RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C STV1P37296 890 aa12.43□□□□□ -0.42
SHB17YKR043C VPS4P52917 437 aa12.43□□□□□ -0.42
SHB17YKR043C CRF1Q04930 467 aa12.43□□□□□ -0.42
SHB17YKR043C AIM7Q12156 149 aa12.42□□□□□ -0.42
SHB17YKR043C AI2P03876 854 aa12.41□□□□□ -0.42
SHB17YKR043C ARG82P07250 355 aa12.41□□□□□ -0.42
SHB17YKR043C YGR117CP53270 476 aa12.41□□□□□ -0.42
SHB17YKR043C WRS1Q12109 432 aaKnown RBP12.41□□□□□ -0.42
SHB17YKR043C PSF3Q12146 194 aa12.41□□□□□ -0.42
SHB17YKR043C GLO3P38682 493 aaKnown RBP12.4□□□□□ -0.42
SHB17YKR043C HPR1P17629 752 aaKnown RBP12.39□□□□□ -0.43
SHB17YKR043C VHR2P40041 505 aa12.39□□□□□ -0.43
SHB17YKR043C EMP47P43555 445 aa12.39□□□□□ -0.43
SHB17YKR043C JJJ2P46997 583 aa12.39□□□□□ -0.43
SHB17YKR043C YNL193WP53870 558 aa12.39□□□□□ -0.43
SHB17YKR043C NCB2Q92317 146 aa12.39□□□□□ -0.43
SHB17YKR043C RPS7AP26786 190 aaKnown RBP12.38□□□□□ -0.43
SHB17YKR043C RPT3P33298 428 aaKnown RBP12.38□□□□□ -0.43
SHB17YKR043C RPN7Q06103 429 aaKnown RBP12.38□□□□□ -0.43
SHB17YKR043C RRI2Q12348 645 aa12.38□□□□□ -0.43
SHB17YKR043C NMD2P38798 1089 aaKnown RBP12.37□□□□□ -0.43
SHB17YKR043C HAL5P38970 855 aaKnown RBP12.37□□□□□ -0.43
SHB17YKR043C YFH7P43591 353 aa12.37□□□□□ -0.43
SHB17YKR043C SEN54Q02825 467 aaPredicted RBP12.37□□□□□ -0.43
SHB17YKR043C ACK1Q07622 623 aaPredicted RBP12.36□□□□□ -0.43
SHB17YKR043C PIF1P07271 859 aa12.35□□□□□ -0.43
SHB17YKR043C KTR3P38130 404 aaPredicted RBP12.35□□□□□ -0.43
SHB17YKR043C YIR042CP40586 236 aa12.35□□□□□ -0.43
SHB17YKR043C UTP7P40055 554 aaKnown RBP12.34□□□□□ -0.43
SHB17YKR043C PEA2P40091 420 aa12.34□□□□□ -0.43
SHB17YKR043C YGL242CP53066 181 aa12.34□□□□□ -0.43
SHB17YKR043C INM2Q05533 292 aa12.34□□□□□ -0.43
SHB17YKR043C BDP1P46678 594 aa12.32□□□□□ -0.44
SHB17YKR043C MTC3P53077 123 aa12.32□□□□□ -0.44
SHB17YKR043C NOT3P06102 836 aaKnown RBP12.31□□□□□ -0.44
SHB17YKR043C CBP1P07252 654 aa12.31□□□□□ -0.44
SHB17YKR043C SNF3P10870 884 aa12.31□□□□□ -0.44
SHB17YKR043C PTK1P36002 662 aaPredicted RBP12.31□□□□□ -0.44
SHB17YKR043C RRD1P40454 393 aaKnown RBP12.31□□□□□ -0.44
SHB17YKR043C YIL089WP40500 205 aa12.31□□□□□ -0.44
SHB17YKR043C YJL171CP46992 396 aa12.31□□□□□ -0.44
SHB17YKR043C PUS6P53294 404 aa12.31□□□□□ -0.44
SHB17YKR043C MLC1P53141 149 aa12.3□□□□□ -0.44
SHB17YKR043C CWC15Q03772 175 aaKnown RBP12.3□□□□□ -0.44
SHB17YKR043C PDR18P53756 1333 aa12.3□□□□□ -0.44
SHB17YKR043C ECM21P38167 1117 aaKnown RBP12.29□□□□□ -0.44
SHB17YKR043C ALO1P54783 526 aaKnown RBP12.29□□□□□ -0.44
SHB17YKR043C APL6P46682 809 aa12.28□□□□□ -0.44
SHB17YKR043C FLO1P32768 1537 aa12.27□□□□□ -0.44
SHB17YKR043C MDL2P33311 773 aa12.27□□□□□ -0.45
SHB17YKR043C EPS1P40557 701 aa12.26□□□□□ -0.45
SHB17YKR043C TYW1Q08960 810 aaKnown RBP12.26□□□□□ -0.45
SHB17YKR043C CYB2P00175 591 aa12.25□□□□□ -0.45
SHB17YKR043C CDC16P09798 840 aa12.25□□□□□ -0.45
SHB17YKR043C BOI1P38041 980 aaKnown RBP12.25□□□□□ -0.45
SHB17YKR043C GRX7P38068 203 aa12.25□□□□□ -0.45
SHB17YKR043C FPR3P38911 411 aaKnown RBP12.25□□□□□ -0.45
SHB17YKR043C RFC1P38630 861 aaKnown RBP12.24□□□□□ -0.45
SHB17YKR043C ETP1P38748 585 aaKnown RBP12.24□□□□□ -0.45
SHB17YKR043C NSG2P53898 299 aa12.24□□□□□ -0.45
SHB17YKR043C NIT1P40447 199 aa12.23□□□□□ -0.45
SHB17YKR043C CSR2Q12734 1121 aa12.23□□□□□ -0.45
SHB17YKR043C PNT1P38969 423 aa12.22□□□□□ -0.45
SHB17YKR043C NKP2Q06162 153 aa12.22□□□□□ -0.45
SHB17YKR043C PIB2P53191 635 aa12.21□□□□□ -0.45
SHB17YKR043C MRPS35P53292 345 aa12.21□□□□□ -0.45
SHB17YKR043C AAD16Q02895 342 aa12.21□□□□□ -0.45
SHB17YKR043C RMD1Q03441 430 aa12.21□□□□□ -0.45
SHB17YKR043C YMR147WP40218 223 aaKnown RBP12.2□□□□□ -0.46
SHB17YKR043C PIP2P52960 996 aa12.2□□□□□ -0.46
SHB17YKR043C BRE1Q07457 700 aaKnown RBP12.2□□□□□ -0.46
SHB17YKR043C TOM1Q03280 3268 aa12.19□□□□□ -0.46
SHB17YKR043C NPL4P33755 580 aa12.19□□□□□ -0.46
SHB17YKR043C GEF1P37020 779 aa12.19□□□□□ -0.46
SHB17YKR043C PBY1P38254 753 aa12.19□□□□□ -0.46
SHB17YKR043C RRT6P53117 311 aaPredicted RBP12.19□□□□□ -0.46
SHB17YKR043C ECM16Q04217 1267 aaKnown RBP12.19□□□□□ -0.46
SHB17YKR043C GSC2P40989 1895 aa12.19□□□□□ -0.46
SHB17YKR043C GAL2P13181 574 aa12.18□□□□□ -0.46
SHB17YKR043C RAD53P22216 821 aa12.18□□□□□ -0.46
SHB17YKR043C KEL1P38853 1164 aaKnown RBP12.18□□□□□ -0.46
SHB17YKR043C KAR5Q04746 504 aa12.18□□□□□ -0.46
SHB17YKR043C ADP1P25371 1049 aa12.17□□□□□ -0.46
SHB17YKR043C OSH3P38713 996 aaKnown RBP12.17□□□□□ -0.46
SHB17YKR043C IRC8P47046 822 aa12.17□□□□□ -0.46
SHB17YKR043C KTR1P27810 393 aaKnown RBP12.16□□□□□ -0.46
SHB17YKR043C NOP2P40991 618 aaKnown RBP12.16□□□□□ -0.46
SHB17YKR043C DUS1P53759 423 aaKnown RBP12.16□□□□□ -0.46
SHB17YKR043C PCL8Q08966 492 aa12.16□□□□□ -0.46
SHB17YKR043C PMA1P05030 918 aaKnown RBP12.15□□□□□ -0.46
SHB17YKR043C HVG1P0CE11 249 aa12.15□□□□□ -0.46
SHB17YKR043C PCS60P38137 543 aaKnown RBP RIP-Chip data12.15□□□□□ -0.46not detected
SHB17YKR043C BSD2P38356 321 aa12.15□□□□□ -0.46
SHB17YKR043C IOC3P43596 787 aa12.15□□□□□ -0.46
SHB17YKR043C BBC1P47068 1157 aa12.15□□□□□ -0.46
SHB17YKR043C LAM4P38800 1345 aa12.13□□□□□ -0.47
SHB17YKR043C PFK2P16862 959 aaKnown RBP RIP-Chip data12.13□□□□□ -0.47not detected
SHB17YKR043C TPS3P38426 1054 aaKnown RBP12.13□□□□□ -0.47
SHB17YKR043C MSH4P40965 878 aaPredicted RBP12.13□□□□□ -0.47
SHB17YKR043C ENP2P48234 707 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms