RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W NTE1Q04958 1679 aa3.41□□□□□ -1.86
BRP1YGL007W AHP1P38013 176 aaKnown RBP3.41□□□□□ -1.86
BRP1YGL007W FPS1P23900 669 aa3.4□□□□□ -1.87
BRP1YGL007W GLC3P32775 704 aa3.4□□□□□ -1.87
BRP1YGL007W MET1P36150 593 aa3.4□□□□□ -1.87
BRP1YGL007W TAT1P38085 619 aa3.4□□□□□ -1.87
BRP1YGL007W CSN12P47130 423 aa3.4□□□□□ -1.87
BRP1YGL007W WTM2Q12206 467 aa3.4□□□□□ -1.87
BRP1YGL007W RAD59Q12223 238 aa3.4□□□□□ -1.87
BRP1YGL007W NUP157P40064 1391 aaKnown RBP3.38□□□□□ -1.87
BRP1YGL007W DAT1P13483 248 aaKnown RBP3.38□□□□□ -1.87
BRP1YGL007W YNR021WP53723 404 aaKnown RBP3.38□□□□□ -1.87
BRP1YGL007W STE20Q03497 939 aaKnown RBP3.38□□□□□ -1.87
BRP1YGL007W NUP170P38181 1502 aa3.38□□□□□ -1.87
BRP1YGL007W SPO14P36126 1683 aa3.37□□□□□ -1.87
BRP1YGL007W IQG1Q12280 1495 aa3.37□□□□□ -1.87
BRP1YGL007W IRC24P40580 263 aa3.37□□□□□ -1.87
BRP1YGL007W FRA1Q07825 749 aa3.37□□□□□ -1.87
BRP1YGL007W IRC20Q06554 1556 aa3.37□□□□□ -1.87
BRP1YGL007W GDB1Q06625 1536 aa3.36□□□□□ -1.87
BRP1YGL007W UTP7P40055 554 aaKnown RBP3.36□□□□□ -1.87
BRP1YGL007W NAF1P53919 492 aaKnown RBP3.36□□□□□ -1.87
BRP1YGL007W ALO1P54783 526 aaKnown RBP3.36□□□□□ -1.87
BRP1YGL007W ULS1Q08562 1619 aa3.36□□□□□ -1.87
BRP1YGL007W DNF2Q12675 1612 aa3.35□□□□□ -1.87
BRP1YGL007W MAK16P10962 306 aaPredicted RBP3.35□□□□□ -1.87
BRP1YGL007W PDC5P16467 563 aaKnown RBP3.35□□□□□ -1.87
BRP1YGL007W KNS1P32350 737 aaPredicted RBP3.35□□□□□ -1.87
BRP1YGL007W UTR2P32623 467 aa3.35□□□□□ -1.87
BRP1YGL007W MRPL16P38064 232 aa3.35□□□□□ -1.87
BRP1YGL007W ALA1P40825 983 aaKnown RBP3.35□□□□□ -1.87
BRP1YGL007W PRY1P47032 299 aa3.35□□□□□ -1.87
BRP1YGL007W YPL034WQ03083 165 aa3.35□□□□□ -1.87
BRP1YGL007W TRM3Q07527 1436 aa3.35□□□□□ -1.87
BRP1YGL007W PDR10P51533 1564 aa3.34□□□□□ -1.87
BRP1YGL007W SPT2P06843 333 aaPredicted RBP3.34□□□□□ -1.87
BRP1YGL007W IRE1P32361 1115 aa3.34□□□□□ -1.87
BRP1YGL007W RPN1P38764 993 aaKnown RBP3.34□□□□□ -1.87
BRP1YGL007W ISR1Q06098 443 aaKnown RBP3.34□□□□□ -1.87
BRP1YGL007W PDR15Q04182 1529 aaKnown RBP3.34□□□□□ -1.88
BRP1YGL007W OMA1P36163 345 aa3.33□□□□□ -1.88
BRP1YGL007W TBS1P38114 1094 aa3.33□□□□□ -1.88
BRP1YGL007W SUM1P46676 1062 aa3.33□□□□□ -1.88
BRP1YGL007W JJJ2P46997 583 aa3.33□□□□□ -1.88
BRP1YGL007W YSP2Q06681 1438 aa3.33□□□□□ -1.88
BRP1YGL007W BUD3P25558 1636 aa3.33□□□□□ -1.88
BRP1YGL007W INP52P50942 1183 aa3.32□□□□□ -1.88
BRP1YGL007W CAT8P39113 1433 aa3.32□□□□□ -1.88
BRP1YGL007W GEA1P47102 1408 aaPredicted RBP3.32□□□□□ -1.88
BRP1YGL007W ARO1P08566 1588 aaKnown RBP3.32□□□□□ -1.88
BRP1YGL007W MLP2P40457 1679 aa3.32□□□□□ -1.88
BRP1YGL007W SHM1P37292 490 aaPredicted RBP3.31□□□□□ -1.88
BRP1YGL007W YAP3P38749 330 aa3.31□□□□□ -1.88
BRP1YGL007W TY1A-DR2Q03964 440 aaKnown RBP3.31□□□□□ -1.88
BRP1YGL007W AIM7Q12156 149 aa3.31□□□□□ -1.88
BRP1YGL007W STB3Q12427 513 aa3.31□□□□□ -1.88
BRP1YGL007W TY3B-GQ99315 1547 aa3.3□□□□□ -1.88
BRP1YGL007W PDC6P26263 563 aaKnown RBP3.3□□□□□ -1.88
BRP1YGL007W SPR3P41901 512 aa3.3□□□□□ -1.88
BRP1YGL007W MRX12P47084 519 aa3.3□□□□□ -1.88
BRP1YGL007W PSH1Q12161 406 aa3.3□□□□□ -1.88
BRP1YGL007W SEC7P11075 2009 aaKnown RBP3.3□□□□□ -1.88
BRP1YGL007W DOP1Q03921 1698 aa3.3□□□□□ -1.88
BRP1YGL007W EMP47P43555 445 aa3.29□□□□□ -1.88
BRP1YGL007W APL6P46682 809 aa3.29□□□□□ -1.88
BRP1YGL007W BNR1P40450 1375 aa3.28□□□□□ -1.88
BRP1YGL007W ISF1P32488 338 aa3.28□□□□□ -1.88
BRP1YGL007W TPS3P38426 1054 aaKnown RBP3.28□□□□□ -1.88
BRP1YGL007W HAL5P38970 855 aaKnown RBP3.28□□□□□ -1.88
BRP1YGL007W SLX8P40072 274 aa3.27□□□□□ -1.89
BRP1YGL007W AVT1P47082 602 aa3.27□□□□□ -1.89
BRP1YGL007W YOR093CQ12275 1648 aa3.26□□□□□ -1.89
BRP1YGL007W SSA2P10592 639 aaKnown RBP3.26□□□□□ -1.89
BRP1YGL007W BUD9P53226 547 aa3.26□□□□□ -1.89
BRP1YGL007W MAK10Q02197 733 aa3.26□□□□□ -1.89
BRP1YGL007W URN1Q06525 465 aaKnown RBP3.26□□□□□ -1.89
BRP1YGL007W RPS31P05759 152 aaKnown RBP3.25□□□□□ -1.89
BRP1YGL007W MSC7P38694 644 aa3.25□□□□□ -1.89
BRP1YGL007W HDA3Q06623 655 aa3.25□□□□□ -1.89
BRP1YGL007W MCM16Q12262 181 aa3.25□□□□□ -1.89
BRP1YGL007W NHA1Q99271 985 aa3.25□□□□□ -1.89
BRP1YGL007W RPP1AP05318 106 aaPredicted RBP3.24□□□□□ -1.89
BRP1YGL007W IPL1P38991 367 aa3.24□□□□□ -1.89
BRP1YGL007W RLF2Q12495 606 aa3.24□□□□□ -1.89
BRP1YGL007W SRB8P25648 1427 aa3.24□□□□□ -1.89
BRP1YGL007W CHC1P22137 1653 aaKnown RBP3.24□□□□□ -1.89
BRP1YGL007W YBT1P32386 1661 aa3.24□□□□□ -1.89
BRP1YGL007W LEU1P07264 779 aaKnown RBP3.23□□□□□ -1.89
BRP1YGL007W TYS1P36421 394 aaKnown RBP3.23□□□□□ -1.89
BRP1YGL007W PGM2P37012 569 aaKnown RBP3.23□□□□□ -1.89
BRP1YGL007W ALG14P38242 237 aa3.23□□□□□ -1.89
BRP1YGL007W CSE4P36012 229 aa3.22□□□□□ -1.89
BRP1YGL007W SOH1P38633 127 aa3.22□□□□□ -1.89
BRP1YGL007W BUD21Q08492 214 aaPredicted RBP3.22□□□□□ -1.89
BRP1YGL007W DNF3Q12674 1656 aa3.22□□□□□ -1.89
BRP1YGL007W AI3P03877 415 aa3.21□□□□□ -1.9
BRP1YGL007W KIN1P13185 1064 aa3.21□□□□□ -1.9
BRP1YGL007W RGP1P16664 663 aa3.21□□□□□ -1.9
BRP1YGL007W ALD2P47771 506 aa3.21□□□□□ -1.9
BRP1YGL007W HPC2Q01448 625 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 54.8 ms