RNA–Protein interactions for RNA: ENST00000636605.1

CLN8-210, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-210ENST00000636605 CD46P15529 392 aa9.78□□□□□ -0.84
CLN8-210ENST00000636605 ATP6V1AP38606 617 aa9.78□□□□□ -0.84
CLN8-210ENST00000636605 TRIM67Q6ZTA4 783 aa9.78□□□□□ -0.84
CLN8-210ENST00000636605 SPSB2Q99619 263 aa9.78□□□□□ -0.84
CLN8-210ENST00000636605 SLC19A1P41440 591 aa9.77□□□□□ -0.85
CLN8-210ENST00000636605 CCDC102AQ96A19 550 aa9.77□□□□□ -0.85
CLN8-210ENST00000636605 SLC27A5Q9Y2P5 690 aa9.77□□□□□ -0.85
CLN8-210ENST00000636605 SALL2Q9Y467 1007 aaPredicted RBP9.77□□□□□ -0.85
CLN8-210ENST00000636605 PLA2G2CQ5R387 149 aa9.76□□□□□ -0.85
CLN8-210ENST00000636605 SPRYD7Q5W111 196 aa9.76□□□□□ -0.85
CLN8-210ENST00000636605 LIAT1Q6ZQX7 453 aa9.75□□□□□ -0.85
CLN8-210ENST00000636605 PDZRN3Q9UPQ7 1066 aa9.75□□□□□ -0.85
CLN8-210ENST00000636605 URB2Q14146 1524 aaKnown RBP9.73□□□□□ -0.85
CLN8-210ENST00000636605 MDM2Q00987 491 aaPredicted RBP9.73□□□□□ -0.85
CLN8-210ENST00000636605 BRICD5Q6PL45 260 aa9.73□□□□□ -0.85
CLN8-210ENST00000636605 FAM160A2Q8N612 972 aaPredicted RBP9.73□□□□□ -0.85
CLN8-210ENST00000636605 PRR20EP86478 221 aa9.72□□□□□ -0.85
CLN8-210ENST00000636605 PRR20CP86479 221 aa9.72□□□□□ -0.85
CLN8-210ENST00000636605 PRR20DP86480 221 aa9.72□□□□□ -0.85
CLN8-210ENST00000636605 PRR20BP86481 221 aa9.72□□□□□ -0.85
CLN8-210ENST00000636605 PRR20AP86496 221 aa9.72□□□□□ -0.85
CLN8-210ENST00000636605 LMOD2Q6P5Q4 547 aa9.72□□□□□ -0.85
CLN8-210ENST00000636605 ZNF598Q86UK7 904 aaKnown RBP9.72□□□□□ -0.85
CLN8-210ENST00000636605 DNMBPQ6XZF7 1577 aa9.71□□□□□ -0.85
CLN8-210ENST00000636605 FMNL1O95466 1100 aaPredicted RBP9.71□□□□□ -0.86
CLN8-210ENST00000636605 MSS51Q4VC12 460 aa9.71□□□□□ -0.86
CLN8-210ENST00000636605 TOPBP1Q92547 1522 aa9.71□□□□□ -0.86
CLN8-210ENST00000636605 TRAF7Q6Q0C0 670 aa9.7□□□□□ -0.86
CLN8-210ENST00000636605 RNF19BQ6ZMZ0 732 aa9.7□□□□□ -0.86
CLN8-210ENST00000636605 GPCPD1Q9NPB8 672 aa9.7□□□□□ -0.86
CLN8-210ENST00000636605 GRIPAP1Q4V328 841 aa9.69□□□□□ -0.86
CLN8-210ENST00000636605 IFT140Q96RY7 1462 aa9.69□□□□□ -0.86
CLN8-210ENST00000636605 PRDM9Q9NQV7 894 aa9.69□□□□□ -0.86
CLN8-210ENST00000636605 FAM217BQ9NTX9 383 aaPredicted RBP9.69□□□□□ -0.86
CLN8-210ENST00000636605 KDM4AO75164 1064 aa9.68□□□□□ -0.86
CLN8-210ENST00000636605 CLCN1P35523 988 aa9.68□□□□□ -0.86
CLN8-210ENST00000636605 ZNF697Q5TEC3 545 aa9.68□□□□□ -0.86
CLN8-210ENST00000636605 GDF9O60383 454 aa9.67□□□□□ -0.86
CLN8-210ENST00000636605 ZMYND10O75800 440 aa9.67□□□□□ -0.86
CLN8-210ENST00000636605 USP46P62068 366 aa9.67□□□□□ -0.86
CLN8-210ENST00000636605 BARGINQ6ZT62 677 aa9.67□□□□□ -0.86
CLN8-210ENST00000636605 FCF1Q9Y324 198 aaKnown RBP9.67□□□□□ -0.86
CLN8-210ENST00000636605 HOXA2O43364 376 aa9.66□□□□□ -0.86
CLN8-210ENST00000636605 RPIAP49247 311 aa9.66□□□□□ -0.86
CLN8-210ENST00000636605 Q3C1V9 767 aa9.66□□□□□ -0.86
CLN8-210ENST00000636605 REPIN1Q9BWE0 567 aaKnown RBP9.65□□□□□ -0.86
CLN8-210ENST00000636605 MMP16P51512 607 aa9.64□□□□□ -0.87
CLN8-210ENST00000636605 ZC3H15Q8WU90 426 aaKnown RBP9.64□□□□□ -0.87
CLN8-210ENST00000636605 HLA-CQ95604 372 aa9.64□□□□□ -0.87
CLN8-210ENST00000636605 PKD2L1Q9P0L9 805 aa9.63□□□□□ -0.87
CLN8-210ENST00000636605 SOGA1O94964 1423 aa9.63□□□□□ -0.87
CLN8-210ENST00000636605 WRNQ14191 1432 aaPredicted RBP eCLIP9.63□□□□□ -0.87
CLN8-210ENST00000636605 POLA1P09884 1462 aaPredicted RBP9.62□□□□□ -0.87
CLN8-210ENST00000636605 AMHR2Q16671 573 aa9.62□□□□□ -0.87
CLN8-210ENST00000636605 DXOO77932 396 aaKnown RBP9.61□□□□□ -0.87
CLN8-210ENST00000636605 CUX1P39880 1505 aa9.61□□□□□ -0.87
CLN8-210ENST00000636605 WDR97A6NE52 1622 aa9.6□□□□□ -0.87
CLN8-210ENST00000636605 TNFRSF10AO00220 468 aa9.6□□□□□ -0.87
CLN8-210ENST00000636605 USB1Q9BQ65 265 aaKnown RBP9.6□□□□□ -0.87
CLN8-210ENST00000636605 FGD5Q6ZNL6 1462 aa9.59□□□□□ -0.87
CLN8-210ENST00000636605 DGAT1O75907 488 aa9.59□□□□□ -0.87
CLN8-210ENST00000636605 TARBP1Q13395 1621 aaKnown RBP9.58□□□□□ -0.88
CLN8-210ENST00000636605 GUCA2AQ02747 115 aa9.58□□□□□ -0.88
CLN8-210ENST00000636605 TOP2BQ02880 1626 aa9.57□□□□□ -0.88
CLN8-210ENST00000636605 MYT1Q01538 1121 aa9.57□□□□□ -0.88
CLN8-210ENST00000636605 PKDCCQ504Y2 493 aa9.56□□□□□ -0.88
CLN8-210ENST00000636605 KRI1Q8N9T8 703 aaKnown RBP9.56□□□□□ -0.88
CLN8-210ENST00000636605 BIVM-ERCC5R4GMW8 1640 aa9.56□□□□□ -0.88
CLN8-210ENST00000636605 ZNF608Q9ULD9 1512 aaPredicted RBP9.56□□□□□ -0.88
CLN8-210ENST00000636605 RAD54L2Q9Y4B4 1467 aa9.55□□□□□ -0.88
CLN8-210ENST00000636605 CD2BP2O95400 341 aaKnown RBP9.55□□□□□ -0.88
CLN8-210ENST00000636605 SSTR3P32745 418 aaPredicted RBP9.55□□□□□ -0.88
CLN8-210ENST00000636605 TOR4AQ9NXH8 423 aa9.55□□□□□ -0.88
CLN8-210ENST00000636605 PCDHGC3Q9UN70 934 aa9.54□□□□□ -0.88
CLN8-210ENST00000636605 ABCA10Q8WWZ4 1543 aa9.54□□□□□ -0.88
CLN8-210ENST00000636605 EIF4G3O43432 1585 aaKnown RBP9.54□□□□□ -0.88
CLN8-210ENST00000636605 AQRO60306 1485 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLN8-210ENST00000636605 TDRD9Q8NDG6 1382 aaKnown RBP9.53□□□□□ -0.88
CLN8-210ENST00000636605 FAM187AA6NFU0 413 aa9.53□□□□□ -0.88
CLN8-210ENST00000636605 TRIM32Q13049 653 aa9.53□□□□□ -0.88
CLN8-210ENST00000636605 TTLL12Q14166 644 aaPredicted RBP9.53□□□□□ -0.88
CLN8-210ENST00000636605 GIGYF2Q6Y7W6 1299 aaKnown RBP9.53□□□□□ -0.88
CLN8-210ENST00000636605 NUTM1Q86Y26 1132 aa9.53□□□□□ -0.88
CLN8-210ENST00000636605 SPIRE2Q8WWL2 714 aa9.53□□□□□ -0.88
CLN8-210ENST00000636605 JUNDP17535 347 aa9.52□□□□□ -0.89
CLN8-210ENST00000636605 FOXC1Q12948 553 aa9.52□□□□□ -0.89
CLN8-210ENST00000636605 RETREG3Q86VR2 466 aa9.52□□□□□ -0.89
CLN8-210ENST00000636605 GRIN2BQ13224 1484 aa9.52□□□□□ -0.89
CLN8-210ENST00000636605 SYNJ1O43426 1573 aa9.51□□□□□ -0.89
CLN8-210ENST00000636605 PARP9Q8IXQ6 854 aa9.51□□□□□ -0.89
CLN8-210ENST00000636605 SYMPKQ92797 1274 aaKnown RBP9.51□□□□□ -0.89
CLN8-210ENST00000636605 GAPVD1Q14C86 1478 aa9.51□□□□□ -0.89
CLN8-210ENST00000636605 WNT7AO00755 349 aa9.5□□□□□ -0.89
CLN8-210ENST00000636605 TRIM66O15016 1216 aa9.5□□□□□ -0.89
CLN8-210ENST00000636605 FDX1P10109 184 aa9.5□□□□□ -0.89
CLN8-210ENST00000636605 CRIPAKQ8N1N5 446 aa9.5□□□□□ -0.89
CLN8-210ENST00000636605 MAGI1Q96QZ7 1491 aaPredicted RBP9.5□□□□□ -0.89
CLN8-210ENST00000636605 ZBTB24O43167 697 aaPredicted RBP9.49□□□□□ -0.89
CLN8-210ENST00000636605 AVPP01185 164 aa9.49□□□□□ -0.89
CLN8-210ENST00000636605 CHMP7Q8WUX9 453 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms