RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 DCCP43146 1447 aa19.09■□□□□ 0.65
ATRIP-208ENST00000639561 GPRASP1Q5JY77 1395 aa19.09■□□□□ 0.65
ATRIP-208ENST00000639561 NBPF1Q3BBV0 1214 aa19.09■□□□□ 0.65
ATRIP-208ENST00000639561 PHLPP1O60346 1717 aa19.09■□□□□ 0.65
ATRIP-208ENST00000639561 ATF3P18847 181 aa19.08■□□□□ 0.65
ATRIP-208ENST00000639561 ILDR2Q71H61 639 aa19.08■□□□□ 0.65
ATRIP-208ENST00000639561 CCDC184Q52MB2 194 aa19.08■□□□□ 0.64
ATRIP-208ENST00000639561 IFT172Q9UG01 1749 aa19.08■□□□□ 0.64
ATRIP-208ENST00000639561 POLR3GLQ9BT43 218 aa19.07■□□□□ 0.64
ATRIP-208ENST00000639561 LAMC1P11047 1609 aa19.06■□□□□ 0.64
ATRIP-208ENST00000639561 MYT1Q01538 1121 aa19.05■□□□□ 0.64
ATRIP-208ENST00000639561 PHF23Q9BUL5 403 aaPredicted RBP19.05■□□□□ 0.64
ATRIP-208ENST00000639561 PTCH1Q13635 1447 aa19.05■□□□□ 0.64
ATRIP-208ENST00000639561 ADGRL3Q9HAR2 1447 aa19.03■□□□□ 0.64
ATRIP-208ENST00000639561 NALCNQ8IZF0 1738 aa19.03■□□□□ 0.64
ATRIP-208ENST00000639561 AHDC1Q5TGY3 1603 aaPredicted RBP19.02■□□□□ 0.64
ATRIP-208ENST00000639561 COL16A1Q07092 1604 aaPredicted RBP19.01■□□□□ 0.63
ATRIP-208ENST00000639561 SOCS7O14512 581 aa18.99■□□□□ 0.63
ATRIP-208ENST00000639561 SUPT16HQ9Y5B9 1047 aaKnown RBP18.98■□□□□ 0.63
ATRIP-208ENST00000639561 JCADQ9P266 1359 aa18.98■□□□□ 0.63
ATRIP-208ENST00000639561 MST1RQ04912 1400 aa18.98■□□□□ 0.63
ATRIP-208ENST00000639561 HNRNPUQ00839 825 aaKnown RBP eCLIP18.97■□□□□ 0.63
ATRIP-208ENST00000639561 MRS2Q9HD23 443 aa18.97■□□□□ 0.63
ATRIP-208ENST00000639561 ADGRF5Q8IZF2 1346 aa18.96■□□□□ 0.63
ATRIP-208ENST00000639561 ASXL1Q8IXJ9 1541 aa18.96■□□□□ 0.63
ATRIP-208ENST00000639561 ROBO2Q9HCK4 1378 aa18.96■□□□□ 0.63
ATRIP-208ENST00000639561 TESK2Q96S53 571 aa18.96■□□□□ 0.63
ATRIP-208ENST00000639561 KNDC1Q76NI1 1749 aa18.96■□□□□ 0.62
ATRIP-208ENST00000639561 PIK3C2GO75747 1445 aa18.95■□□□□ 0.62
ATRIP-208ENST00000639561 NHSL1Q5SYE7 1610 aa18.95■□□□□ 0.62
ATRIP-208ENST00000639561 SHPRHQ149N8 1683 aa18.94■□□□□ 0.62
ATRIP-208ENST00000639561 MYOM2P54296 1465 aa18.94■□□□□ 0.62
ATRIP-208ENST00000639561 BRINP3Q76B58 766 aa18.94■□□□□ 0.62
ATRIP-208ENST00000639561 CNGB1Q14028 1251 aaPredicted RBP18.93■□□□□ 0.62
ATRIP-208ENST00000639561 TECPR2O15040 1411 aa18.92■□□□□ 0.62
ATRIP-208ENST00000639561 FAM9BQ8IZU0 186 aa18.91■□□□□ 0.62
ATRIP-208ENST00000639561 NRXN1Q9ULB1 1477 aa18.91■□□□□ 0.62
ATRIP-208ENST00000639561 LRPPRCP42704 1394 aaKnown RBP18.91■□□□□ 0.62
ATRIP-208ENST00000639561 STAC3Q96MF2 364 aa18.9■□□□□ 0.62
ATRIP-208ENST00000639561 SPATA31A6Q5VVP1 1343 aa18.9■□□□□ 0.62
ATRIP-208ENST00000639561 CDC42BPGQ6DT37 1551 aa18.9■□□□□ 0.62
ATRIP-208ENST00000639561 C1orf167Q5SNV9 1468 aa18.89■□□□□ 0.61
ATRIP-208ENST00000639561 ABCC11Q96J66 1382 aa18.88■□□□□ 0.61
ATRIP-208ENST00000639561 YTHDC2Q9H6S0 1430 aaKnown RBP18.86■□□□□ 0.61
ATRIP-208ENST00000639561 KIAA1210Q9ULL0 1709 aa18.86■□□□□ 0.61
ATRIP-208ENST00000639561 C14orf93Q9H972 538 aaKnown RBP18.85■□□□□ 0.61
ATRIP-208ENST00000639561 STK26Q9P289 416 aa18.85■□□□□ 0.61
ATRIP-208ENST00000639561 RGS17Q9UGC6 210 aaPredicted RBP18.84■□□□□ 0.61
ATRIP-208ENST00000639561 TMF1P82094 1093 aa18.83■□□□□ 0.61
ATRIP-208ENST00000639561 PER1O15534 1290 aaPredicted RBP18.83■□□□□ 0.6
ATRIP-208ENST00000639561 TMEM132EQ6IEE7 984 aa18.83■□□□□ 0.6
ATRIP-208ENST00000639561 LRRC59Q96AG4 307 aaKnown RBP18.83■□□□□ 0.6
ATRIP-208ENST00000639561 LRP6O75581 1613 aa18.82■□□□□ 0.6
ATRIP-208ENST00000639561 SIRT1Q96EB6 747 aa18.82■□□□□ 0.6
ATRIP-208ENST00000639561 KTN1Q86UP2 1357 aaKnown RBP18.81■□□□□ 0.6
ATRIP-208ENST00000639561 FKBP8Q14318 412 aa18.81■□□□□ 0.6
ATRIP-208ENST00000639561 MEX3CQ5U5Q3 659 aaKnown RBP18.81■□□□□ 0.6
ATRIP-208ENST00000639561 FMN2Q9NZ56 1722 aa18.8■□□□□ 0.6
ATRIP-208ENST00000639561 ZBED9Q6R2W3 1325 aa18.8■□□□□ 0.6
ATRIP-208ENST00000639561 CFAP70Q5T0N1 1121 aa18.79■□□□□ 0.6
ATRIP-208ENST00000639561 DLC1Q96QB1 1528 aa18.79■□□□□ 0.6
ATRIP-208ENST00000639561 RALBP1Q15311 655 aa18.79■□□□□ 0.6
ATRIP-208ENST00000639561 WAPLQ7Z5K2 1190 aa18.79■□□□□ 0.6
ATRIP-208ENST00000639561 MYBBP1AQ9BQG0 1328 aaKnown RBP18.78■□□□□ 0.6
ATRIP-208ENST00000639561 PARD3Q8TEW0 1356 aa18.78■□□□□ 0.6
ATRIP-208ENST00000639561 PLEKHH1Q9ULM0 1364 aa18.78■□□□□ 0.6
ATRIP-208ENST00000639561 PNISRQ8TF01 805 aaKnown RBP18.77■□□□□ 0.6
ATRIP-208ENST00000639561 ORAI2Q96SN7 254 aa18.77■□□□□ 0.6
ATRIP-208ENST00000639561 PNPLA6Q8IY17 1366 aa18.77■□□□□ 0.6
ATRIP-208ENST00000639561 PANK3Q9H999 370 aa18.77■□□□□ 0.6
ATRIP-208ENST00000639561 DDX17Q92841 729 aaKnown RBP18.76■□□□□ 0.59
ATRIP-208ENST00000639561 SOS2Q07890 1332 aaPredicted RBP18.76■□□□□ 0.59
ATRIP-208ENST00000639561 ADGRB1O14514 1584 aa18.76■□□□□ 0.59
ATRIP-208ENST00000639561 KIF1AQ12756 1690 aa18.76■□□□□ 0.59
ATRIP-208ENST00000639561 TMC1Q8TDI8 760 aa18.76■□□□□ 0.59
ATRIP-208ENST00000639561 BRD4O60885 1362 aaPredicted RBP18.75■□□□□ 0.59
ATRIP-208ENST00000639561 POTEAQ6S8J7 498 aa18.75■□□□□ 0.59
ATRIP-208ENST00000639561 EIF3AQ14152 1382 aaKnown RBP18.75■□□□□ 0.59
ATRIP-208ENST00000639561 NPHP3Q7Z494 1330 aa18.75■□□□□ 0.59
ATRIP-208ENST00000639561 NUTM2BA6NNL0 878 aaPredicted RBP18.74■□□□□ 0.59
ATRIP-208ENST00000639561 NUTM2EB1AL46 878 aaPredicted RBP18.74■□□□□ 0.59
ATRIP-208ENST00000639561 ESCO1Q5FWF5 840 aa18.74■□□□□ 0.59
ATRIP-208ENST00000639561 ZNF772Q68DY9 489 aaPredicted RBP18.74■□□□□ 0.59
ATRIP-208ENST00000639561 NUTM2AQ8IVF1 878 aaPredicted RBP18.74■□□□□ 0.59
ATRIP-208ENST00000639561 NEFLP07196 543 aa18.73■□□□□ 0.59
ATRIP-208ENST00000639561 COL22A1Q8NFW1 1626 aaPredicted RBP18.72■□□□□ 0.59
ATRIP-208ENST00000639561 ADGRB2O60241 1585 aa18.72■□□□□ 0.59
ATRIP-208ENST00000639561 PRAM1Q96QH2 718 aa18.71■□□□□ 0.59
ATRIP-208ENST00000639561 MYOM1P52179 1685 aa18.71■□□□□ 0.59
ATRIP-208ENST00000639561 PXDNQ92626 1479 aa18.71■□□□□ 0.59
ATRIP-208ENST00000639561 CC2D1BQ5T0F9 858 aaKnown RBP18.7■□□□□ 0.58
ATRIP-208ENST00000639561 POGKQ9P215 609 aa18.7■□□□□ 0.58
ATRIP-208ENST00000639561 NLRP13Q86W25 1043 aa18.7■□□□□ 0.58
ATRIP-208ENST00000639561 RGPD8O14715 1765 aaPredicted RBP18.69■□□□□ 0.58
ATRIP-208ENST00000639561 NUTM2FA1L443 756 aa18.68■□□□□ 0.58
ATRIP-208ENST00000639561 CDCA8Q53HL2 280 aa18.68■□□□□ 0.58
ATRIP-208ENST00000639561 ANKARQ7Z5J8 1434 aa18.67■□□□□ 0.58
ATRIP-208ENST00000639561 ARHGEF28Q8N1W1 1705 aaKnown RBP18.67■□□□□ 0.58
ATRIP-208ENST00000639561 FOXO3O43524 673 aa18.66■□□□□ 0.58
ATRIP-208ENST00000639561 TRAK1Q9UPV9 953 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms