RNA–Protein interactions for RNA: YER057C

HMF1, Transcript of Member of the p14.5 protein family, yeast

Gene HMF1, Length 390 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMF1	YER057C	RIM21	P48565	533 aa		4.63	□□□□□ -1.67
HMF1	YER057C	UBP15	P50101	1230 aa		4.63	□□□□□ -1.67
HMF1	YER057C	YNL108C	P53929	270 aa		4.63	□□□□□ -1.67
HMF1	YER057C	YPR204W	Q08995	1032 aa		4.63	□□□□□ -1.67
HMF1	YER057C	TY1A-DR3	Q12441	440 aa		4.63	□□□□□ -1.67
HMF1	YER057C	NUP170	P38181	1502 aa		4.62	□□□□□ -1.67
HMF1	YER057C	PDR15	Q04182	1529 aa	Known RBP	4.62	□□□□□ -1.67
HMF1	YER057C	IRC20	Q06554	1556 aa		4.62	□□□□□ -1.67
HMF1	YER057C	CUZ1	P53899	274 aa		4.62	□□□□□ -1.67
HMF1	YER057C	DNF2	Q12675	1612 aa		4.61	□□□□□ -1.67
HMF1	YER057C	DOP1	Q03921	1698 aa		4.61	□□□□□ -1.67
HMF1	YER057C	RDS2	P19541	446 aa	Known RBP	4.61	□□□□□ -1.67
HMF1	YER057C	TBS1	P38114	1094 aa		4.61	□□□□□ -1.67
HMF1	YER057C	HDA3	Q06623	655 aa		4.61	□□□□□ -1.67
HMF1	YER057C	GDB1	Q06625	1536 aa		4.61	□□□□□ -1.67
HMF1	YER057C	SEC7	P11075	2009 aa	Known RBP	4.6	□□□□□ -1.67
HMF1	YER057C	UTP7	P40055	554 aa	Known RBP	4.6	□□□□□ -1.67
HMF1	YER057C	SUM1	P46676	1062 aa		4.6	□□□□□ -1.67
HMF1	YER057C	YJL007C	P47080	104 aa		4.6	□□□□□ -1.67
HMF1	YER057C	MTC5	Q03897	1148 aa		4.6	□□□□□ -1.67
HMF1	YER057C	NUP157	P40064	1391 aa	Known RBP	4.59	□□□□□ -1.67
HMF1	YER057C	MRX10	Q05648	414 aa		4.59	□□□□□ -1.67
HMF1	YER057C	DIT1	P21623	536 aa		4.58	□□□□□ -1.68
HMF1	YER057C	AHP1	P38013	176 aa	Known RBP	4.58	□□□□□ -1.68
HMF1	YER057C	CEM1	P39525	442 aa		4.58	□□□□□ -1.68
HMF1	YER057C	PDR10	P51533	1564 aa		4.57	□□□□□ -1.68
HMF1	YER057C	IQG1	Q12280	1495 aa		4.57	□□□□□ -1.68
HMF1	YER057C	SHM1	P37292	490 aa	Predicted RBP	4.57	□□□□□ -1.68
HMF1	YER057C	BIM1	P40013	344 aa		4.57	□□□□□ -1.68
HMF1	YER057C	ICP55	P40051	511 aa		4.57	□□□□□ -1.68
HMF1	YER057C	JJJ2	P46997	583 aa		4.57	□□□□□ -1.68
HMF1	YER057C	YMR265C	Q03508	461 aa	Known RBP	4.57	□□□□□ -1.68
HMF1	YER057C	YPQ2	Q06328	317 aa		4.57	□□□□□ -1.68
HMF1	YER057C	SYT1	Q06836	1226 aa		4.57	□□□□□ -1.68
HMF1	YER057C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
HMF1	YER057C	YDR461C-A	Q2V2P7	80 aa		4.57	□□□□□ -1.68
HMF1	YER057C	ATG32	P40458	529 aa		4.56	□□□□□ -1.68
HMF1	YER057C	PHM7	Q12252	991 aa		4.56	□□□□□ -1.68
HMF1	YER057C	YBT1	P32386	1661 aa		4.56	□□□□□ -1.68
HMF1	YER057C	TY3B-G	Q99315	1547 aa		4.56	□□□□□ -1.68
HMF1	YER057C	BUD3	P25558	1636 aa		4.55	□□□□□ -1.68
HMF1	YER057C	ENO1	P00924	437 aa	Known RBP	4.55	□□□□□ -1.68
HMF1	YER057C	SWI5	P08153	709 aa		4.55	□□□□□ -1.68
HMF1	YER057C	IRE1	P32361	1115 aa		4.55	□□□□□ -1.68
HMF1	YER057C	YFL066C	P43538	392 aa		4.55	□□□□□ -1.68
HMF1	YER057C	TAF7	Q05021	590 aa		4.55	□□□□□ -1.68
HMF1	YER057C	ARO1	P08566	1588 aa	Known RBP	4.55	□□□□□ -1.68
HMF1	YER057C	TIF1	P10081	395 aa	Known RBP	4.54	□□□□□ -1.68
HMF1	YER057C	PEP12	P32854	288 aa		4.54	□□□□□ -1.68
HMF1	YER057C	MDJ1	P35191	511 aa		4.54	□□□□□ -1.68
HMF1	YER057C	AIM9	P40053	627 aa	Known RBP	4.54	□□□□□ -1.68
HMF1	YER057C	ALA1	P40825	983 aa	Known RBP	4.54	□□□□□ -1.68
HMF1	YER057C	KRE33	P53914	1056 aa	Known RBP	4.54	□□□□□ -1.68
HMF1	YER057C	GEA1	P47102	1408 aa	Predicted RBP	4.54	□□□□□ -1.68
HMF1	YER057C	AI1	P03875	834 aa		4.53	□□□□□ -1.68
HMF1	YER057C	RPS31	P05759	152 aa	Known RBP	4.53	□□□□□ -1.68
HMF1	YER057C	PDC6	P26263	563 aa	Known RBP	4.53	□□□□□ -1.68
HMF1	YER057C	YFL034W	P43564	1073 aa		4.53	□□□□□ -1.68
HMF1	YER057C	HGH1	P48362	394 aa	Known RBP	4.53	□□□□□ -1.68
HMF1	YER057C	PSH1	Q12161	406 aa		4.53	□□□□□ -1.68
HMF1	YER057C	PUS1	Q12211	544 aa	Known RBP	4.53	□□□□□ -1.68
HMF1	YER057C	CHC1	P22137	1653 aa	Known RBP	4.52	□□□□□ -1.69
HMF1	YER057C	RPS6A	P0CX37	236 aa	Known RBP	4.52	□□□□□ -1.69
HMF1	YER057C	RPS6B	P0CX38	236 aa	Predicted RBP	4.52	□□□□□ -1.69
HMF1	YER057C	MCM1	P11746	286 aa		4.52	□□□□□ -1.69
HMF1	YER057C	ADE12	P80210	433 aa	Known RBP	4.52	□□□□□ -1.69
HMF1	YER057C	TRM3	Q07527	1436 aa		4.52	□□□□□ -1.69
HMF1	YER057C	RTG2	P32608	588 aa	Known RBP	4.51	□□□□□ -1.69
HMF1	YER057C	LEO1	P38439	464 aa		4.51	□□□□□ -1.69
HMF1	YER057C	NSG2	P53898	299 aa		4.51	□□□□□ -1.69
HMF1	YER057C	CAT8	P39113	1433 aa		4.51	□□□□□ -1.69
HMF1	YER057C	YSP2	Q06681	1438 aa		4.5	□□□□□ -1.69
HMF1	YER057C	LEU1	P07264	779 aa	Known RBP	4.5	□□□□□ -1.69
HMF1	YER057C	NTH2	P35172	780 aa		4.5	□□□□□ -1.69
HMF1	YER057C	YOR093C	Q12275	1648 aa		4.5	□□□□□ -1.69
HMF1	YER057C	RPL34B	P40525	121 aa	Known RBP	4.49	□□□□□ -1.69
HMF1	YER057C	YNL165W	P53891	406 aa		4.49	□□□□□ -1.69
HMF1	YER057C	THI72	Q08579	599 aa		4.49	□□□□□ -1.69
HMF1	YER057C	TSC13	Q99190	310 aa		4.49	□□□□□ -1.69
HMF1	YER057C	PDI1	P17967	522 aa	Known RBP	4.48	□□□□□ -1.69
HMF1	YER057C	MRPL16	P38064	232 aa		4.48	□□□□□ -1.69
HMF1	YER057C	LSB3	P43603	459 aa	Known RBP	4.48	□□□□□ -1.69
HMF1	YER057C	ALD2	P47771	506 aa		4.48	□□□□□ -1.69
HMF1	YER057C	GPM1	P00950	247 aa	Known RBP	4.47	□□□□□ -1.69
HMF1	YER057C	FPS1	P23900	669 aa		4.47	□□□□□ -1.69
HMF1	YER057C	SPR3	P41901	512 aa		4.47	□□□□□ -1.69
HMF1	YER057C	STB3	Q12427	513 aa		4.47	□□□□□ -1.69
HMF1	YER057C	BNR1	P40450	1375 aa		4.46	□□□□□ -1.7
HMF1	YER057C	UBP1	P25037	809 aa		4.46	□□□□□ -1.7
HMF1	YER057C	SBE2	P42223	864 aa	Known RBP	4.46	□□□□□ -1.7
HMF1	YER057C	ACS2	P52910	683 aa	Known RBP	4.46	□□□□□ -1.7
HMF1	YER057C	DNF3	Q12674	1656 aa		4.45	□□□□□ -1.7
HMF1	YER057C	CYT1	P07143	309 aa		4.45	□□□□□ -1.7
HMF1	YER057C	PHO87	P25360	923 aa		4.45	□□□□□ -1.7
HMF1	YER057C	SIS2	P36024	562 aa		4.45	□□□□□ -1.7
HMF1	YER057C	CCT8	P47079	568 aa	Known RBP	4.45	□□□□□ -1.7
HMF1	YER057C	TY1A-DR2	Q03964	440 aa	Known RBP	4.45	□□□□□ -1.7
HMF1	YER057C	RGP1	P16664	663 aa		4.44	□□□□□ -1.7
HMF1	YER057C	MLF3	P32047	452 aa		4.44	□□□□□ -1.7
HMF1	YER057C	MSC7	P38694	644 aa		4.44	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms