RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C CWH41P53008 833 aa6.24□□□□□ -1.41
VPS21YOR089C SVF1Q05515 481 aa6.24□□□□□ -1.41
VPS21YOR089C TRL1P09880 827 aaKnown RBP6.23□□□□□ -1.41
VPS21YOR089C PDC6P26263 563 aaKnown RBP6.23□□□□□ -1.41
VPS21YOR089C ACF4P47129 309 aa6.23□□□□□ -1.41
VPS21YOR089C NAP1P25293 417 aaKnown RBP6.22□□□□□ -1.41
VPS21YOR089C TPS3P38426 1054 aaKnown RBP6.22□□□□□ -1.41
VPS21YOR089C THI12P42883 340 aa6.22□□□□□ -1.41
VPS21YOR089C THI5P43534 340 aa6.22□□□□□ -1.41
VPS21YOR089C POL32P47110 350 aa6.22□□□□□ -1.41
VPS21YOR089C THI11P47183 340 aa6.22□□□□□ -1.41
VPS21YOR089C ORC1P54784 914 aaPredicted RBP6.22□□□□□ -1.41
VPS21YOR089C THI13Q07748 340 aa6.22□□□□□ -1.41
VPS21YOR089C MGE1P38523 228 aa6.21□□□□□ -1.42
VPS21YOR089C GLO3P38682 493 aaKnown RBP6.21□□□□□ -1.42
VPS21YOR089C AIM9P40053 627 aaKnown RBP6.21□□□□□ -1.42
VPS21YOR089C MDJ2P42834 146 aa6.21□□□□□ -1.42
VPS21YOR089C CCT8P47079 568 aaKnown RBP6.2□□□□□ -1.42
VPS21YOR089C GPM1P00950 247 aaKnown RBP6.19□□□□□ -1.42
VPS21YOR089C MRPL16P38064 232 aa6.19□□□□□ -1.42
VPS21YOR089C YNL165WP53891 406 aa6.19□□□□□ -1.42
VPS21YOR089C TDA6Q06466 467 aa6.19□□□□□ -1.42
VPS21YOR089C UBP1P25037 809 aa6.18□□□□□ -1.42
VPS21YOR089C BOL3P39724 118 aa6.18□□□□□ -1.42
VPS21YOR089C QDR1P40475 563 aa6.18□□□□□ -1.42
VPS21YOR089C SPR3P41901 512 aa6.18□□□□□ -1.42
VPS21YOR089C ALD4P46367 519 aaKnown RBP6.18□□□□□ -1.42
VPS21YOR089C RPS6AP0CX37 236 aaKnown RBP6.17□□□□□ -1.42
VPS21YOR089C RPS6BP0CX38 236 aaPredicted RBP6.17□□□□□ -1.42
VPS21YOR089C NTH2P35172 780 aa6.17□□□□□ -1.42
VPS21YOR089C ALD2P47771 506 aa6.17□□□□□ -1.42
VPS21YOR089C STB3Q12427 513 aa6.17□□□□□ -1.42
VPS21YOR089C YPR053CQ6Q5F3 151 aa6.17□□□□□ -1.42
VPS21YOR089C CYT1P07143 309 aa6.16□□□□□ -1.42
VPS21YOR089C LSO1Q3E827 93 aa6.16□□□□□ -1.42
VPS21YOR089C LEU1P07264 779 aaKnown RBP6.15□□□□□ -1.42
VPS21YOR089C FPS1P23900 669 aa6.15□□□□□ -1.42
VPS21YOR089C NUT2Q06213 157 aa6.15□□□□□ -1.42
VPS21YOR089C NGR1P32831 672 aaKnown RBP6.14□□□□□ -1.43
VPS21YOR089C SKN7P38889 622 aa6.14□□□□□ -1.43
VPS21YOR089C RRP15Q06511 250 aaPredicted RBP6.14□□□□□ -1.43
VPS21YOR089C MCM1P11746 286 aa6.13□□□□□ -1.43
VPS21YOR089C TY1A-DR2Q03964 440 aaKnown RBP6.13□□□□□ -1.43
VPS21YOR089C WHI5Q12416 295 aa6.13□□□□□ -1.43
VPS21YOR089C MSC7P38694 644 aa6.12□□□□□ -1.43
VPS21YOR089C UFD2P54860 961 aa6.12□□□□□ -1.43
VPS21YOR089C OYE2Q03558 400 aaKnown RBP6.12□□□□□ -1.43
VPS21YOR089C PDC5P16467 563 aaKnown RBP6.11□□□□□ -1.43
VPS21YOR089C ATE1P16639 503 aa6.11□□□□□ -1.43
VPS21YOR089C YCK2P23292 546 aaKnown RBP6.11□□□□□ -1.43
VPS21YOR089C MCX1P38323 520 aaPredicted RBP6.11□□□□□ -1.43
VPS21YOR089C YNR014WP53719 212 aa6.11□□□□□ -1.43
VPS21YOR089C TRS120Q04183 1289 aa6.11□□□□□ -1.43
VPS21YOR089C MLF3P32047 452 aa6.1□□□□□ -1.43
VPS21YOR089C GCD6P32501 712 aaKnown RBP6.1□□□□□ -1.43
VPS21YOR089C SEC8P32855 1065 aa6.1□□□□□ -1.43
VPS21YOR089C YMR187CQ03236 431 aa6.1□□□□□ -1.43
VPS21YOR089C FRT1Q99332 602 aa6.1□□□□□ -1.43
VPS21YOR089C KNS1P32350 737 aaPredicted RBP6.09□□□□□ -1.43
VPS21YOR089C SUV3P32580 737 aa6.09□□□□□ -1.43
VPS21YOR089C YJR107WP47145 328 aa6.09□□□□□ -1.43
VPS21YOR089C NNF1P47149 201 aa6.09□□□□□ -1.43
VPS21YOR089C YTA7P40340 1379 aa6.08□□□□□ -1.44
VPS21YOR089C RGP1P16664 663 aa6.08□□□□□ -1.44
VPS21YOR089C BOI2P39969 1040 aa6.08□□□□□ -1.44
VPS21YOR089C YDR215CQ12240 137 aa6.08□□□□□ -1.44
VPS21YOR089C Q0182Q9ZZW1 134 aa6.08□□□□□ -1.44
VPS21YOR089C MET4P32389 672 aa6.07□□□□□ -1.44
VPS21YOR089C ISC10P32645 267 aa6.07□□□□□ -1.44
VPS21YOR089C YBR197CP38306 217 aa6.07□□□□□ -1.44
VPS21YOR089C SLN1P39928 1220 aaPredicted RBP6.07□□□□□ -1.44
VPS21YOR089C FOX2Q02207 900 aaKnown RBP6.06□□□□□ -1.44
VPS21YOR089C JIP5Q06214 492 aaPredicted RBP6.06□□□□□ -1.44
VPS21YOR089C SCD5P34758 872 aa6.05□□□□□ -1.44
VPS21YOR089C RMD1Q03441 430 aa6.05□□□□□ -1.44
VPS21YOR089C FPR4Q06205 392 aaPredicted RBP6.05□□□□□ -1.44
VPS21YOR089C APC11Q12157 165 aa6.05□□□□□ -1.44
VPS21YOR089C MET1P36150 593 aa6.04□□□□□ -1.44
VPS21YOR089C OCA5P38738 679 aa6.04□□□□□ -1.44
VPS21YOR089C YTA6P40328 754 aa6.04□□□□□ -1.44
VPS21YOR089C SAM37P50110 327 aa6.04□□□□□ -1.44
VPS21YOR089C CAB1Q04430 367 aa6.04□□□□□ -1.44
VPS21YOR089C SMC1P32908 1225 aa6.03□□□□□ -1.44
VPS21YOR089C OXR1Q08952 273 aa6.03□□□□□ -1.44
VPS21YOR089C PHO4P07270 312 aaKnown RBP6.02□□□□□ -1.45
VPS21YOR089C CLN2P20438 545 aa6.02□□□□□ -1.45
VPS21YOR089C RPT1P33299 467 aaKnown RBP6.02□□□□□ -1.45
VPS21YOR089C VPS35P34110 944 aa6.02□□□□□ -1.45
VPS21YOR089C BOI1P38041 980 aaKnown RBP6.02□□□□□ -1.45
VPS21YOR089C YBR287WP38355 427 aa6.02□□□□□ -1.45
VPS21YOR089C MAD1P40957 749 aa6.02□□□□□ -1.45
VPS21YOR089C YNL011CP53980 444 aa6.02□□□□□ -1.45
VPS21YOR089C MCA1Q08601 432 aa6.02□□□□□ -1.45
VPS21YOR089C MRPL33P20084 86 aa6.01□□□□□ -1.45
VPS21YOR089C HXT5P38695 592 aa6.01□□□□□ -1.45
VPS21YOR089C CIC1P38779 376 aaKnown RBP6.01□□□□□ -1.45
VPS21YOR089C NRD1P53617 575 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
VPS21YOR089C CDC55Q00362 526 aa6.01□□□□□ -1.45
VPS21YOR089C AMN1P38285 549 aaPredicted RBP6□□□□□ -1.45
VPS21YOR089C PRK1P40494 810 aa6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms