RNA–Protein interactions for RNA: ENST00000635852.1

LINC02009-201, Transcript of long intergenic non-protein coding RNA 2009, humanhuman

TSL 3 BASIC

Gene LINC02009, Length 2,951 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02009-201ENST00000635852 MADDQ8WXG6 1647 aa11.36□□□□□ -0.59
LINC02009-201ENST00000635852 SCAPERQ9BY12 1400 aa11.35□□□□□ -0.59
LINC02009-201ENST00000635852 NCOA3Q9Y6Q9 1424 aa11.35□□□□□ -0.59
LINC02009-201ENST00000635852 POLR3AO14802 1390 aaPredicted RBP11.35□□□□□ -0.59
LINC02009-201ENST00000635852 MVPQ14764 893 aaKnown RBP11.35□□□□□ -0.59
LINC02009-201ENST00000635852 PDCL3Q9H2J4 239 aa11.35□□□□□ -0.59
LINC02009-201ENST00000635852 TCP11L2Q8N4U5 519 aa11.34□□□□□ -0.59
LINC02009-201ENST00000635852 CHMP7Q8WUX9 453 aaPredicted RBP11.34□□□□□ -0.59
LINC02009-201ENST00000635852 RUNDC1Q96C34 613 aa11.34□□□□□ -0.59
LINC02009-201ENST00000635852 WDR63Q8IWG1 891 aa11.34□□□□□ -0.59
LINC02009-201ENST00000635852 PHF23Q9BUL5 403 aaPredicted RBP11.34□□□□□ -0.59
LINC02009-201ENST00000635852 KIAA1211Q6ZU35 1233 aa11.33□□□□□ -0.6
LINC02009-201ENST00000635852 SKOR2Q2VWA4 1001 aaPredicted RBP11.33□□□□□ -0.6
LINC02009-201ENST00000635852 SMC5Q8IY18 1101 aa11.33□□□□□ -0.6
LINC02009-201ENST00000635852 SNX21Q969T3 373 aa11.33□□□□□ -0.6
LINC02009-201ENST00000635852 GBP4Q96PP9 640 aa11.33□□□□□ -0.6
LINC02009-201ENST00000635852 CDC42BPBQ9Y5S2 1711 aa11.32□□□□□ -0.6
LINC02009-201ENST00000635852 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
LINC02009-201ENST00000635852 SYCP2Q9BX26 1530 aa11.32□□□□□ -0.6
LINC02009-201ENST00000635852 MAST1Q9Y2H9 1570 aa11.32□□□□□ -0.6
LINC02009-201ENST00000635852 RBM25P49756 843 aaKnown RBP11.31□□□□□ -0.6
LINC02009-201ENST00000635852 RAB3GAP1Q15042 981 aa11.31□□□□□ -0.6
LINC02009-201ENST00000635852 DZIP1LQ8IYY4 767 aaKnown RBP11.31□□□□□ -0.6
LINC02009-201ENST00000635852 KDM5AP29375 1690 aaKnown RBP11.31□□□□□ -0.6
LINC02009-201ENST00000635852 CCDC173Q0VFZ6 552 aa11.31□□□□□ -0.6
LINC02009-201ENST00000635852 ZKSCAN2Q63HK3 967 aa11.31□□□□□ -0.6
LINC02009-201ENST00000635852 PREX2Q70Z35 1606 aa11.31□□□□□ -0.6
LINC02009-201ENST00000635852 HSP90AB1P08238 724 aaKnown RBP11.31□□□□□ -0.6
LINC02009-201ENST00000635852 FBLN2P98095 1184 aa11.31□□□□□ -0.6
LINC02009-201ENST00000635852 HDAC1Q13547 482 aaPredicted RBP11.31□□□□□ -0.6
LINC02009-201ENST00000635852 FTSJ3Q8IY81 847 aaKnown RBP11.31□□□□□ -0.6
LINC02009-201ENST00000635852 PPP1R9BQ96SB3 815 aa11.31□□□□□ -0.6
LINC02009-201ENST00000635852 IQSEC2Q5JU85 1478 aa11.3□□□□□ -0.6
LINC02009-201ENST00000635852 ZSCAN30Q86W11 494 aa11.3□□□□□ -0.6
LINC02009-201ENST00000635852 OFD1O75665 1012 aa11.29□□□□□ -0.6
LINC02009-201ENST00000635852 PTMSP20962 102 aa11.29□□□□□ -0.6
LINC02009-201ENST00000635852 ERVK-7P63135 1459 aa11.29□□□□□ -0.6
LINC02009-201ENST00000635852 KANK1Q14678 1352 aa11.29□□□□□ -0.6
LINC02009-201ENST00000635852 CEP152O94986 1710 aa11.29□□□□□ -0.6
LINC02009-201ENST00000635852 TNNT2P45379 298 aaPredicted RBP11.29□□□□□ -0.6
LINC02009-201ENST00000635852 STAC3Q96MF2 364 aa11.29□□□□□ -0.6
LINC02009-201ENST00000635852 DUOX2Q9NRD8 1548 aa11.29□□□□□ -0.6
LINC02009-201ENST00000635852 TTC37Q6PGP7 1564 aa11.29□□□□□ -0.6
LINC02009-201ENST00000635852 NASPP49321 788 aaPredicted RBP11.28□□□□□ -0.6
LINC02009-201ENST00000635852 CCDC27Q2M243 656 aa11.28□□□□□ -0.6
LINC02009-201ENST00000635852 MORC1Q86VD1 984 aa11.28□□□□□ -0.6
LINC02009-201ENST00000635852 SHPRHQ149N8 1683 aa11.28□□□□□ -0.6
LINC02009-201ENST00000635852 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
LINC02009-201ENST00000635852 RIPK4P57078 832 aa11.27□□□□□ -0.61
LINC02009-201ENST00000635852 SPHKAPQ2M3C7 1700 aa11.27□□□□□ -0.61
LINC02009-201ENST00000635852 SLC24A1O60721 1099 aa11.27□□□□□ -0.61
LINC02009-201ENST00000635852 ARHGAP5Q13017 1502 aa11.27□□□□□ -0.61
LINC02009-201ENST00000635852 RBM10P98175 930 aaKnown RBP11.26□□□□□ -0.61
LINC02009-201ENST00000635852 CALD1Q05682 793 aaKnown RBP11.26□□□□□ -0.61
LINC02009-201ENST00000635852 ITPRIPQ8IWB1 547 aa11.26□□□□□ -0.61
LINC02009-201ENST00000635852 KIF2CQ99661 725 aa11.26□□□□□ -0.61
LINC02009-201ENST00000635852 TRIM27P14373 513 aa11.26□□□□□ -0.61
LINC02009-201ENST00000635852 MSNP26038 577 aaKnown RBP11.26□□□□□ -0.61
LINC02009-201ENST00000635852 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.26□□□□□ -0.61
LINC02009-201ENST00000635852 DDX19BQ9UMR2 479 aa11.26□□□□□ -0.61
LINC02009-201ENST00000635852 CD2BP2O95400 341 aaKnown RBP11.25□□□□□ -0.61
LINC02009-201ENST00000635852 CFAP70Q5T0N1 1121 aa11.25□□□□□ -0.61
LINC02009-201ENST00000635852 ANP32BQ92688 251 aaKnown RBP11.25□□□□□ -0.61
LINC02009-201ENST00000635852 SMC4Q9NTJ3 1288 aa11.25□□□□□ -0.61
LINC02009-201ENST00000635852 SSFA2P28290 1259 aa11.25□□□□□ -0.61
LINC02009-201ENST00000635852 TERF1P54274 439 aa11.25□□□□□ -0.61
LINC02009-201ENST00000635852 TSR2Q969E8 191 aaKnown RBP11.25□□□□□ -0.61
LINC02009-201ENST00000635852 NUCB1Q02818 461 aa11.24□□□□□ -0.61
LINC02009-201ENST00000635852 SHROOM2Q13796 1616 aa11.24□□□□□ -0.61
LINC02009-201ENST00000635852 K7ELQ4 463 aaPredicted RBP11.24□□□□□ -0.61
LINC02009-201ENST00000635852 MTHFSP49914 203 aa11.24□□□□□ -0.61
LINC02009-201ENST00000635852 KLHL40Q2TBA0 621 aa11.24□□□□□ -0.61
LINC02009-201ENST00000635852 LNPKQ9C0E8 428 aa11.24□□□□□ -0.61
LINC02009-201ENST00000635852 DDX49Q9Y6V7 483 aaKnown RBP11.24□□□□□ -0.61
LINC02009-201ENST00000635852 NSD3Q9BZ95 1437 aa11.24□□□□□ -0.61
LINC02009-201ENST00000635852 TRPM2O94759 1503 aa11.23□□□□□ -0.61
LINC02009-201ENST00000635852 GOLGA6L22H0YM25 854 aa11.23□□□□□ -0.61
LINC02009-201ENST00000635852 CT47B1P0C2W7 299 aaPredicted RBP11.23□□□□□ -0.61
LINC02009-201ENST00000635852 EXOSC9Q06265 439 aaKnown RBP11.23□□□□□ -0.61
LINC02009-201ENST00000635852 ATF7IPQ6VMQ6 1270 aa11.23□□□□□ -0.61
LINC02009-201ENST00000635852 SSH1Q8WYL5 1049 aa11.23□□□□□ -0.61
LINC02009-201ENST00000635852 IBTKQ9P2D0 1353 aaPredicted RBP11.23□□□□□ -0.61
LINC02009-201ENST00000635852 CHD1O14646 1710 aa11.23□□□□□ -0.61
LINC02009-201ENST00000635852 CLEC17AQ6ZS10 378 aa11.23□□□□□ -0.61
LINC02009-201ENST00000635852 ZBTB40Q9NUA8 1239 aa11.23□□□□□ -0.61
LINC02009-201ENST00000635852 PRDM4Q9UKN5 801 aa11.23□□□□□ -0.61
LINC02009-201ENST00000635852 R3HCC1Q9Y3T6 440 aaKnown RBP11.23□□□□□ -0.61
LINC02009-201ENST00000635852 NCBP3Q53F19 620 aaKnown RBP11.22□□□□□ -0.61
LINC02009-201ENST00000635852 TMEM57Q8N5G2 664 aa11.22□□□□□ -0.61
LINC02009-201ENST00000635852 GAS2L2Q8NHY3 880 aa11.22□□□□□ -0.61
LINC02009-201ENST00000635852 RBM42Q9BTD8 480 aaKnown RBP11.22□□□□□ -0.61
LINC02009-201ENST00000635852 PTPRTO14522 1441 aa11.22□□□□□ -0.61
LINC02009-201ENST00000635852 BAG4O95429 457 aaKnown RBP11.22□□□□□ -0.61
LINC02009-201ENST00000635852 FAM13BQ9NYF5 915 aa11.22□□□□□ -0.61
LINC02009-201ENST00000635852 NOB1Q9ULX3 412 aaKnown RBP11.22□□□□□ -0.61
LINC02009-201ENST00000635852 CLTCL1P53675 1640 aa11.22□□□□□ -0.61
LINC02009-201ENST00000635852 CHD1LQ86WJ1 897 aa11.22□□□□□ -0.61
LINC02009-201ENST00000635852 CFAP53Q96M91 514 aa11.22□□□□□ -0.61
LINC02009-201ENST00000635852 ZNF518AQ6AHZ1 1483 aa11.21□□□□□ -0.61
LINC02009-201ENST00000635852 BMP2KLQ5H9B9 411 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms