RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C SIS1P25294 352 aaKnown RBP7.32□□□□□ -1.24
VPS61YDR136C AIM9P40053 627 aaKnown RBP7.32□□□□□ -1.24
VPS61YDR136C RSM25P40496 264 aa7.32□□□□□ -1.24
VPS61YDR136C CST6P40535 587 aa7.32□□□□□ -1.24
VPS61YDR136C XKS1P42826 600 aa7.32□□□□□ -1.24
VPS61YDR136C THI12P42883 340 aa7.32□□□□□ -1.24
VPS61YDR136C THI5P43534 340 aa7.32□□□□□ -1.24
VPS61YDR136C THI11P47183 340 aa7.32□□□□□ -1.24
VPS61YDR136C THI13Q07748 340 aa7.32□□□□□ -1.24
VPS61YDR136C PDR18P53756 1333 aa7.31□□□□□ -1.24
VPS61YDR136C UTP10P42945 1769 aaKnown RBP7.31□□□□□ -1.24
VPS61YDR136C NUP133P36161 1157 aa7.31□□□□□ -1.24
VPS61YDR136C AAP1P37898 856 aaKnown RBP7.31□□□□□ -1.24
VPS61YDR136C PCS60P38137 543 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
VPS61YDR136C LEO1P38439 464 aa7.31□□□□□ -1.24
VPS61YDR136C YJR008WP47085 338 aa7.31□□□□□ -1.24
VPS61YDR136C YGL081WP53156 320 aa7.31□□□□□ -1.24
VPS61YDR136C DNM1P54861 757 aa7.31□□□□□ -1.24
VPS61YDR136C PEX19Q07418 342 aa7.31□□□□□ -1.24
VPS61YDR136C ALE1Q08548 619 aa7.31□□□□□ -1.24
VPS61YDR136C RIM20Q12033 661 aa7.31□□□□□ -1.24
VPS61YDR136C NCR1Q12200 1170 aa7.31□□□□□ -1.24
VPS61YDR136C NCB2Q92317 146 aa7.31□□□□□ -1.24
VPS61YDR136C MCM2P29469 868 aa7.3□□□□□ -1.24
VPS61YDR136C SSF1P38789 453 aaPredicted RBP7.3□□□□□ -1.24
VPS61YDR136C IES2P40154 320 aa7.3□□□□□ -1.24
VPS61YDR136C BRE1Q07457 700 aaKnown RBP7.3□□□□□ -1.24
VPS61YDR136C NOP58Q12499 511 aaKnown RBP7.3□□□□□ -1.24
VPS61YDR136C PRP45P28004 379 aaPredicted RBP7.29□□□□□ -1.24
VPS61YDR136C KRI1P42846 591 aaKnown RBP7.29□□□□□ -1.24
VPS61YDR136C CWH41P53008 833 aa7.29□□□□□ -1.24
VPS61YDR136C FPR4Q06205 392 aaPredicted RBP7.29□□□□□ -1.24
VPS61YDR136C RIM15P43565 1770 aa7.28□□□□□ -1.24
VPS61YDR136C RPL19AP0CX82 189 aaKnown RBP7.28□□□□□ -1.24
VPS61YDR136C RPL19BP0CX83 189 aaPredicted RBP7.28□□□□□ -1.24
VPS61YDR136C RPP1BP10622 106 aaKnown RBP7.28□□□□□ -1.24
VPS61YDR136C ELM1P32801 640 aa7.28□□□□□ -1.24
VPS61YDR136C MIC60P36112 540 aa7.28□□□□□ -1.24
VPS61YDR136C MLC1P53141 149 aa7.28□□□□□ -1.24
VPS61YDR136C MRPS35P53292 345 aa7.28□□□□□ -1.24
VPS61YDR136C MDG1P53885 366 aa7.28□□□□□ -1.24
VPS61YDR136C ZDS2P54786 942 aa7.28□□□□□ -1.24
VPS61YDR136C APC11Q12157 165 aa7.28□□□□□ -1.24
VPS61YDR136C TCB1Q12466 1186 aa7.28□□□□□ -1.24
VPS61YDR136C MPE1P35728 441 aaKnown RBP7.27□□□□□ -1.25
VPS61YDR136C SLI15P38283 698 aa7.27□□□□□ -1.25
VPS61YDR136C UBP12P39538 1254 aa7.27□□□□□ -1.25
VPS61YDR136C SPO22P40511 975 aa7.27□□□□□ -1.25
VPS61YDR136C PML39Q03760 334 aa7.27□□□□□ -1.25
VPS61YDR136C ESC2Q06340 456 aa7.27□□□□□ -1.25
VPS61YDR136C TAF13P11747 167 aa7.26□□□□□ -1.25
VPS61YDR136C PRX1P34227 261 aaKnown RBP7.26□□□□□ -1.25
VPS61YDR136C DID4P36108 232 aa7.26□□□□□ -1.25
VPS61YDR136C MRPL10P36520 322 aa7.26□□□□□ -1.25
VPS61YDR136C PEX14P53112 341 aa7.26□□□□□ -1.25
VPS61YDR136C MEC3Q02574 474 aa7.26□□□□□ -1.25
VPS61YDR136C RMD1Q03441 430 aa7.26□□□□□ -1.25
VPS61YDR136C YDL129WQ07555 291 aa7.26□□□□□ -1.25
VPS61YDR136C LPD1P09624 499 aaKnown RBP7.25□□□□□ -1.25
VPS61YDR136C TTI1P36097 1038 aa7.25□□□□□ -1.25
VPS61YDR136C KTR3P38130 404 aaPredicted RBP7.25□□□□□ -1.25
VPS61YDR136C NPR3P38742 1146 aa7.25□□□□□ -1.25
VPS61YDR136C RPN1P38764 993 aaKnown RBP7.25□□□□□ -1.25
VPS61YDR136C CCT5P40413 562 aaKnown RBP7.25□□□□□ -1.25
VPS61YDR136C YGL242CP53066 181 aa7.25□□□□□ -1.25
VPS61YDR136C ETT1Q08421 412 aaKnown RBP7.25□□□□□ -1.25
VPS61YDR136C AIR2Q12476 344 aaKnown RBP7.25□□□□□ -1.25
VPS61YDR136C TPM1P17536 199 aaKnown RBP7.24□□□□□ -1.25
VPS61YDR136C STU2P46675 888 aa7.24□□□□□ -1.25
VPS61YDR136C YNR021WP53723 404 aaKnown RBP7.24□□□□□ -1.25
VPS61YDR136C RMT2Q03305 412 aa7.24□□□□□ -1.25
VPS61YDR136C QCR6P00127 147 aa7.23□□□□□ -1.25
VPS61YDR136C FRS2P15625 503 aaKnown RBP7.23□□□□□ -1.25
VPS61YDR136C MBR1P23493 339 aa7.23□□□□□ -1.25
VPS61YDR136C PBY1P38254 753 aa7.23□□□□□ -1.25
VPS61YDR136C NUP42P49686 430 aaKnown RBP7.23□□□□□ -1.25
VPS61YDR136C CTF18P49956 741 aa7.23□□□□□ -1.25
VPS61YDR136C ADE16P54113 591 aaKnown RBP7.23□□□□□ -1.25
VPS61YDR136C ALO1P54783 526 aaKnown RBP7.23□□□□□ -1.25
VPS61YDR136C CPA2P03965 1118 aaKnown RBP7.22□□□□□ -1.25
VPS61YDR136C CYC8P14922 966 aa7.22□□□□□ -1.25
VPS61YDR136C OSM1P21375 501 aaKnown RBP7.22□□□□□ -1.25
VPS61YDR136C KTR1P27810 393 aaKnown RBP7.22□□□□□ -1.25
VPS61YDR136C TPM2P40414 161 aa7.22□□□□□ -1.25
VPS61YDR136C PEX29Q03370 554 aa7.22□□□□□ -1.25
VPS61YDR136C YPL150WQ12152 901 aa7.22□□□□□ -1.25
VPS61YDR136C FAS2P19097 1887 aaKnown RBP7.21□□□□□ -1.25
VPS61YDR136C ATE1P16639 503 aa7.21□□□□□ -1.26
VPS61YDR136C YJL171CP46992 396 aa7.21□□□□□ -1.26
VPS61YDR136C HOS3Q02959 697 aaKnown RBP7.21□□□□□ -1.26
VPS61YDR136C VPS64Q03944 604 aa7.21□□□□□ -1.26
VPS61YDR136C PSK2Q08217 1101 aa7.21□□□□□ -1.26
VPS61YDR136C ELG1Q12050 791 aa7.21□□□□□ -1.26
VPS61YDR136C PSE1P32337 1089 aaKnown RBP7.2□□□□□ -1.26
VPS61YDR136C OSH3P38713 996 aaKnown RBP7.2□□□□□ -1.26
VPS61YDR136C ORC6P38826 435 aa7.2□□□□□ -1.26
VPS61YDR136C STM1P39015 273 aaKnown RBP7.2□□□□□ -1.26
VPS61YDR136C MID1P41821 548 aa7.2□□□□□ -1.26
VPS61YDR136C SSL2Q00578 843 aa7.2□□□□□ -1.26
VPS61YDR136C SSP2Q08646 371 aa7.2□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms