RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 COL9A1P20849 921 aa11.57□□□□□ -0.56
SMARCA2-244ENST00000635659 ARSIQ5FYB1 569 aa11.57□□□□□ -0.56
SMARCA2-244ENST00000635659 AEBP1Q8IUX7 1158 aa11.57□□□□□ -0.56
SMARCA2-244ENST00000635659 KHSRPQ92945 711 aaKnown RBP eCLIP11.57□□□□□ -0.56
SMARCA2-244ENST00000635659 GLMNQ92990 594 aa11.57□□□□□ -0.56
SMARCA2-244ENST00000635659 TMEM134Q9H6X4 195 aa11.57□□□□□ -0.56
SMARCA2-244ENST00000635659 TSKSQ9UJT2 592 aa11.57□□□□□ -0.56
SMARCA2-244ENST00000635659 SYNJ2O15056 1496 aa11.57□□□□□ -0.56
SMARCA2-244ENST00000635659 PPP1R3GB7ZBB8 358 aa11.56□□□□□ -0.56
SMARCA2-244ENST00000635659 USP17L8P0C7I0 530 aa11.56□□□□□ -0.56
SMARCA2-244ENST00000635659 PRPF38BQ5VTL8 546 aaKnown RBP11.56□□□□□ -0.56
SMARCA2-244ENST00000635659 NUDT18Q6ZVK8 323 aa11.56□□□□□ -0.56
SMARCA2-244ENST00000635659 BCL2L12Q9HB09 334 aa11.56□□□□□ -0.56
SMARCA2-244ENST00000635659 POM121CA8CG34 1229 aa11.55□□□□□ -0.56
SMARCA2-244ENST00000635659 RIMBP2O15034 1052 aa11.55□□□□□ -0.56
SMARCA2-244ENST00000635659 NDUFV2P19404 249 aa11.55□□□□□ -0.56
SMARCA2-244ENST00000635659 PPP4R3BQ5MIZ7 849 aa11.55□□□□□ -0.56
SMARCA2-244ENST00000635659 ZNF710Q8N1W2 664 aa11.55□□□□□ -0.56
SMARCA2-244ENST00000635659 PDE4CQ08493 712 aa11.54□□□□□ -0.56
SMARCA2-244ENST00000635659 RTL5Q5HYW3 569 aaPredicted RBP11.54□□□□□ -0.56
SMARCA2-244ENST00000635659 PCDHB15Q9Y5E8 787 aa11.54□□□□□ -0.56
SMARCA2-244ENST00000635659 PSDA5PKW4 1024 aaPredicted RBP11.53□□□□□ -0.56
SMARCA2-244ENST00000635659 HOXB3P14651 431 aaPredicted RBP11.53□□□□□ -0.56
SMARCA2-244ENST00000635659 GPR153Q6NV75 609 aa11.53□□□□□ -0.56
SMARCA2-244ENST00000635659 NUTM2BA6NNL0 878 aaPredicted RBP11.52□□□□□ -0.57
SMARCA2-244ENST00000635659 NUTM2EB1AL46 878 aaPredicted RBP11.52□□□□□ -0.57
SMARCA2-244ENST00000635659 C3orf80F5H4A9 247 aa11.52□□□□□ -0.57
SMARCA2-244ENST00000635659 NUTM2DQ5VT03 806 aaPredicted RBP11.52□□□□□ -0.57
SMARCA2-244ENST00000635659 NUTM2AQ8IVF1 878 aaPredicted RBP11.52□□□□□ -0.57
SMARCA2-244ENST00000635659 TATDN2Q93075 761 aa11.52□□□□□ -0.57
SMARCA2-244ENST00000635659 PNMA3Q9UL41 463 aa11.52□□□□□ -0.57
SMARCA2-244ENST00000635659 NDUFB9Q9Y6M9 179 aa11.52□□□□□ -0.57
SMARCA2-244ENST00000635659 ARAP1Q96P48 1450 aa11.51□□□□□ -0.57
SMARCA2-244ENST00000635659 ERICH3Q5RHP9 1530 aa11.51□□□□□ -0.57
SMARCA2-244ENST00000635659 IRF5Q13568 498 aa11.51□□□□□ -0.57
SMARCA2-244ENST00000635659 ZBTB3Q9H5J0 574 aa11.51□□□□□ -0.57
SMARCA2-244ENST00000635659 LHX6Q9UPM6 363 aa11.51□□□□□ -0.57
SMARCA2-244ENST00000635659 ACIN1Q9UKV3 1341 aaKnown RBP11.51□□□□□ -0.57
SMARCA2-244ENST00000635659 TRIM6-TRIM34B2RNG4 842 aa11.5□□□□□ -0.57
SMARCA2-244ENST00000635659 KDM4AO75164 1064 aa11.5□□□□□ -0.57
SMARCA2-244ENST00000635659 PTPREP23469 700 aa11.5□□□□□ -0.57
SMARCA2-244ENST00000635659 USP46P62068 366 aa11.5□□□□□ -0.57
SMARCA2-244ENST00000635659 CABLES1Q8TDN4 633 aa11.5□□□□□ -0.57
SMARCA2-244ENST00000635659 GJD4Q96KN9 370 aaPredicted RBP11.5□□□□□ -0.57
SMARCA2-244ENST00000635659 GRIN2AQ12879 1464 aa11.5□□□□□ -0.57
SMARCA2-244ENST00000635659 CEP170Q5SW79 1584 aa11.5□□□□□ -0.57
SMARCA2-244ENST00000635659 PACS2Q86VP3 889 aa11.49□□□□□ -0.57
SMARCA2-244ENST00000635659 RDH13Q8NBN7 331 aa11.49□□□□□ -0.57
SMARCA2-244ENST00000635659 POTEB2H3BUK9 544 aa11.48□□□□□ -0.57
SMARCA2-244ENST00000635659 SHROOM2Q13796 1616 aa11.47□□□□□ -0.57
SMARCA2-244ENST00000635659 HOXA2O43364 376 aa11.47□□□□□ -0.57
SMARCA2-244ENST00000635659 WASHC4Q2M389 1173 aa11.47□□□□□ -0.57
SMARCA2-244ENST00000635659 PBXIP1Q96AQ6 731 aa11.47□□□□□ -0.57
SMARCA2-244ENST00000635659 NUP160Q12769 1436 aa11.45□□□□□ -0.58
SMARCA2-244ENST00000635659 FDX1P10109 184 aa11.45□□□□□ -0.58
SMARCA2-244ENST00000635659 GCGRP47871 477 aa11.45□□□□□ -0.58
SMARCA2-244ENST00000635659 TMCO4Q5TGY1 634 aa11.45□□□□□ -0.58
SMARCA2-244ENST00000635659 PATL2C9JE40 543 aaKnown RBP11.44□□□□□ -0.58
SMARCA2-244ENST00000635659 RSPH4AQ5TD94 716 aa11.44□□□□□ -0.58
SMARCA2-244ENST00000635659 ADAMTS19Q8TE59 1207 aa11.44□□□□□ -0.58
SMARCA2-244ENST00000635659 FHAD1B1AJZ9 1412 aa11.43□□□□□ -0.58
SMARCA2-244ENST00000635659 HDGFL1Q5TGJ6 251 aa11.43□□□□□ -0.58
SMARCA2-244ENST00000635659 CHMP7Q8WUX9 453 aaPredicted RBP11.43□□□□□ -0.58
SMARCA2-244ENST00000635659 OTUD5Q96G74 571 aa11.43□□□□□ -0.58
SMARCA2-244ENST00000635659 USTQ9Y2C2 406 aa11.43□□□□□ -0.58
SMARCA2-244ENST00000635659 RUSC2Q8N2Y8 1516 aa11.43□□□□□ -0.58
SMARCA2-244ENST00000635659 ERCC6L2Q5T890 1561 aa11.42□□□□□ -0.58
SMARCA2-244ENST00000635659 GPR37L1O60883 481 aa11.42□□□□□ -0.58
SMARCA2-244ENST00000635659 GZF1Q9H116 711 aaPredicted RBP11.42□□□□□ -0.58
SMARCA2-244ENST00000635659 CUL7Q14999 1698 aa11.42□□□□□ -0.58
SMARCA2-244ENST00000635659 TRIM34Q9BYJ4 488 aa11.41□□□□□ -0.58
SMARCA2-244ENST00000635659 HMX1Q9NP08 348 aaPredicted RBP11.41□□□□□ -0.58
SMARCA2-244ENST00000635659 SMAPO00193 183 aa11.4□□□□□ -0.58
SMARCA2-244ENST00000635659 CFAP70Q5T0N1 1121 aa11.4□□□□□ -0.58
SMARCA2-244ENST00000635659 HELBQ8NG08 1087 aaPredicted RBP11.4□□□□□ -0.58
SMARCA2-244ENST00000635659 PCDHGC3Q9UN70 934 aa11.4□□□□□ -0.58
SMARCA2-244ENST00000635659 CTDSPL2Q05D32 466 aa11.39□□□□□ -0.59
SMARCA2-244ENST00000635659 RGS22Q8NE09 1264 aa11.39□□□□□ -0.59
SMARCA2-244ENST00000635659 MTMR2Q13614 643 aa11.38□□□□□ -0.59
SMARCA2-244ENST00000635659 PROX2Q3B8N5 592 aa11.38□□□□□ -0.59
SMARCA2-244ENST00000635659 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.37□□□□□ -0.59
SMARCA2-244ENST00000635659 BRD1O95696 1058 aa11.37□□□□□ -0.59
SMARCA2-244ENST00000635659 MFAP1P55081 439 aaKnown RBP11.37□□□□□ -0.59
SMARCA2-244ENST00000635659 SRPK2P78362 688 aaKnown RBP11.37□□□□□ -0.59
SMARCA2-244ENST00000635659 KCNA1Q09470 495 aa11.37□□□□□ -0.59
SMARCA2-244ENST00000635659 PPP1R12CQ9BZL4 782 aa11.37□□□□□ -0.59
SMARCA2-244ENST00000635659 CSB-PGBD3P0DP91 1061 aa11.36□□□□□ -0.59
SMARCA2-244ENST00000635659 GUCA2AQ02747 115 aa11.36□□□□□ -0.59
SMARCA2-244ENST00000635659 SLC10A3P09131 477 aa11.35□□□□□ -0.59
SMARCA2-244ENST00000635659 RFX1P22670 979 aa11.35□□□□□ -0.59
SMARCA2-244ENST00000635659 VAC14Q08AM6 782 aa11.35□□□□□ -0.59
SMARCA2-244ENST00000635659 KIF27Q86VH2 1401 aa11.35□□□□□ -0.59
SMARCA2-244ENST00000635659 HLA-CQ95604 372 aa11.34□□□□□ -0.59
SMARCA2-244ENST00000635659 ALG2Q9H553 416 aa11.34□□□□□ -0.59
SMARCA2-244ENST00000635659 SOX11P35716 441 aa11.33□□□□□ -0.6
SMARCA2-244ENST00000635659 SWT1Q5T5J6 900 aaKnown RBP11.33□□□□□ -0.6
SMARCA2-244ENST00000635659 CYB5RLQ6IPT4 315 aa11.33□□□□□ -0.6
SMARCA2-244ENST00000635659 LRRN4Q8WUT4 740 aa11.33□□□□□ -0.6
SMARCA2-244ENST00000635659 CFAP99D6REC4 459 aa11.32□□□□□ -0.6
SMARCA2-244ENST00000635659 POTEJP0CG39 1038 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms