RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C JJJ2P46997 583 aa14.17□□□□□ -0.14
YKR040CYKR040C SEN54Q02825 467 aaPredicted RBP14.17□□□□□ -0.14
YKR040CYKR040C PSF3Q12146 194 aa14.17□□□□□ -0.14
YKR040CYKR040C HPR1P17629 752 aaKnown RBP14.16□□□□□ -0.14
YKR040CYKR040C STV1P37296 890 aa14.16□□□□□ -0.14
YKR040CYKR040C RRD1P40454 393 aaKnown RBP14.16□□□□□ -0.14
YKR040CYKR040C EMP47P43555 445 aa14.16□□□□□ -0.14
YKR040CYKR040C POL32P47110 350 aa14.16□□□□□ -0.14
YKR040CYKR040C ARG82P07250 355 aa14.15□□□□□ -0.14
YKR040CYKR040C ILV3P39522 585 aaKnown RBP14.15□□□□□ -0.14
YKR040CYKR040C WRS1Q12109 432 aaKnown RBP14.15□□□□□ -0.14
YKR040CYKR040C RRI2Q12348 645 aa14.13□□□□□ -0.15
YKR040CYKR040C NCB2Q92317 146 aa14.13□□□□□ -0.15
YKR040CYKR040C FLO11P08640 1367 aa14.12□□□□□ -0.15
YKR040CYKR040C AI2P03876 854 aa14.12□□□□□ -0.15
YKR040CYKR040C RPS7AP26786 190 aaKnown RBP14.12□□□□□ -0.15
YKR040CYKR040C PEA2P40091 420 aa14.12□□□□□ -0.15
YKR040CYKR040C YFH7P43591 353 aa14.12□□□□□ -0.15
YKR040CYKR040C RPT3P33298 428 aaKnown RBP14.11□□□□□ -0.15
YKR040CYKR040C GLO3P38682 493 aaKnown RBP14.11□□□□□ -0.15
YKR040CYKR040C YNL193WP53870 558 aa14.11□□□□□ -0.15
YKR040CYKR040C ACK1Q07622 623 aaPredicted RBP14.11□□□□□ -0.15
YKR040CYKR040C FIG2P25653 1609 aa14.11□□□□□ -0.15
YKR040CYKR040C DUR1,2P32528 1835 aaKnown RBP14.11□□□□□ -0.15
YKR040CYKR040C HAL5P38970 855 aaKnown RBP14.09□□□□□ -0.15
YKR040CYKR040C YIL089WP40500 205 aa14.09□□□□□ -0.15
YKR040CYKR040C CWC15Q03772 175 aaKnown RBP14.09□□□□□ -0.15
YKR040CYKR040C RPN7Q06103 429 aaKnown RBP14.09□□□□□ -0.15
YKR040CYKR040C CBP1P07252 654 aa14.08□□□□□ -0.16
YKR040CYKR040C PIF1P07271 859 aa14.08□□□□□ -0.16
YKR040CYKR040C INM2Q05533 292 aa14.08□□□□□ -0.16
YKR040CYKR040C YIR042CP40586 236 aa14.07□□□□□ -0.16
YKR040CYKR040C NMD2P38798 1089 aaKnown RBP14.06□□□□□ -0.16
YKR040CYKR040C YGL242CP53066 181 aa14.06□□□□□ -0.16
YKR040CYKR040C MTC3P53077 123 aa14.06□□□□□ -0.16
YKR040CYKR040C PUS6P53294 404 aa14.06□□□□□ -0.16
YKR040CYKR040C UTP7P40055 554 aaKnown RBP14.05□□□□□ -0.16
YKR040CYKR040C PTK1P36002 662 aaPredicted RBP14.04□□□□□ -0.16
YKR040CYKR040C BDP1P46678 594 aa14.04□□□□□ -0.16
YKR040CYKR040C YJL171CP46992 396 aa14.04□□□□□ -0.16
YKR040CYKR040C KTR3P38130 404 aaPredicted RBP14.03□□□□□ -0.16
YKR040CYKR040C MDL2P33311 773 aa14.01□□□□□ -0.17
YKR040CYKR040C APL6P46682 809 aa14.01□□□□□ -0.17
YKR040CYKR040C MLC1P53141 149 aa14.01□□□□□ -0.17
YKR040CYKR040C TYW1Q08960 810 aaKnown RBP14.01□□□□□ -0.17
YKR040CYKR040C NOT3P06102 836 aaKnown RBP14□□□□□ -0.17
YKR040CYKR040C SNF3P10870 884 aa14□□□□□ -0.17
YKR040CYKR040C PDR18P53756 1333 aa13.99□□□□□ -0.17
YKR040CYKR040C FPR3P38911 411 aaKnown RBP13.99□□□□□ -0.17
YKR040CYKR040C NIT1P40447 199 aa13.99□□□□□ -0.17
YKR040CYKR040C ALO1P54783 526 aaKnown RBP13.99□□□□□ -0.17
YKR040CYKR040C PNT1P38969 423 aa13.98□□□□□ -0.17
YKR040CYKR040C CYB2P00175 591 aa13.97□□□□□ -0.17
YKR040CYKR040C ECM21P38167 1117 aaKnown RBP13.97□□□□□ -0.17
YKR040CYKR040C ETP1P38748 585 aaKnown RBP13.97□□□□□ -0.17
YKR040CYKR040C AAD16Q02895 342 aa13.97□□□□□ -0.17
YKR040CYKR040C BOI1P38041 980 aaKnown RBP13.96□□□□□ -0.17
YKR040CYKR040C GRX7P38068 203 aa13.96□□□□□ -0.17
YKR040CYKR040C RRT6P53117 311 aaPredicted RBP13.96□□□□□ -0.17
YKR040CYKR040C GAL2P13181 574 aa13.95□□□□□ -0.18
YKR040CYKR040C RFC1P38630 861 aaKnown RBP13.95□□□□□ -0.18
YKR040CYKR040C CSR2Q12734 1121 aa13.95□□□□□ -0.18
YKR040CYKR040C PIP2P52960 996 aa13.93□□□□□ -0.18
YKR040CYKR040C DUS1P53759 423 aaKnown RBP13.93□□□□□ -0.18
YKR040CYKR040C BSD2P38356 321 aa13.92□□□□□ -0.18
YKR040CYKR040C NSG2P53898 299 aa13.92□□□□□ -0.18
YKR040CYKR040C RMD1Q03441 430 aa13.92□□□□□ -0.18
YKR040CYKR040C PBY1P38254 753 aa13.91□□□□□ -0.18
YKR040CYKR040C EPS1P40557 701 aa13.91□□□□□ -0.18
YKR040CYKR040C NOP2P40991 618 aaKnown RBP13.91□□□□□ -0.18
YKR040CYKR040C CDC16P09798 840 aa13.9□□□□□ -0.18
YKR040CYKR040C HVG1P0CE11 249 aa13.9□□□□□ -0.18
YKR040CYKR040C RAD53P22216 821 aa13.9□□□□□ -0.18
YKR040CYKR040C ADP1P25371 1049 aa13.9□□□□□ -0.18
YKR040CYKR040C NPL4P33755 580 aa13.9□□□□□ -0.18
YKR040CYKR040C PCS60P38137 543 aaKnown RBP RIP-Chip data13.9□□□□□ -0.18not detected
YKR040CYKR040C KEL1P38853 1164 aaKnown RBP13.9□□□□□ -0.18
YKR040CYKR040C PMA1P05030 918 aaKnown RBP13.89□□□□□ -0.19
YKR040CYKR040C GEF1P37020 779 aa13.89□□□□□ -0.19
YKR040CYKR040C PIB2P53191 635 aa13.89□□□□□ -0.19
YKR040CYKR040C BRE1Q07457 700 aaKnown RBP13.89□□□□□ -0.19
YKR040CYKR040C PCL8Q08966 492 aa13.89□□□□□ -0.19
YKR040CYKR040C TPS3P38426 1054 aaKnown RBP13.88□□□□□ -0.19
YKR040CYKR040C YMR147WP40218 223 aaKnown RBP13.88□□□□□ -0.19
YKR040CYKR040C NKP2Q06162 153 aa13.88□□□□□ -0.19
YKR040CYKR040C TOM1Q03280 3268 aa13.88□□□□□ -0.19
YKR040CYKR040C GSC2P40989 1895 aa13.87□□□□□ -0.19
YKR040CYKR040C YBL028CP38202 106 aa13.87□□□□□ -0.19
YKR040CYKR040C MRPS35P53292 345 aa13.87□□□□□ -0.19
YKR040CYKR040C ECM16Q04217 1267 aaKnown RBP13.87□□□□□ -0.19
YKR040CYKR040C TIF6Q12522 245 aaKnown RBP13.87□□□□□ -0.19
YKR040CYKR040C PFK2P16862 959 aaKnown RBP RIP-Chip data13.86□□□□□ -0.19not detected
YKR040CYKR040C IOC3P43596 787 aa13.86□□□□□ -0.19
YKR040CYKR040C IRC8P47046 822 aa13.86□□□□□ -0.19
YKR040CYKR040C OSH3P38713 996 aaKnown RBP13.85□□□□□ -0.19
YKR040CYKR040C ENP2P48234 707 aaKnown RBP13.85□□□□□ -0.19
YKR040CYKR040C KEL3Q08979 651 aaPredicted RBP13.85□□□□□ -0.19
YKR040CYKR040C KTR1P27810 393 aaKnown RBP13.84□□□□□ -0.19
YKR040CYKR040C KAR5Q04746 504 aa13.84□□□□□ -0.19
YKR040CYKR040C CST9Q06032 482 aa13.84□□□□□ -0.19
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms