RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 TRIM52Q96A61 297 aa2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 ORAI2Q96SN7 254 aa2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 HFM1A2PYH4 1435 aa2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 SPATA31E1Q6ZUB1 1445 aa2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 ADGRL3Q9HAR2 1447 aa2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 CDC42BPGQ6DT37 1551 aa2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 PNPLA6Q8IY17 1366 aa2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 PIK3R4Q99570 1358 aa2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 JCADQ9P266 1359 aa2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 TUBGCP6Q96RT7 1819 aa2.47□□□□□ -2.01
SYNGAP1-216ENST00000636640 COL18A1P39060 1754 aa2.46□□□□□ -2.02
SYNGAP1-216ENST00000636640 AFF2P51816 1311 aa2.46□□□□□ -2.02
SYNGAP1-216ENST00000636640 KIAA1210Q9ULL0 1709 aa2.46□□□□□ -2.02
SYNGAP1-216ENST00000636640 ADGRB1O14514 1584 aa2.46□□□□□ -2.02
SYNGAP1-216ENST00000636640 RGS12O14924 1447 aa2.46□□□□□ -2.02
SYNGAP1-216ENST00000636640 SETD5Q9C0A6 1442 aa2.46□□□□□ -2.02
SYNGAP1-216ENST00000636640 XPCQ01831 940 aaPredicted RBP2.46□□□□□ -2.02
SYNGAP1-216ENST00000636640 RGL3Q3MIN7 710 aa2.46□□□□□ -2.02
SYNGAP1-216ENST00000636640 WAPLQ7Z5K2 1190 aa2.46□□□□□ -2.02
SYNGAP1-216ENST00000636640 C14orf37Q86TY3 774 aa2.46□□□□□ -2.02
SYNGAP1-216ENST00000636640 C19orf44Q9H6X5 657 aa2.46□□□□□ -2.02
SYNGAP1-216ENST00000636640 TRPM1Q7Z4N2 1603 aa2.46□□□□□ -2.02
SYNGAP1-216ENST00000636640 RGPD1P0DJD0 1748 aa2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 NUP188Q5SRE5 1749 aa2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 ADGRB2O60241 1585 aa2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 DCCP43146 1447 aa2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 NCOA3Q9Y6Q9 1424 aa2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 RREB1Q92766 1687 aa2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 PLEKHG5O94827 1062 aa2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 ADAMTS2O95450 1211 aa2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 ATF3P18847 181 aa2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 UPF1Q92900 1129 aaKnown RBP eCLIP2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 SLC4A1APQ9BWU0 796 aaKnown RBP2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 STK26Q9P289 416 aa2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 COL14A1Q05707 1796 aaKnown RBP2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 MON2Q7Z3U7 1717 aa2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 SHANK3Q9BYB0 1731 aa2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 MYOM2P54296 1465 aa2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 BCL9LQ86UU0 1499 aa2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 NRXN1Q9ULB1 1477 aa2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 MAP2P11137 1827 aaKnown RBP2.45□□□□□ -2.02
SYNGAP1-216ENST00000636640 SOS2Q07890 1332 aaPredicted RBP2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 PIK3C2AO00443 1686 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 LMO7Q8WWI1 1683 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 THSD7AQ9UPZ6 1657 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 CAMTA1Q9Y6Y1 1673 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 PIK3C2GO75747 1445 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 PTCH1Q13635 1447 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 PRAG1Q86YV5 1406 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 YTHDC2Q9H6S0 1430 aaKnown RBP2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 SAFB2Q14151 953 aaKnown RBP eCLIP2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 CFAP70Q5T0N1 1121 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 CADPS2Q86UW7 1296 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 CABLES1Q8TDN4 633 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 C8orf37Q96NL8 207 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 MPHOSPH9Q99550 1183 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 PEAK1Q9H792 1746 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 RAB3GAP2Q9H2M9 1393 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 ITGB4P16144 1822 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 CHD4Q14839 1912 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 NRKQ7Z2Y5 1582 aa2.44□□□□□ -2.02
SYNGAP1-216ENST00000636640 SPATA31A6Q5VVP1 1343 aa2.43□□□□□ -2.02
SYNGAP1-216ENST00000636640 PRR36Q9H6K5 1346 aa2.43□□□□□ -2.02
SYNGAP1-216ENST00000636640 TECPR2O15040 1411 aa2.43□□□□□ -2.02
SYNGAP1-216ENST00000636640 ATRNO75882 1429 aa2.43□□□□□ -2.02
SYNGAP1-216ENST00000636640 SLIT2O94813 1529 aa2.43□□□□□ -2.02
SYNGAP1-216ENST00000636640 PARP4Q9UKK3 1724 aaKnown RBP2.43□□□□□ -2.02
SYNGAP1-216ENST00000636640 BTAF1O14981 1849 aa2.43□□□□□ -2.02
SYNGAP1-216ENST00000636640 TAF1LQ8IZX4 1826 aa2.43□□□□□ -2.02
SYNGAP1-216ENST00000636640 FOXO3O43524 673 aa2.43□□□□□ -2.02
SYNGAP1-216ENST00000636640 HDGFP51858 240 aaKnown RBP2.43□□□□□ -2.02
SYNGAP1-216ENST00000636640 ESCO1Q5FWF5 840 aa2.43□□□□□ -2.02
SYNGAP1-216ENST00000636640 MEX3CQ5U5Q3 659 aaKnown RBP2.43□□□□□ -2.02
SYNGAP1-216ENST00000636640 QTRT2Q9H974 415 aaKnown RBP2.43□□□□□ -2.02
SYNGAP1-216ENST00000636640 LRPPRCP42704 1394 aaKnown RBP2.43□□□□□ -2.02
SYNGAP1-216ENST00000636640 DHX57Q6P158 1386 aaKnown RBP2.43□□□□□ -2.02
SYNGAP1-216ENST00000636640 CDK12Q9NYV4 1490 aaPredicted RBP2.43□□□□□ -2.02
SYNGAP1-216ENST00000636640 CCDC144AA2RUR9 1427 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 DLC1Q96QB1 1528 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 LRRC37A3O60309 1634 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 KIF20BQ96Q89 1820 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 CCDC88AQ3V6T2 1871 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 CASZ1Q86V15 1759 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 USP54Q70EL1 1684 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 RALGAPBQ86X10 1494 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 ABCC11Q96J66 1382 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 ANKRD30BQ9BXX2 1392 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 VGFO15240 615 aaPredicted RBP2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 RXRBP28702 533 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 FAM182BQ5T319 152 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 KRT28Q7Z3Y7 464 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 PMFBP1Q8TBY8 1022 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 LRRC59Q96AG4 307 aaKnown RBP2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 NGLY1Q96IV0 654 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 HIRIP3Q9BW71 556 aaPredicted RBP2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 C14orf93Q9H972 538 aaKnown RBP2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 USP21Q9UK80 565 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 KDM2AQ9Y2K7 1162 aa2.42□□□□□ -2.02
SYNGAP1-216ENST00000636640 LRP5O75197 1615 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms