Q61056 793 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Klra3Q64329 266 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Camta2Q80Y50 1208 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Pkn3Q8K045 878 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Trim31Q8R0K2 507 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 HyiQ8R1F5 277 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Olfr615Q8VGY4 313 aa10.26□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Rhox3fA2ANE1 215 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Kpna7C0LLJ0 499 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 PurbO35295 324 aaKnown RBP10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 PdgfaP20033 211 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ccnd2P30280 289 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ccnd3P30282 292 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Spc25Q3UA16 226 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Fbxw10Q5SUS0 1030 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Cyp3a13Q64464 503 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ces1fQ91WU0 561 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Fam162aQ9D6U8 155 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ace3D0G895 737 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Cxcl9P18340 126 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Rpl36P47964 105 aaKnown RBP10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Ccnt2Q7TQK0 723 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Olfr1415Q7TQS4 311 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Tmtc3Q8BRH0 920 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Afap1l1Q8BZI0 768 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Dennd2aQ8C4S8 1000 aa10.25□□□□□ -0.77
Ldlr-201ENSMUST00000034713 Stau2Q8CJ67 570 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms