RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C YML083CQ04526 418 aa6.75□□□□□ -1.33
SDS3YIL084C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
SDS3YIL084C TSC13Q99190 310 aa6.75□□□□□ -1.33
SDS3YIL084C PRY1P47032 299 aa6.74□□□□□ -1.33
SDS3YIL084C PDI1P17967 522 aaKnown RBP6.73□□□□□ -1.33
SDS3YIL084C AIM9P40053 627 aaKnown RBP6.73□□□□□ -1.33
SDS3YIL084C SPR3P41901 512 aa6.73□□□□□ -1.33
SDS3YIL084C ACS2P52910 683 aaKnown RBP6.73□□□□□ -1.33
SDS3YIL084C TY1A-DR2Q03964 440 aaKnown RBP6.73□□□□□ -1.33
SDS3YIL084C KNS1P32350 737 aaPredicted RBP6.72□□□□□ -1.33
SDS3YIL084C GAS4Q08271 471 aa6.72□□□□□ -1.33
SDS3YIL084C YPQ2Q06328 317 aa6.7□□□□□ -1.34
SDS3YIL084C TAF2P23255 1407 aa6.69□□□□□ -1.34
SDS3YIL084C CDC3P32457 520 aaKnown RBP6.69□□□□□ -1.34
SDS3YIL084C TAT1P38085 619 aa6.69□□□□□ -1.34
SDS3YIL084C MSC7P38694 644 aa6.69□□□□□ -1.34
SDS3YIL084C PUF6Q04373 656 aaKnown RBP6.69□□□□□ -1.34
SDS3YIL084C YCF1P39109 1515 aaKnown RBP6.68□□□□□ -1.34
SDS3YIL084C VAN1P23642 535 aa6.68□□□□□ -1.34
SDS3YIL084C NTH2P35172 780 aa6.68□□□□□ -1.34
SDS3YIL084C MET1P36150 593 aa6.68□□□□□ -1.34
SDS3YIL084C ROM1P53046 1155 aa6.68□□□□□ -1.34
SDS3YIL084C YNL165WP53891 406 aa6.68□□□□□ -1.34
SDS3YIL084C SKI3P17883 1432 aaKnown RBP6.67□□□□□ -1.34
SDS3YIL084C ALD2P47771 506 aa6.67□□□□□ -1.34
SDS3YIL084C LEU1P07264 779 aaKnown RBP6.66□□□□□ -1.34
SDS3YIL084C SWI5P08153 709 aa6.66□□□□□ -1.34
SDS3YIL084C RPS6AP0CX37 236 aaKnown RBP6.66□□□□□ -1.34
SDS3YIL084C RPS6BP0CX38 236 aaPredicted RBP6.66□□□□□ -1.34
SDS3YIL084C TRS33Q99394 268 aa6.65□□□□□ -1.34
SDS3YIL084C CYT1P07143 309 aa6.64□□□□□ -1.35
SDS3YIL084C CWH41P53008 833 aa6.63□□□□□ -1.35
SDS3YIL084C YPL034WQ03083 165 aa6.63□□□□□ -1.35
SDS3YIL084C UBP1P25037 809 aa6.62□□□□□ -1.35
SDS3YIL084C ALO1P54783 526 aaKnown RBP6.62□□□□□ -1.35
SDS3YIL084C CWC15Q03772 175 aaKnown RBP6.62□□□□□ -1.35
SDS3YIL084C PUN1Q06991 263 aa6.62□□□□□ -1.35
SDS3YIL084C MAC1P35192 417 aa6.61□□□□□ -1.35
SDS3YIL084C SRS2P12954 1174 aa6.6□□□□□ -1.35
SDS3YIL084C RGP1P16664 663 aa6.6□□□□□ -1.35
SDS3YIL084C SSK2P53599 1579 aa6.59□□□□□ -1.35
SDS3YIL084C NGR1P32831 672 aaKnown RBP6.58□□□□□ -1.36
SDS3YIL084C YML020WQ03722 664 aa6.58□□□□□ -1.36
SDS3YIL084C PNP1Q05788 311 aa6.58□□□□□ -1.36
SDS3YIL084C HAT1Q12341 374 aa6.58□□□□□ -1.36
SDS3YIL084C ESC1Q03661 1658 aaKnown RBP6.58□□□□□ -1.36
SDS3YIL084C ALD4P46367 519 aaKnown RBP6.57□□□□□ -1.36
SDS3YIL084C BUD9P53226 547 aa6.57□□□□□ -1.36
SDS3YIL084C KAR5Q04746 504 aa6.57□□□□□ -1.36
SDS3YIL084C FUR4P05316 633 aaKnown RBP6.56□□□□□ -1.36
SDS3YIL084C MCM1P11746 286 aa6.56□□□□□ -1.36
SDS3YIL084C MLF3P32047 452 aa6.56□□□□□ -1.36
SDS3YIL084C TPS3P38426 1054 aaKnown RBP6.56□□□□□ -1.36
SDS3YIL084C RRN6P32786 894 aa6.55□□□□□ -1.36
SDS3YIL084C SLD2P34252 453 aa6.55□□□□□ -1.36
SDS3YIL084C PGM2P37012 569 aaKnown RBP6.55□□□□□ -1.36
SDS3YIL084C SSF1P38789 453 aaPredicted RBP6.54□□□□□ -1.36
SDS3YIL084C INP52P50942 1183 aa6.54□□□□□ -1.36
SDS3YIL084C Q0182Q9ZZW1 134 aa6.54□□□□□ -1.36
SDS3YIL084C UFD4P33202 1483 aa6.53□□□□□ -1.36
SDS3YIL084C SUV3P32580 737 aa6.53□□□□□ -1.36
SDS3YIL084C OMA1P36163 345 aa6.53□□□□□ -1.36
SDS3YIL084C ALG14P38242 237 aa6.53□□□□□ -1.36
SDS3YIL084C PRK1P40494 810 aa6.53□□□□□ -1.36
SDS3YIL084C ESP1Q03018 1630 aa6.52□□□□□ -1.37
SDS3YIL084C GAS5Q08193 484 aa6.52□□□□□ -1.37
SDS3YIL084C NOP8Q08287 484 aaPredicted RBP6.52□□□□□ -1.37
SDS3YIL084C NHA1Q99271 985 aa6.52□□□□□ -1.37
SDS3YIL084C SCD5P34758 872 aa6.51□□□□□ -1.37
SDS3YIL084C FOX2Q02207 900 aaKnown RBP6.51□□□□□ -1.37
SDS3YIL084C YBL113CQ7M4S9 792 aa6.51□□□□□ -1.37
SDS3YIL084C SIN3P22579 1536 aa6.5□□□□□ -1.37
SDS3YIL084C YTA6P40328 754 aa6.5□□□□□ -1.37
SDS3YIL084C BNI1P41832 1953 aa6.49□□□□□ -1.37
SDS3YIL084C MYO2P19524 1574 aaKnown RBP6.49□□□□□ -1.37
SDS3YIL084C DNF1P32660 1571 aa6.49□□□□□ -1.37
SDS3YIL084C NAR1P23503 491 aaKnown RBP6.49□□□□□ -1.37
SDS3YIL084C YBR197CP38306 217 aa6.49□□□□□ -1.37
SDS3YIL084C BOL3P39724 118 aa6.49□□□□□ -1.37
SDS3YIL084C CAB1Q04430 367 aa6.49□□□□□ -1.37
SDS3YIL084C RPA190P10964 1664 aaKnown RBP6.49□□□□□ -1.37
SDS3YIL084C CDC25P04821 1589 aa6.48□□□□□ -1.37
SDS3YIL084C ISC10P32645 267 aa6.48□□□□□ -1.37
SDS3YIL084C ERP5P38819 212 aa6.48□□□□□ -1.37
SDS3YIL084C STM1P39015 273 aaKnown RBP6.48□□□□□ -1.37
SDS3YIL084C ATG1P53104 897 aa6.48□□□□□ -1.37
SDS3YIL084C GRS1P38088 690 aaKnown RBP6.47□□□□□ -1.37
SDS3YIL084C GLO3P38682 493 aaKnown RBP6.47□□□□□ -1.37
SDS3YIL084C HXT5P38695 592 aa6.47□□□□□ -1.37
SDS3YIL084C MTO1P53070 669 aa6.47□□□□□ -1.37
SDS3YIL084C UTP4Q06679 776 aaKnown RBP6.47□□□□□ -1.37
SDS3YIL084C LSO1Q3E827 93 aa6.47□□□□□ -1.37
SDS3YIL084C GIS4Q04233 774 aa6.46□□□□□ -1.38
SDS3YIL084C TY2B-LR1P0C2J3 1770 aa6.46□□□□□ -1.38
SDS3YIL084C TY2B-FP0CX63 1770 aa6.46□□□□□ -1.38
SDS3YIL084C TY2B-GR2P0CX64 1770 aa6.46□□□□□ -1.38
SDS3YIL084C TY2B-CP25384 1770 aa6.46□□□□□ -1.38
SDS3YIL084C TY2B-DR2Q03494 1770 aa6.46□□□□□ -1.38
SDS3YIL084C TY1B-DR1Q03855 1755 aa6.46□□□□□ -1.38
SDS3YIL084C TY2B-DR3Q07791 1770 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms