RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C ATG19P35193 415 aa1.24□□□□□ -2.21
RKR1YMR247C SOH1P38633 127 aa1.24□□□□□ -2.21
RKR1YMR247C SSN3P39073 555 aa1.24□□□□□ -2.21
RKR1YMR247C ICP55P40051 511 aa1.24□□□□□ -2.21
RKR1YMR247C ALA1P40825 983 aaKnown RBP1.24□□□□□ -2.21
RKR1YMR247C YDR444WQ04093 687 aa1.24□□□□□ -2.21
RKR1YMR247C HRK1Q08732 759 aaKnown RBP1.24□□□□□ -2.21
RKR1YMR247C YLL058WQ12198 575 aa1.24□□□□□ -2.21
RKR1YMR247C CDC19P00549 500 aaKnown RBP1.23□□□□□ -2.21
RKR1YMR247C CLN2P20438 545 aa1.23□□□□□ -2.21
RKR1YMR247C PRP5P21372 849 aaPredicted RBP1.23□□□□□ -2.21
RKR1YMR247C VMA4P22203 233 aaKnown RBP1.23□□□□□ -2.21
RKR1YMR247C RSC6P25632 483 aa1.23□□□□□ -2.21
RKR1YMR247C MTR4P47047 1073 aaKnown RBP1.23□□□□□ -2.21
RKR1YMR247C YJR115WP47152 169 aa1.23□□□□□ -2.21
RKR1YMR247C TPO2P53283 614 aa1.23□□□□□ -2.21
RKR1YMR247C YNL011CP53980 444 aa1.23□□□□□ -2.21
RKR1YMR247C YPL062WQ02781 134 aa1.23□□□□□ -2.21
RKR1YMR247C ISR1Q06098 443 aaKnown RBP1.23□□□□□ -2.21
RKR1YMR247C SYT1Q06836 1226 aa1.23□□□□□ -2.21
RKR1YMR247C YPR015CQ12531 247 aa1.23□□□□□ -2.21
RKR1YMR247C SAC7P17121 654 aa1.23□□□□□ -2.21
RKR1YMR247C KTR1P27810 393 aaKnown RBP1.23□□□□□ -2.21
RKR1YMR247C TRK2P28584 889 aa1.23□□□□□ -2.21
RKR1YMR247C HXT8P40886 569 aa1.23□□□□□ -2.21
RKR1YMR247C YJL007CP47080 104 aa1.23□□□□□ -2.21
RKR1YMR247C YMR265CQ03508 461 aaKnown RBP1.23□□□□□ -2.21
RKR1YMR247C SOG2Q08817 791 aa1.23□□□□□ -2.21
RKR1YMR247C SWI5P08153 709 aa1.23□□□□□ -2.21
RKR1YMR247C MSB1P21339 1137 aaKnown RBP1.23□□□□□ -2.21
RKR1YMR247C NNK1P36003 928 aa1.23□□□□□ -2.21
RKR1YMR247C ECM2P38241 364 aaKnown RBP1.23□□□□□ -2.21
RKR1YMR247C SUB2Q07478 446 aaKnown RBP1.23□□□□□ -2.21
RKR1YMR247C YIG1Q08956 461 aa1.23□□□□□ -2.21
RKR1YMR247C MET32Q12041 191 aa1.23□□□□□ -2.21
RKR1YMR247C MRPL33P20084 86 aa1.22□□□□□ -2.21
RKR1YMR247C SRO9P25567 434 aaKnown RBP1.22□□□□□ -2.21
RKR1YMR247C BIO2P32451 375 aa1.22□□□□□ -2.21
RKR1YMR247C ATG14P38270 344 aa1.22□□□□□ -2.21
RKR1YMR247C NOP7P53261 605 aaKnown RBP1.22□□□□□ -2.21
RKR1YMR247C ESF1Q06344 628 aaKnown RBP1.22□□□□□ -2.21
RKR1YMR247C HDA3Q06623 655 aa1.22□□□□□ -2.21
RKR1YMR247C NHA1Q99271 985 aa1.22□□□□□ -2.21
RKR1YMR247C RAD27P26793 382 aa1.22□□□□□ -2.21
RKR1YMR247C RRT14P40470 206 aa1.22□□□□□ -2.21
RKR1YMR247C IOC3P43596 787 aa1.22□□□□□ -2.21
RKR1YMR247C ROG3P43602 733 aa1.22□□□□□ -2.21
RKR1YMR247C YGL081WP53156 320 aa1.22□□□□□ -2.21
RKR1YMR247C NOG1Q02892 647 aaKnown RBP1.22□□□□□ -2.21
RKR1YMR247C TRS120Q04183 1289 aa1.22□□□□□ -2.21
RKR1YMR247C GSF2Q04697 403 aaKnown RBP1.22□□□□□ -2.21
RKR1YMR247C DFG5Q05031 458 aa1.22□□□□□ -2.21
RKR1YMR247C YPL260WQ08977 551 aa1.22□□□□□ -2.21
RKR1YMR247C ENO1P00924 437 aaKnown RBP1.22□□□□□ -2.21
RKR1YMR247C YJU3P28321 313 aa1.22□□□□□ -2.21
RKR1YMR247C MET22P32179 357 aa1.22□□□□□ -2.21
RKR1YMR247C YKL077WP36081 392 aa1.22□□□□□ -2.21
RKR1YMR247C HXT5P38695 592 aa1.22□□□□□ -2.21
RKR1YMR247C OSW7P43611 510 aa1.22□□□□□ -2.21
RKR1YMR247C DMA2P53924 522 aa1.22□□□□□ -2.21
RKR1YMR247C COG8Q04632 607 aa1.22□□□□□ -2.21
RKR1YMR247C MSC6Q08818 692 aaKnown RBP1.22□□□□□ -2.21
RKR1YMR247C FUS1P11710 512 aa1.22□□□□□ -2.21
RKR1YMR247C SDH2P21801 266 aa1.22□□□□□ -2.21
RKR1YMR247C YKR078WP36158 585 aaKnown RBP1.22□□□□□ -2.21
RKR1YMR247C CST6P40535 587 aa1.22□□□□□ -2.21
RKR1YMR247C ECL1P48235 211 aa1.22□□□□□ -2.21
RKR1YMR247C ARI1P53111 347 aaKnown RBP1.22□□□□□ -2.21
RKR1YMR247C OPT2Q06593 877 aa1.22□□□□□ -2.21
RKR1YMR247C ATG13Q06628 738 aa1.22□□□□□ -2.21
RKR1YMR247C AIM46P38885 310 aa1.21□□□□□ -2.22
RKR1YMR247C UTP14Q04500 899 aaKnown RBP1.21□□□□□ -2.22
RKR1YMR247C PUN1Q06991 263 aa1.21□□□□□ -2.22
RKR1YMR247C NBA1Q08229 501 aaKnown RBP1.21□□□□□ -2.22
RKR1YMR247C TCB1Q12466 1186 aa1.21□□□□□ -2.22
RKR1YMR247C SLA1P32790 1244 aa1.21□□□□□ -2.22
RKR1YMR247C MDL2P33311 773 aa1.21□□□□□ -2.22
RKR1YMR247C SSF1P38789 453 aaPredicted RBP1.21□□□□□ -2.22
RKR1YMR247C NIT1P40447 199 aa1.21□□□□□ -2.22
RKR1YMR247C ALD4P46367 519 aaKnown RBP1.21□□□□□ -2.22
RKR1YMR247C YNL108CP53929 270 aa1.21□□□□□ -2.22
RKR1YMR247C MEC3Q02574 474 aa1.21□□□□□ -2.22
RKR1YMR247C BSC2Q05611 235 aa1.21□□□□□ -2.22
RKR1YMR247C MLF3P32047 452 aa1.21□□□□□ -2.22
RKR1YMR247C MAE1P36013 669 aaKnown RBP1.21□□□□□ -2.22
RKR1YMR247C CCZ1P38273 704 aa1.21□□□□□ -2.22
RKR1YMR247C RAD55P38953 406 aa1.21□□□□□ -2.22
RKR1YMR247C ATG32P40458 529 aa1.21□□□□□ -2.22
RKR1YMR247C PBP1P53297 722 aaKnown RBP1.21□□□□□ -2.22
RKR1YMR247C PNP1Q05788 311 aa1.21□□□□□ -2.22
RKR1YMR247C AI3P03877 415 aa1.21□□□□□ -2.22
RKR1YMR247C RDS2P19541 446 aaKnown RBP1.21□□□□□ -2.22
RKR1YMR247C PDC6P26263 563 aaKnown RBP1.21□□□□□ -2.22
RKR1YMR247C ELM1P32801 640 aa1.21□□□□□ -2.22
RKR1YMR247C DOM34P33309 386 aa1.21□□□□□ -2.22
RKR1YMR247C SKN7P38889 622 aa1.21□□□□□ -2.22
RKR1YMR247C YIL165CP40446 119 aa1.21□□□□□ -2.22
RKR1YMR247C ATG36P46983 293 aa1.21□□□□□ -2.22
RKR1YMR247C ACS2P52910 683 aaKnown RBP1.21□□□□□ -2.22
RKR1YMR247C BIO5P53744 561 aaKnown RBP1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms