RNA–Protein interactions for RNA: ENST00000642100.1

CASC19-279, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-279ENST00000642100 AEBP2Q6ZN18 517 aaPredicted RBP29.94■■■□□ 2.38
CASC19-279ENST00000642100 CHIC1Q5VXU3 224 aa28.76■■■□□ 2.19
CASC19-279ENST00000642100 SENP3Q9H4L4 574 aaPredicted RBP25.42■■□□□ 1.66
CASC19-279ENST00000642100 PHF23Q9BUL5 403 aaPredicted RBP25.29■■□□□ 1.64
CASC19-279ENST00000642100 FOXD1Q16676 465 aa23.68■■□□□ 1.38
CASC19-279ENST00000642100 PLPPR3Q6T4P5 718 aa23.13■■□□□ 1.29
CASC19-279ENST00000642100 PPP6R1Q9UPN7 881 aa22.47■■□□□ 1.19
CASC19-279ENST00000642100 ADRA2BP18089 450 aa22.39■■□□□ 1.17
CASC19-279ENST00000642100 PIAS4Q8N2W9 510 aaPredicted RBP22.19■■□□□ 1.14
CASC19-279ENST00000642100 MSH5O43196 834 aa21.98■■□□□ 1.11
CASC19-279ENST00000642100 POTEDQ86YR6 584 aa20.83■□□□□ 0.93
CASC19-279ENST00000642100 MAPK8IP2Q13387 824 aaPredicted RBP20.46■□□□□ 0.87
CASC19-279ENST00000642100 SCAF1Q9H7N4 1312 aaKnown RBP20.44■□□□□ 0.86
CASC19-279ENST00000642100 PPP4R3CPQ6ZMV5 832 aa20.34■□□□□ 0.85
CASC19-279ENST00000642100 DMRT2Q9Y5R5 561 aa20.24■□□□□ 0.83
CASC19-279ENST00000642100 CNKSR2Q8WXI2 1034 aa19.86■□□□□ 0.77
CASC19-279ENST00000642100 HOXD11P31277 338 aaPredicted RBP19.66■□□□□ 0.74
CASC19-279ENST00000642100 NCBP3Q53F19 620 aaKnown RBP19.65■□□□□ 0.74
CASC19-279ENST00000642100 RNF216Q9NWF9 866 aaPredicted RBP19.6■□□□□ 0.73
CASC19-279ENST00000642100 EHMT2Q96KQ7 1210 aa19.4■□□□□ 0.7
CASC19-279ENST00000642100 NPM3O75607 178 aaKnown RBP19.39■□□□□ 0.69
CASC19-279ENST00000642100 KCNA4P22459 653 aa19.37■□□□□ 0.69
CASC19-279ENST00000642100 DCAF8L1A6NGE4 600 aa19.34■□□□□ 0.69
CASC19-279ENST00000642100 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
CASC19-279ENST00000642100 RNF39Q9H2S5 420 aa18.82■□□□□ 0.6
CASC19-279ENST00000642100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.68■□□□□ 0.58
CASC19-279ENST00000642100 CSRNP3Q8WYN3 585 aa18.65■□□□□ 0.58
CASC19-279ENST00000642100 SLC4A1APQ9BWU0 796 aaKnown RBP18.65■□□□□ 0.58
CASC19-279ENST00000642100 CACNB1Q02641 598 aaPredicted RBP18.62■□□□□ 0.57
CASC19-279ENST00000642100 C1QBPQ07021 282 aaKnown RBP18.55■□□□□ 0.56
CASC19-279ENST00000642100 SLC4A2P04920 1241 aa18.45■□□□□ 0.54
CASC19-279ENST00000642100 U3KPZ7 1027 aaPredicted RBP18.37■□□□□ 0.53
CASC19-279ENST00000642100 SPINK5Q9NQ38 1064 aaPredicted RBP17.99■□□□□ 0.47
CASC19-279ENST00000642100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.93■□□□□ 0.46
CASC19-279ENST00000642100 HNRNPUL2Q1KMD3 747 aaKnown RBP17.93■□□□□ 0.46
CASC19-279ENST00000642100 FOXD4L1Q9NU39 408 aa17.93■□□□□ 0.46
CASC19-279ENST00000642100 CAPN15O75808 1086 aa17.9■□□□□ 0.46
CASC19-279ENST00000642100 MYCNP04198 464 aaPredicted RBP17.9■□□□□ 0.46
CASC19-279ENST00000642100 SAMD1Q6SPF0 538 aaPredicted RBP17.86■□□□□ 0.45
CASC19-279ENST00000642100 ZBTB22O15209 634 aa17.84■□□□□ 0.45
CASC19-279ENST00000642100 APLP2Q06481 763 aa17.83■□□□□ 0.44
CASC19-279ENST00000642100 DSG3P32926 999 aa17.75■□□□□ 0.43
CASC19-279ENST00000642100 TRHP20396 242 aaPredicted RBP17.71■□□□□ 0.43
CASC19-279ENST00000642100 ZNF219Q9P2Y4 722 aaPredicted RBP17.69■□□□□ 0.42
CASC19-279ENST00000642100 SLC24A1O60721 1099 aa17.55■□□□□ 0.4
CASC19-279ENST00000642100 ABCB7O75027 752 aa17.53■□□□□ 0.4
CASC19-279ENST00000642100 ATF5Q9Y2D1 282 aaPredicted RBP17.52■□□□□ 0.4
CASC19-279ENST00000642100 AMER1Q5JTC6 1135 aaPredicted RBP17.38■□□□□ 0.37
CASC19-279ENST00000642100 ATXN8OSP0DMR3 200 aa17.36■□□□□ 0.37
CASC19-279ENST00000642100 POLA2Q14181 598 aa17.35■□□□□ 0.37
CASC19-279ENST00000642100 RTN4Q9NQC3 1192 aaKnown RBP17.31■□□□□ 0.36
CASC19-279ENST00000642100 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
CASC19-279ENST00000642100 RBM42Q9BTD8 480 aaKnown RBP16.88■□□□□ 0.29
CASC19-279ENST00000642100 FKBP8Q14318 412 aa16.81■□□□□ 0.28
CASC19-279ENST00000642100 OSCARQ8IYS5 282 aa16.76■□□□□ 0.27
CASC19-279ENST00000642100 FBLN2P98095 1184 aa16.74■□□□□ 0.27
CASC19-279ENST00000642100 MKRN4PQ13434 485 aaPredicted RBP16.72■□□□□ 0.27
CASC19-279ENST00000642100 AKT1S1Q96B36 256 aa16.6■□□□□ 0.25
CASC19-279ENST00000642100 SPDYE2BA6NHP3 402 aa16.52■□□□□ 0.24
CASC19-279ENST00000642100 SPDYE6P0CI01 402 aa16.52■□□□□ 0.24
CASC19-279ENST00000642100 SPDYE2Q495Y8 402 aa16.52■□□□□ 0.24
CASC19-279ENST00000642100 REM2Q8IYK8 340 aaPredicted RBP16.46■□□□□ 0.23
CASC19-279ENST00000642100 POTEHQ6S545 545 aa16.39■□□□□ 0.21
CASC19-279ENST00000642100 CHRDL2Q6WN34 429 aa16.39■□□□□ 0.21
CASC19-279ENST00000642100 ZNF692Q9BU19 519 aaPredicted RBP16.38■□□□□ 0.21
CASC19-279ENST00000642100 SSUH2Q9Y2M2 353 aa16.36■□□□□ 0.21
CASC19-279ENST00000642100 PITPNM1O00562 1244 aa16.27■□□□□ 0.2
CASC19-279ENST00000642100 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
CASC19-279ENST00000642100 SPDYE1Q8NFV5 336 aaPredicted RBP16.13■□□□□ 0.17
CASC19-279ENST00000642100 SPDYE4A6NLX3 237 aa16.09■□□□□ 0.17
CASC19-279ENST00000642100 PIP4P2Q8N4L2 257 aa16.09■□□□□ 0.17
CASC19-279ENST00000642100 FXR2P51116 673 aaKnown RBP eCLIP16.07■□□□□ 0.16
CASC19-279ENST00000642100 CLEC11AQ9Y240 323 aa16.07■□□□□ 0.16
CASC19-279ENST00000642100 PLCB2Q00722 1185 aa15.96■□□□□ 0.15
CASC19-279ENST00000642100 FBXO3Q9UK99 471 aa15.96■□□□□ 0.15
CASC19-279ENST00000642100 PRR29P0C7W0 189 aa15.87■□□□□ 0.13
CASC19-279ENST00000642100 PRKAR2AP13861 404 aaKnown RBP15.84■□□□□ 0.13
CASC19-279ENST00000642100 PROM2Q8N271 834 aa15.8■□□□□ 0.12
CASC19-279ENST00000642100 STAG3Q9UJ98 1225 aa15.78■□□□□ 0.12
CASC19-279ENST00000642100 HAP1P54257 671 aaPredicted RBP15.75■□□□□ 0.11
CASC19-279ENST00000642100 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
CASC19-279ENST00000642100 BCANQ96GW7 911 aa15.68■□□□□ 0.1
CASC19-279ENST00000642100 HAX1O00165 279 aa15.67■□□□□ 0.1
CASC19-279ENST00000642100 VASPP50552 380 aaPredicted RBP15.65■□□□□ 0.1
CASC19-279ENST00000642100 DCAF8L2P0C7V8 631 aa15.63■□□□□ 0.09
CASC19-279ENST00000642100 CREBZFQ9NS37 354 aa15.6■□□□□ 0.09
CASC19-279ENST00000642100 EVX2Q03828 476 aa15.57■□□□□ 0.08
CASC19-279ENST00000642100 VSIG10Q8N0Z9 540 aa15.57■□□□□ 0.08
CASC19-279ENST00000642100 FARP1Q9Y4F1 1045 aaPredicted RBP15.56■□□□□ 0.08
CASC19-279ENST00000642100 C19orf67A6NJJ6 358 aa15.54■□□□□ 0.08
CASC19-279ENST00000642100 SP7Q8TDD2 431 aaPredicted RBP15.54■□□□□ 0.08
CASC19-279ENST00000642100 IFNLR1Q8IU57 520 aaPredicted RBP15.51■□□□□ 0.07
CASC19-279ENST00000642100 TAOK2Q9UL54 1235 aa15.47■□□□□ 0.07
CASC19-279ENST00000642100 PRKCSHP14314 528 aaPredicted RBP15.45■□□□□ 0.06
CASC19-279ENST00000642100 PKD2Q13563 968 aa15.43■□□□□ 0.06
CASC19-279ENST00000642100 MNX1P50219 401 aaPredicted RBP15.41■□□□□ 0.06
CASC19-279ENST00000642100 CD44P16070 742 aaKnown RBP15.35■□□□□ 0.05
CASC19-279ENST00000642100 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.35■□□□□ 0.05
CASC19-279ENST00000642100 BBXQ8WY36 941 aaPredicted RBP15.31■□□□□ 0.04
CASC19-279ENST00000642100 MIER1Q8N108 512 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 395.9 ms