RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	HAL5	P38970	855 aa	Known RBP	3.09	□□□□□ -1.91
RLM1	YPL089C	ISR1	Q06098	443 aa	Known RBP	3.09	□□□□□ -1.91
RLM1	YPL089C	ENO1	P00924	437 aa	Known RBP	3.09	□□□□□ -1.92
RLM1	YPL089C	SUM1	P46676	1062 aa		3.09	□□□□□ -1.92
RLM1	YPL089C	RSC6	P25632	483 aa		3.08	□□□□□ -1.92
RLM1	YPL089C	SOH1	P38633	127 aa		3.08	□□□□□ -1.92
RLM1	YPL089C	PEP12	P32854	288 aa		3.07	□□□□□ -1.92
RLM1	YPL089C	SHM1	P37292	490 aa	Predicted RBP	3.07	□□□□□ -1.92
RLM1	YPL089C	SAF1	P38352	637 aa		3.07	□□□□□ -1.92
RLM1	YPL089C	MSC7	P38694	644 aa		3.07	□□□□□ -1.92
RLM1	YPL089C	GIP4	P39732	760 aa		3.07	□□□□□ -1.92
RLM1	YPL089C	HDA3	Q06623	655 aa		3.07	□□□□□ -1.92
RLM1	YPL089C	CYC7	P00045	113 aa		3.06	□□□□□ -1.92
RLM1	YPL089C	TAD3	Q9URQ3	322 aa		3.06	□□□□□ -1.92
RLM1	YPL089C	YPT53	P36019	220 aa		3.05	□□□□□ -1.92
RLM1	YPL089C	GIS4	Q04233	774 aa		3.05	□□□□□ -1.92
RLM1	YPL089C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	3.05	□□□□□ -1.92	not detected
RLM1	YPL089C	NAR1	P23503	491 aa	Known RBP	3.05	□□□□□ -1.92
RLM1	YPL089C	SEG2	P34250	1132 aa		3.05	□□□□□ -1.92
RLM1	YPL089C	SLX8	P40072	274 aa		3.05	□□□□□ -1.92
RLM1	YPL089C	SIS2	P36024	562 aa		3.04	□□□□□ -1.92
RLM1	YPL089C	PRP43	P53131	767 aa	Known RBP	3.04	□□□□□ -1.92
RLM1	YPL089C	HEH2	Q03281	663 aa		3.04	□□□□□ -1.92
RLM1	YPL089C	TTI1	P36097	1038 aa		3.03	□□□□□ -1.92
RLM1	YPL089C	SPO74	P45819	413 aa		3.03	□□□□□ -1.92
RLM1	YPL089C	ECL1	P48235	211 aa		3.03	□□□□□ -1.92
RLM1	YPL089C	AIM9	P40053	627 aa	Known RBP	3.03	□□□□□ -1.92
RLM1	YPL089C	YFL034W	P43564	1073 aa		3.03	□□□□□ -1.92
RLM1	YPL089C	TSC13	Q99190	310 aa		3.03	□□□□□ -1.92
RLM1	YPL089C	LEU1	P07264	779 aa	Known RBP	3.02	□□□□□ -1.93
RLM1	YPL089C	SWI5	P08153	709 aa		3.02	□□□□□ -1.93
RLM1	YPL089C	NGR1	P32831	672 aa	Known RBP	3.02	□□□□□ -1.93
RLM1	YPL089C	PDI1	P17967	522 aa	Known RBP	3.02	□□□□□ -1.93
RLM1	YPL089C	TAF1	P46677	1066 aa		3.02	□□□□□ -1.93
RLM1	YPL089C	RPS6A	P0CX37	236 aa	Known RBP	3.01	□□□□□ -1.93
RLM1	YPL089C	RPS6B	P0CX38	236 aa	Predicted RBP	3.01	□□□□□ -1.93
RLM1	YPL089C	PHO87	P25360	923 aa		3.01	□□□□□ -1.93
RLM1	YPL089C	NTH2	P35172	780 aa		3.01	□□□□□ -1.93
RLM1	YPL089C	PRK1	P40494	810 aa		3.01	□□□□□ -1.93
RLM1	YPL089C	KTR7	P40504	517 aa		3.01	□□□□□ -1.93
RLM1	YPL089C	ACS2	P52910	683 aa	Known RBP	3.01	□□□□□ -1.93
RLM1	YPL089C	YPQ2	Q06328	317 aa		3.01	□□□□□ -1.93
RLM1	YPL089C	GAL2	P13181	574 aa		3	□□□□□ -1.93
RLM1	YPL089C	RGP1	P16664	663 aa		3	□□□□□ -1.93
RLM1	YPL089C	TGL4	P36165	910 aa		3	□□□□□ -1.93
RLM1	YPL089C	HAP4	P14064	554 aa		3	□□□□□ -1.93
RLM1	YPL089C	CPS1	P27614	576 aa		3	□□□□□ -1.93
RLM1	YPL089C	POL12	P38121	705 aa	Predicted RBP	3	□□□□□ -1.93
RLM1	YPL089C	AKR1	P39010	764 aa		3	□□□□□ -1.93
RLM1	YPL089C	YTA6	P40328	754 aa		3	□□□□□ -1.93
RLM1	YPL089C	RLF2	Q12495	606 aa		3	□□□□□ -1.93
RLM1	YPL089C	MCM1	P11746	286 aa		2.98	□□□□□ -1.93
RLM1	YPL089C	LRG1	P35688	1017 aa		2.98	□□□□□ -1.93
RLM1	YPL089C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
RLM1	YPL089C	GAS4	Q08271	471 aa		2.98	□□□□□ -1.93
RLM1	YPL089C	GAS1	P22146	559 aa	Known RBP	2.98	□□□□□ -1.93
RLM1	YPL089C	PUP1	P25043	261 aa		2.98	□□□□□ -1.93
RLM1	YPL089C	ROM1	P53046	1155 aa		2.98	□□□□□ -1.93
RLM1	YPL089C	RPS31	P05759	152 aa	Known RBP	2.97	□□□□□ -1.93
RLM1	YPL089C	CYT1	P07143	309 aa		2.97	□□□□□ -1.93
RLM1	YPL089C	UBP1	P25037	809 aa		2.97	□□□□□ -1.93
RLM1	YPL089C	ECM23	Q02710	187 aa		2.97	□□□□□ -1.93
RLM1	YPL089C	SSA4	P22202	642 aa	Known RBP	2.97	□□□□□ -1.93
RLM1	YPL089C	HDA2	Q06629	674 aa		2.97	□□□□□ -1.93
RLM1	YPL089C	YNL165W	P53891	406 aa		2.96	□□□□□ -1.94
RLM1	YPL089C	NOB1	Q08444	459 aa	Known RBP	2.96	□□□□□ -1.94
RLM1	YPL089C	VAN1	P23642	535 aa		2.95	□□□□□ -1.94
RLM1	YPL089C	MSB1	P21339	1137 aa	Known RBP	2.95	□□□□□ -1.94
RLM1	YPL089C	NAM7	P30771	971 aa	Known RBP	2.95	□□□□□ -1.94
RLM1	YPL089C	UBX7	P38349	436 aa		2.95	□□□□□ -1.94
RLM1	YPL089C	HXT5	P38695	592 aa		2.95	□□□□□ -1.94
RLM1	YPL089C	ALD2	P47771	506 aa		2.95	□□□□□ -1.94
RLM1	YPL089C	GSF2	Q04697	403 aa	Known RBP	2.95	□□□□□ -1.94
RLM1	YPL089C	Q0182	Q9ZZW1	134 aa		2.95	□□□□□ -1.94
RLM1	YPL089C	SUB2	Q07478	446 aa	Known RBP	2.94	□□□□□ -1.94
RLM1	YPL089C	DFG16	Q99234	619 aa		2.94	□□□□□ -1.94
RLM1	YPL089C	SUV3	P32580	737 aa		2.93	□□□□□ -1.94
RLM1	YPL089C	YML083C	Q04526	418 aa		2.93	□□□□□ -1.94
RLM1	YPL089C	TRS33	Q99394	268 aa		2.93	□□□□□ -1.94
RLM1	YPL089C	MLF3	P32047	452 aa		2.93	□□□□□ -1.94
RLM1	YPL089C	NCL1	P38205	684 aa	Known RBP	2.93	□□□□□ -1.94
RLM1	YPL089C	PUF6	Q04373	656 aa	Known RBP	2.93	□□□□□ -1.94
RLM1	YPL089C	UTP4	Q06679	776 aa	Known RBP	2.93	□□□□□ -1.94
RLM1	YPL089C	SLP1	Q12232	587 aa		2.93	□□□□□ -1.94
RLM1	YPL089C	NFS1	P25374	497 aa		2.92	□□□□□ -1.94
RLM1	YPL089C	SCD5	P34758	872 aa		2.92	□□□□□ -1.94
RLM1	YPL089C	CWH41	P53008	833 aa		2.92	□□□□□ -1.94
RLM1	YPL089C	SDH1	Q00711	640 aa		2.92	□□□□□ -1.94
RLM1	YPL089C	CWC15	Q03772	175 aa	Known RBP	2.92	□□□□□ -1.94
RLM1	YPL089C	CAB1	Q04430	367 aa		2.91	□□□□□ -1.94
RLM1	YPL089C	TY1A-NL1	Q12391	440 aa	Known RBP	2.91	□□□□□ -1.94
RLM1	YPL089C	KAP122	P32767	1081 aa		2.9	□□□□□ -1.94
RLM1	YPL089C	YBR197C	P38306	217 aa		2.9	□□□□□ -1.94
RLM1	YPL089C	ALD4	P46367	519 aa	Known RBP	2.9	□□□□□ -1.94
RLM1	YPL089C	PUN1	Q06991	263 aa		2.9	□□□□□ -1.94
RLM1	YPL089C	SRS2	P12954	1174 aa		2.9	□□□□□ -1.95
RLM1	YPL089C	SKP1	P52286	194 aa		2.9	□□□□□ -1.95
RLM1	YPL089C	MTO1	P53070	669 aa		2.9	□□□□□ -1.95
RLM1	YPL089C	REC8	Q12188	680 aa		2.9	□□□□□ -1.95
RLM1	YPL089C	MRPL33	P20084	86 aa		2.89	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 92.1 ms