RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 SerhlQ9EPB5 311 aa16.83■□□□□ 0.28
Trim28-201ENSMUST00000005705 Klf6O08584 283 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 LgmnO89017 435 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Lta4hP24527 611 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Psma2P49722 234 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ezh1P70351 747 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Slc24a2Q14BI1 711 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Trim72Q1XH17 477 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Alkbh5Q3TSG4 395 aaKnown RBP16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ckap2lQ7TS74 745 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Pgm5Q8BZF8 567 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 DnerQ8JZM4 737 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Haus3Q8QZX2 570 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Zcchc18Q8VD24 393 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Sun1Q9D666 913 aaKnown RBP16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Rnf14Q9JI90 485 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 RpgrQ9R0X5 1001 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Efcab12V9GXH0 673 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Gm5538W4VSP6 401 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Morc3F7BJB9 942 aaKnown RBP16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Gm20509G3UZF1 325 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ptpn20O55082 426 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Tnnc2P20801 160 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Fbln2P37889 1221 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Znf219Q6IQX8 726 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Serpinb3dQ6UKZ0 387 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ahcyl1Q80SW1 530 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 YarsQ91WQ3 528 aaKnown RBP16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 MceeQ9D1I5 178 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Doc2gQ9ESN1 387 aa16.82■□□□□ 0.28
Trim28-201ENSMUST00000005705 Siah3B2RWG3 268 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Atf6F6VAN0 656 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ifnar2O35664 513 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Tpp2Q64514 1262 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Wdr91Q7TMQ7 748 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Mamdc2Q8CG85 686 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Fam151aQ8QZW3 608 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 PmpcbQ9CXT8 489 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Zfp623Q9CY99 499 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Bbs5Q9CZQ9 341 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Atp8b4A2ANX3 1194 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Zbed6D2EAC2 980 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Pcdh9F8VPK8 1237 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Per1O35973 1291 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Capn11Q6J756 714 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Bnip1Q6QD59 228 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 PrcpQ7TMR0 491 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Rell1Q8K2J7 272 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Pcdhb4Q91XZ6 784 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ctu1Q99J10 420 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Dlc1Q9R0Z9 1092 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Fam71e2L7N480 754 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Dpysl4O35098 572 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Tnfrsf18O35714 228 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Shoc2O88520 582 aaKnown RBP16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 PdgfaP20033 211 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Cdo1P60334 200 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 CcnyQ8BGU5 341 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Gjd4Q8BSD4 364 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Nat14Q8BVG8 206 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Scara3Q8C850 606 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Olfr809Q8VEX8 328 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Mtif2Q91YJ5 727 aaKnown RBP16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ak5Q920P5 562 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Kdelr1Q99JH8 212 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Map3k20Q9ESL4 802 aaKnown RBP16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ptpn4Q9WU22 926 aa16.81■□□□□ 0.28
Trim28-201ENSMUST00000005705 Pgap3A2A559 320 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Cyp2c69E9PXC3 491 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Gm20721E9Q2U8 318 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 ChkaO54804 453 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Adcy1O88444 1118 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Cyp2c40P56657 491 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Gcnt3Q5JCT0 437 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Tcf12Q61286 706 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Itm2aQ61500 263 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Arhgap20Q6IFT4 1182 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 RfflQ6ZQM0 377 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Tmco5aQ9D9D5 303 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Rfx5Q9JL61 658 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Gm16430A6X8J1 155 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Zfp94E9Q6Y4 486 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Gm10250G3X9L6 160 aaKnown RBP16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 DldO08749 509 aaKnown RBP16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Per2O54943 1257 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 AlplP09242 524 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Nos2P29477 1144 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 ADGRF3Q58Y75 991 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Rpf1Q7TND5 349 aaKnown RBP16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Zfp263Q8CF60 680 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Mcoln2Q8K595 566 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Tceal1Q921P9 165 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Slxl1Q9D515 155 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Atp5hQ9DCX2 161 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Tsc1Q9EP53 1161 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Cntn6Q9JMB8 1028 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Nme3Q9WV85 169 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Mbd1Q9Z2E2 636 aa16.8■□□□□ 0.28
Trim28-201ENSMUST00000005705 Ccdc175E9PVB3 822 aa16.79■□□□□ 0.28
Trim28-201ENSMUST00000005705 Cetn1P41209 172 aa16.79■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms