RNA–Protein interactions for RNA: ENST00000642100.1

CASC19-279, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-279ENST00000642100 SPIRE2Q8WWL2 714 aa12.21□□□□□ -0.45
CASC19-279ENST00000642100 GLMNQ92990 594 aa12.21□□□□□ -0.45
CASC19-279ENST00000642100 SPTLC1O15269 473 aa12.2□□□□□ -0.46
CASC19-279ENST00000642100 PNMA3Q9UL41 463 aa12.19□□□□□ -0.46
CASC19-279ENST00000642100 NBPF26B4DH59 902 aa12.18□□□□□ -0.46
CASC19-279ENST00000642100 NUDT18Q6ZVK8 323 aa12.18□□□□□ -0.46
CASC19-279ENST00000642100 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.17□□□□□ -0.46
CASC19-279ENST00000642100 NUTM1Q86Y26 1132 aa12.17□□□□□ -0.46
CASC19-279ENST00000642100 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.17□□□□□ -0.46
CASC19-279ENST00000642100 POM121CA8CG34 1229 aa12.16□□□□□ -0.46
CASC19-279ENST00000642100 PBXIP1Q96AQ6 731 aa12.16□□□□□ -0.46
CASC19-279ENST00000642100 LRCH3Q96II8 777 aa12.16□□□□□ -0.46
CASC19-279ENST00000642100 WBP1LQ9NX94 342 aa12.16□□□□□ -0.46
CASC19-279ENST00000642100 GJA5P36382 358 aa12.15□□□□□ -0.46
CASC19-279ENST00000642100 RSBN1LQ6PCB5 846 aaPredicted RBP12.15□□□□□ -0.46
CASC19-279ENST00000642100 TBC1D2BQ9UPU7 963 aa12.15□□□□□ -0.46
CASC19-279ENST00000642100 AP1G2O75843 785 aa12.14□□□□□ -0.47
CASC19-279ENST00000642100 CD46P15529 392 aa12.14□□□□□ -0.47
CASC19-279ENST00000642100 KCNA1Q09470 495 aa12.14□□□□□ -0.47
CASC19-279ENST00000642100 SAMD7Q7Z3H4 446 aa12.14□□□□□ -0.47
CASC19-279ENST00000642100 SULF1Q8IWU6 871 aa12.14□□□□□ -0.47
CASC19-279ENST00000642100 BRD1O95696 1058 aa12.13□□□□□ -0.47
CASC19-279ENST00000642100 TSR3Q9UJK0 312 aaKnown RBP12.13□□□□□ -0.47
CASC19-279ENST00000642100 USTQ9Y2C2 406 aa12.13□□□□□ -0.47
CASC19-279ENST00000642100 LILRB3O75022 631 aa12.12□□□□□ -0.47
CASC19-279ENST00000642100 CSPP1Q1MSJ5 1256 aa12.12□□□□□ -0.47
CASC19-279ENST00000642100 HPS5Q9UPZ3 1129 aa12.12□□□□□ -0.47
CASC19-279ENST00000642100 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
CASC19-279ENST00000642100 CSB-PGBD3P0DP91 1061 aa12.1□□□□□ -0.47
CASC19-279ENST00000642100 IFFO2Q5TF58 517 aa12.1□□□□□ -0.47
CASC19-279ENST00000642100 EYA1Q99502 592 aa12.1□□□□□ -0.47
CASC19-279ENST00000642100 RCCD1A6NED2 376 aa12.09□□□□□ -0.47
CASC19-279ENST00000642100 MOXD2PA6NHM9 499 aa12.09□□□□□ -0.47
CASC19-279ENST00000642100 WASHC4Q2M389 1173 aa12.09□□□□□ -0.47
CASC19-279ENST00000642100 HDGFL1Q5TGJ6 251 aa12.09□□□□□ -0.47
CASC19-279ENST00000642100 FOXD4L5Q5VV16 416 aaPredicted RBP12.09□□□□□ -0.47
CASC19-279ENST00000642100 FOXD4L4Q8WXT5 416 aaPredicted RBP12.09□□□□□ -0.47
CASC19-279ENST00000642100 NDUFB9Q9Y6M9 179 aa12.09□□□□□ -0.47
CASC19-279ENST00000642100 NUTM2BA6NNL0 878 aaPredicted RBP12.08□□□□□ -0.48
CASC19-279ENST00000642100 NUTM2EB1AL46 878 aaPredicted RBP12.08□□□□□ -0.48
CASC19-279ENST00000642100 USP17L8P0C7I0 530 aa12.08□□□□□ -0.48
CASC19-279ENST00000642100 RBM25P49756 843 aaKnown RBP12.08□□□□□ -0.48
CASC19-279ENST00000642100 QPCTQ16769 361 aa12.08□□□□□ -0.48
CASC19-279ENST00000642100 NUTM2DQ5VT03 806 aaPredicted RBP12.08□□□□□ -0.48
CASC19-279ENST00000642100 NUTM2AQ8IVF1 878 aaPredicted RBP12.08□□□□□ -0.48
CASC19-279ENST00000642100 PPP4CP60510 307 aa12.07□□□□□ -0.48
CASC19-279ENST00000642100 RTL5Q5HYW3 569 aaPredicted RBP12.06□□□□□ -0.48
CASC19-279ENST00000642100 PRPF38BQ5VTL8 546 aaKnown RBP12.06□□□□□ -0.48
CASC19-279ENST00000642100 ITGBL1O95965 494 aaPredicted RBP12.05□□□□□ -0.48
CASC19-279ENST00000642100 RFX1P22670 979 aa12.05□□□□□ -0.48
CASC19-279ENST00000642100 DDX11L8A8MPP1 907 aa12.04□□□□□ -0.48
CASC19-279ENST00000642100 NDUFV2P19404 249 aa12.04□□□□□ -0.48
CASC19-279ENST00000642100 HDGFP51858 240 aaKnown RBP12.04□□□□□ -0.48
CASC19-279ENST00000642100 PCDHB15Q9Y5E8 787 aa12.04□□□□□ -0.48
CASC19-279ENST00000642100 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.03□□□□□ -0.48
CASC19-279ENST00000642100 SWT1Q5T5J6 900 aaKnown RBP12.03□□□□□ -0.48
CASC19-279ENST00000642100 CFAP70Q5T0N1 1121 aa12.02□□□□□ -0.49
CASC19-279ENST00000642100 DNAJB2P25686 324 aa12.01□□□□□ -0.49
CASC19-279ENST00000642100 GJD4Q96KN9 370 aaPredicted RBP12.01□□□□□ -0.49
CASC19-279ENST00000642100 ZBTB3Q9H5J0 574 aa12.01□□□□□ -0.49
CASC19-279ENST00000642100 E9PSI1 815 aa12□□□□□ -0.49
CASC19-279ENST00000642100 SRPK2P78362 688 aaKnown RBP12□□□□□ -0.49
CASC19-279ENST00000642100 ADAMTS19Q8TE59 1207 aa12□□□□□ -0.49
CASC19-279ENST00000642100 PPP1R12CQ9BZL4 782 aa12□□□□□ -0.49
CASC19-279ENST00000642100 CABLES1Q8TDN4 633 aa11.99□□□□□ -0.49
CASC19-279ENST00000642100 ZNF428Q96B54 188 aa11.98□□□□□ -0.49
CASC19-279ENST00000642100 A0A0G2JS52 829 aa11.97□□□□□ -0.49
CASC19-279ENST00000642100 RNF40O75150 1001 aa11.97□□□□□ -0.49
CASC19-279ENST00000642100 USP46P62068 366 aa11.97□□□□□ -0.49
CASC19-279ENST00000642100 KDM4AO75164 1064 aa11.96□□□□□ -0.49
CASC19-279ENST00000642100 SLF2Q8IX21 1173 aa11.96□□□□□ -0.49
CASC19-279ENST00000642100 APLP1P51693 650 aa11.95□□□□□ -0.5
CASC19-279ENST00000642100 KCNC4Q03721 635 aa11.95□□□□□ -0.5
CASC19-279ENST00000642100 CCDC27Q2M243 656 aa11.95□□□□□ -0.5
CASC19-279ENST00000642100 TMEM134Q9H6X4 195 aa11.95□□□□□ -0.5
CASC19-279ENST00000642100 AMOTL2Q9Y2J4 779 aa11.95□□□□□ -0.5
CASC19-279ENST00000642100 PALM3A6NDB9 673 aaPredicted RBP11.94□□□□□ -0.5
CASC19-279ENST00000642100 TJAP1Q5JTD0 557 aa11.94□□□□□ -0.5
CASC19-279ENST00000642100 RSPH4AQ5TD94 716 aa11.94□□□□□ -0.5
CASC19-279ENST00000642100 RDH13Q8NBN7 331 aa11.94□□□□□ -0.5
CASC19-279ENST00000642100 LMOD1P29536 600 aaPredicted RBP11.93□□□□□ -0.5
CASC19-279ENST00000642100 VAC14Q08AM6 782 aa11.93□□□□□ -0.5
CASC19-279ENST00000642100 ALG2Q9H553 416 aa11.93□□□□□ -0.5
CASC19-279ENST00000642100 VRTNQ9H8Y1 702 aa11.93□□□□□ -0.5
CASC19-279ENST00000642100 FDX1P10109 184 aa11.92□□□□□ -0.5
CASC19-279ENST00000642100 SOX11P35716 441 aa11.92□□□□□ -0.5
CASC19-279ENST00000642100 IVNS1ABPQ9Y6Y0 642 aa11.92□□□□□ -0.5
CASC19-279ENST00000642100 CTDSPL2Q05D32 466 aa11.91□□□□□ -0.5
CASC19-279ENST00000642100 SND1Q7KZF4 910 aaKnown RBP eCLIP11.91□□□□□ -0.5
CASC19-279ENST00000642100 HELBQ8NG08 1087 aaPredicted RBP11.91□□□□□ -0.5
CASC19-279ENST00000642100 TRIM34Q9BYJ4 488 aa11.91□□□□□ -0.5
CASC19-279ENST00000642100 ATG7O95352 703 aa11.9□□□□□ -0.5
CASC19-279ENST00000642100 SLC4A3P48751 1232 aa11.9□□□□□ -0.5
CASC19-279ENST00000642100 MTRQ99707 1265 aa11.9□□□□□ -0.5
CASC19-279ENST00000642100 HMX1Q9NP08 348 aaPredicted RBP11.9□□□□□ -0.5
CASC19-279ENST00000642100 HOXA2O43364 376 aa11.89□□□□□ -0.51
CASC19-279ENST00000642100 TFIP11Q9UBB9 837 aaKnown RBP11.89□□□□□ -0.51
CASC19-279ENST00000642100 GPR37L1O60883 481 aa11.88□□□□□ -0.51
CASC19-279ENST00000642100 RGS20O76081 388 aa11.88□□□□□ -0.51
CASC19-279ENST00000642100 CARNS1A5YM72 827 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms