RNA–Protein interactions for RNA: ENST00000641179.1

CASC19-216, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,140 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-216ENST00000641179 TTBK1Q5TCY1 1321 aaPredicted RBP12.34□□□□□ -0.43
CASC19-216ENST00000641179 RAPGEF6Q8TEU7 1601 aa12.33□□□□□ -0.43
CASC19-216ENST00000641179 ATP10BO94823 1461 aa12.33□□□□□ -0.44
CASC19-216ENST00000641179 IL21Q9HBE4 155 aa12.32□□□□□ -0.44
CASC19-216ENST00000641179 APLP1P51693 650 aa12.3□□□□□ -0.44
CASC19-216ENST00000641179 PADI6Q6TGC4 694 aa12.3□□□□□ -0.44
CASC19-216ENST00000641179 PCF11O94913 1555 aaKnown RBP12.29□□□□□ -0.44
CASC19-216ENST00000641179 RIMBP3CA6NJZ7 1639 aa12.29□□□□□ -0.44
CASC19-216ENST00000641179 RIMBP3BA6NNM3 1639 aa12.29□□□□□ -0.44
CASC19-216ENST00000641179 RIMBP3Q9UFD9 1639 aa12.29□□□□□ -0.44
CASC19-216ENST00000641179 LRRC9Q6ZRR7 1453 aa12.28□□□□□ -0.44
CASC19-216ENST00000641179 TIAM1Q13009 1591 aa12.28□□□□□ -0.44
CASC19-216ENST00000641179 MTUS2Q5JR59 1369 aa12.28□□□□□ -0.44
CASC19-216ENST00000641179 HDGFP51858 240 aaKnown RBP12.27□□□□□ -0.45
CASC19-216ENST00000641179 LAPTM4AQ15012 233 aa12.27□□□□□ -0.45
CASC19-216ENST00000641179 KANK4Q5T7N3 995 aaPredicted RBP12.27□□□□□ -0.45
CASC19-216ENST00000641179 NECTIN2Q92692 538 aa12.27□□□□□ -0.45
CASC19-216ENST00000641179 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
CASC19-216ENST00000641179 ZNF516Q92618 1163 aa12.26□□□□□ -0.45
CASC19-216ENST00000641179 EYA1Q99502 592 aa12.26□□□□□ -0.45
CASC19-216ENST00000641179 TROQ12816 1431 aaPredicted RBP12.26□□□□□ -0.45
CASC19-216ENST00000641179 SWT1Q5T5J6 900 aaKnown RBP12.25□□□□□ -0.45
CASC19-216ENST00000641179 PPP1R18Q6NYC8 613 aa12.25□□□□□ -0.45
CASC19-216ENST00000641179 Q6ZNB5 142 aa12.25□□□□□ -0.45
CASC19-216ENST00000641179 SLF2Q8IX21 1173 aa12.23□□□□□ -0.45
CASC19-216ENST00000641179 LCE2BO14633 110 aa12.22□□□□□ -0.45
CASC19-216ENST00000641179 RNF40O75150 1001 aa12.22□□□□□ -0.45
CASC19-216ENST00000641179 MLLT3P42568 568 aaPredicted RBP12.22□□□□□ -0.45
CASC19-216ENST00000641179 V9GY48 417 aaPredicted RBP12.22□□□□□ -0.45
CASC19-216ENST00000641179 EHBP1L1Q8N3D4 1523 aa12.21□□□□□ -0.45
CASC19-216ENST00000641179 KCNV2Q8TDN2 545 aa12.21□□□□□ -0.45
CASC19-216ENST00000641179 PRKD2Q9BZL6 878 aa12.21□□□□□ -0.45
CASC19-216ENST00000641179 ADCY10Q96PN6 1610 aa12.21□□□□□ -0.46
CASC19-216ENST00000641179 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.2□□□□□ -0.46
CASC19-216ENST00000641179 CDK13Q14004 1512 aaKnown RBP12.2□□□□□ -0.46
CASC19-216ENST00000641179 ARID3CA6NKF2 412 aa12.19□□□□□ -0.46
CASC19-216ENST00000641179 MAPKBP1O60336 1514 aa12.19□□□□□ -0.46
CASC19-216ENST00000641179 WDR7Q9Y4E6 1490 aa12.19□□□□□ -0.46
CASC19-216ENST00000641179 CFAP43Q8NDM7 1665 aa12.19□□□□□ -0.46
CASC19-216ENST00000641179 ASXL2Q76L83 1435 aa12.19□□□□□ -0.46
CASC19-216ENST00000641179 MIA2Q96PC5 1412 aa12.19□□□□□ -0.46
CASC19-216ENST00000641179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.18□□□□□ -0.46
CASC19-216ENST00000641179 TRIM26Q12899 539 aaPredicted RBP12.18□□□□□ -0.46
CASC19-216ENST00000641179 PTGDRQ13258 359 aa12.18□□□□□ -0.46
CASC19-216ENST00000641179 TSHZ2Q9NRE2 1034 aa12.18□□□□□ -0.46
CASC19-216ENST00000641179 CCNB3Q8WWL7 1395 aa12.17□□□□□ -0.46
CASC19-216ENST00000641179 GFRA3O60609 400 aa12.16□□□□□ -0.46
CASC19-216ENST00000641179 RSPH4AQ5TD94 716 aa12.16□□□□□ -0.46
CASC19-216ENST00000641179 NKX2-3Q8TAU0 364 aa12.16□□□□□ -0.46
CASC19-216ENST00000641179 ZCCHC11Q5TAX3 1644 aaKnown RBP12.15□□□□□ -0.46
CASC19-216ENST00000641179 NCOA2Q15596 1464 aa12.15□□□□□ -0.46
CASC19-216ENST00000641179 MYOM3Q5VTT5 1437 aa12.14□□□□□ -0.47
CASC19-216ENST00000641179 NRG2O14511 850 aaPredicted RBP12.14□□□□□ -0.47
CASC19-216ENST00000641179 EFCAB2Q5VUJ9 269 aa12.14□□□□□ -0.47
CASC19-216ENST00000641179 PRR14Q9BWN1 585 aa12.14□□□□□ -0.47
CASC19-216ENST00000641179 MAGI3Q5TCQ9 1506 aa12.14□□□□□ -0.47
CASC19-216ENST00000641179 PLCH2O75038 1416 aa12.13□□□□□ -0.47
CASC19-216ENST00000641179 ZPR1O75312 459 aa12.13□□□□□ -0.47
CASC19-216ENST00000641179 TMUB1Q9BVT8 246 aa12.13□□□□□ -0.47
CASC19-216ENST00000641179 CFDP1Q9UEE9 299 aaPredicted RBP12.13□□□□□ -0.47
CASC19-216ENST00000641179 PHLDB1Q86UU1 1377 aa12.13□□□□□ -0.47
CASC19-216ENST00000641179 ABCC10Q5T3U5 1492 aa12.13□□□□□ -0.47
CASC19-216ENST00000641179 SUPT6HQ7KZ85 1726 aaKnown RBP12.12□□□□□ -0.47
CASC19-216ENST00000641179 DNAJB2P25686 324 aa12.12□□□□□ -0.47
CASC19-216ENST00000641179 SLC4A3P48751 1232 aa12.12□□□□□ -0.47
CASC19-216ENST00000641179 COPS2P61201 443 aa12.12□□□□□ -0.47
CASC19-216ENST00000641179 PPARGC1BQ86YN6 1023 aaKnown RBP12.12□□□□□ -0.47
CASC19-216ENST00000641179 ADGRG1Q9Y653 693 aa12.12□□□□□ -0.47
CASC19-216ENST00000641179 RRBP1Q9P2E9 1410 aaKnown RBP12.11□□□□□ -0.47
CASC19-216ENST00000641179 ARAP3Q8WWN8 1544 aa12.11□□□□□ -0.47
CASC19-216ENST00000641179 GPATCH8Q9UKJ3 1502 aaKnown RBP12.11□□□□□ -0.47
CASC19-216ENST00000641179 KIF14Q15058 1648 aa12.11□□□□□ -0.47
CASC19-216ENST00000641179 TMEM134Q9H6X4 195 aa12.11□□□□□ -0.47
CASC19-216ENST00000641179 LRRIQ1Q96JM4 1722 aa12.11□□□□□ -0.47
CASC19-216ENST00000641179 GLI2P10070 1586 aa12.1□□□□□ -0.47
CASC19-216ENST00000641179 TRAF7Q6Q0C0 670 aa12.1□□□□□ -0.47
CASC19-216ENST00000641179 GGCXP38435 758 aa12.09□□□□□ -0.47
CASC19-216ENST00000641179 FGD6Q6ZV73 1430 aa12.09□□□□□ -0.47
CASC19-216ENST00000641179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.08□□□□□ -0.48
CASC19-216ENST00000641179 FAM69CQ0P6D2 419 aa12.08□□□□□ -0.48
CASC19-216ENST00000641179 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
CASC19-216ENST00000641179 PCDHB3Q9Y5E6 796 aa12.08□□□□□ -0.48
CASC19-216ENST00000641179 CD109Q6YHK3 1445 aa12.08□□□□□ -0.48
CASC19-216ENST00000641179 ACIN1Q9UKV3 1341 aaKnown RBP12.08□□□□□ -0.48
CASC19-216ENST00000641179 PLEKHH2Q8IVE3 1493 aa12.08□□□□□ -0.48
CASC19-216ENST00000641179 KIAA1107Q9UPP5 1409 aa12.07□□□□□ -0.48
CASC19-216ENST00000641179 BLOC1S3Q6QNY0 202 aa12.06□□□□□ -0.48
CASC19-216ENST00000641179 TCOF1Q13428 1488 aaKnown RBP12.06□□□□□ -0.48
CASC19-216ENST00000641179 ABCA9Q8IUA7 1624 aa12.05□□□□□ -0.48
CASC19-216ENST00000641179 RCCD1A6NED2 376 aa12.04□□□□□ -0.48
CASC19-216ENST00000641179 NEO1Q92859 1461 aa12.03□□□□□ -0.48
CASC19-216ENST00000641179 ACTN4O43707 911 aaKnown RBP12.03□□□□□ -0.48
CASC19-216ENST00000641179 TSPY4P0CV99 314 aa12.03□□□□□ -0.48
CASC19-216ENST00000641179 TSPY10P0CW01 314 aa12.03□□□□□ -0.48
CASC19-216ENST00000641179 EMID1Q96A84 441 aaPredicted RBP12.02□□□□□ -0.49
CASC19-216ENST00000641179 TEX14Q8IWB6 1497 aa12.02□□□□□ -0.49
CASC19-216ENST00000641179 RNF223E7ERA6 249 aa12.01□□□□□ -0.49
CASC19-216ENST00000641179 HRCP23327 699 aa12.01□□□□□ -0.49
CASC19-216ENST00000641179 FAM50AQ14320 339 aaKnown RBP12.01□□□□□ -0.49
CASC19-216ENST00000641179 PDZRN3Q9UPQ7 1066 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms