RNA–Protein interactions for RNA: ENST00000635397.1

SMARCA2-241, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 4

Gene SMARCA2, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-241ENST00000635397 C6orf229H3BNL8 230 aa10.27□□□□□ -0.77
SMARCA2-241ENST00000635397 NECTIN2Q92692 538 aa10.27□□□□□ -0.77
SMARCA2-241ENST00000635397 STAC3Q96MF2 364 aa10.27□□□□□ -0.77
SMARCA2-241ENST00000635397 GDPD2Q9HCC8 539 aa10.27□□□□□ -0.77
SMARCA2-241ENST00000635397 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.27□□□□□ -0.77
SMARCA2-241ENST00000635397 SOCS7O14512 581 aa10.26□□□□□ -0.77
SMARCA2-241ENST00000635397 GOLGA8CPA6NN73 597 aa10.25□□□□□ -0.77
SMARCA2-241ENST00000635397 HELBQ8NG08 1087 aaPredicted RBP10.25□□□□□ -0.77
SMARCA2-241ENST00000635397 TSC1Q92574 1164 aa10.25□□□□□ -0.77
SMARCA2-241ENST00000635397 HRO43593 1189 aa10.24□□□□□ -0.77
SMARCA2-241ENST00000635397 WWC1Q8IX03 1113 aa10.24□□□□□ -0.77
SMARCA2-241ENST00000635397 CCDC82Q8N4S0 544 aa10.24□□□□□ -0.77
SMARCA2-241ENST00000635397 ZNF330Q9Y3S2 320 aaPredicted RBP10.24□□□□□ -0.77
SMARCA2-241ENST00000635397 ABL2P42684 1182 aa10.23□□□□□ -0.77
SMARCA2-241ENST00000635397 CTDSPL2Q05D32 466 aa10.23□□□□□ -0.77
SMARCA2-241ENST00000635397 ANKRD13DQ6ZTN6 518 aa10.23□□□□□ -0.77
SMARCA2-241ENST00000635397 ANKK1Q8NFD2 765 aa10.23□□□□□ -0.77
SMARCA2-241ENST00000635397 ACTN4O43707 911 aaKnown RBP10.22□□□□□ -0.77
SMARCA2-241ENST00000635397 PUS10Q3MIT2 529 aaKnown RBP10.22□□□□□ -0.77
SMARCA2-241ENST00000635397 LCE2DQ5TA82 110 aaPredicted RBP10.22□□□□□ -0.77
SMARCA2-241ENST00000635397 SYMPKQ92797 1274 aaKnown RBP10.22□□□□□ -0.77
SMARCA2-241ENST00000635397 TBC1D2BQ9UPU7 963 aa10.22□□□□□ -0.77
SMARCA2-241ENST00000635397 CFAP99D6REC4 459 aa10.21□□□□□ -0.77
SMARCA2-241ENST00000635397 MORN1Q5T089 497 aa10.21□□□□□ -0.77
SMARCA2-241ENST00000635397 PRR14Q9BWN1 585 aa10.21□□□□□ -0.77
SMARCA2-241ENST00000635397 PPP4CP60510 307 aa10.2□□□□□ -0.78
SMARCA2-241ENST00000635397 PRR7Q8TB68 274 aa10.19□□□□□ -0.78
SMARCA2-241ENST00000635397 GJD4Q96KN9 370 aaPredicted RBP10.19□□□□□ -0.78
SMARCA2-241ENST00000635397 HPS5Q9UPZ3 1129 aa10.19□□□□□ -0.78
SMARCA2-241ENST00000635397 SLC27A5Q9Y2P5 690 aa10.19□□□□□ -0.78
SMARCA2-241ENST00000635397 NDUFB9Q9Y6M9 179 aa10.19□□□□□ -0.78
SMARCA2-241ENST00000635397 SOWAHBA6NEL2 793 aa10.18□□□□□ -0.78
SMARCA2-241ENST00000635397 Q3C1V9 767 aa10.18□□□□□ -0.78
SMARCA2-241ENST00000635397 LRRN4Q8WUT4 740 aa10.18□□□□□ -0.78
SMARCA2-241ENST00000635397 CCDC97Q96F63 343 aaPredicted RBP10.18□□□□□ -0.78
SMARCA2-241ENST00000635397 HMX1Q9NP08 348 aaPredicted RBP10.18□□□□□ -0.78
SMARCA2-241ENST00000635397 BCAMP50895 628 aa10.17□□□□□ -0.78
SMARCA2-241ENST00000635397 RETREG3Q86VR2 466 aa10.17□□□□□ -0.78
SMARCA2-241ENST00000635397 WNT2BQ93097 391 aa10.16□□□□□ -0.78
SMARCA2-241ENST00000635397 PLSCR2Q9NRY7 297 aa10.16□□□□□ -0.78
SMARCA2-241ENST00000635397 TSR3Q9UJK0 312 aaKnown RBP10.16□□□□□ -0.78
SMARCA2-241ENST00000635397 SERPINA10Q9UK55 444 aa10.16□□□□□ -0.78
SMARCA2-241ENST00000635397 TRIM34Q9BYJ4 488 aa10.15□□□□□ -0.78
SMARCA2-241ENST00000635397 APLP1P51693 650 aa10.14□□□□□ -0.79
SMARCA2-241ENST00000635397 PCDHB3Q9Y5E6 796 aa10.13□□□□□ -0.79
SMARCA2-241ENST00000635397 BLOC1S3Q6QNY0 202 aa10.12□□□□□ -0.79
SMARCA2-241ENST00000635397 RNF19BQ6ZMZ0 732 aa10.12□□□□□ -0.79
SMARCA2-241ENST00000635397 POM121CA8CG34 1229 aa10.11□□□□□ -0.79
SMARCA2-241ENST00000635397 IRF5Q13568 498 aa10.11□□□□□ -0.79
SMARCA2-241ENST00000635397 EPS8L1Q8TE68 723 aa10.11□□□□□ -0.79
SMARCA2-241ENST00000635397 CALR3Q96L12 384 aaKnown RBP10.11□□□□□ -0.79
SMARCA2-241ENST00000635397 PER1O15534 1290 aaPredicted RBP10.1□□□□□ -0.79
SMARCA2-241ENST00000635397 NR1I2O75469 434 aa10.1□□□□□ -0.79
SMARCA2-241ENST00000635397 WASHC4Q2M389 1173 aa10.1□□□□□ -0.79
SMARCA2-241ENST00000635397 DESI1Q6ICB0 168 aa10.1□□□□□ -0.79
SMARCA2-241ENST00000635397 BRICD5Q6PL45 260 aa10.1□□□□□ -0.79
SMARCA2-241ENST00000635397 SCUBE3Q8IX30 993 aa10.1□□□□□ -0.79
SMARCA2-241ENST00000635397 USB1Q9BQ65 265 aaKnown RBP10.1□□□□□ -0.79
SMARCA2-241ENST00000635397 FMNL1O95466 1100 aaPredicted RBP10.09□□□□□ -0.79
SMARCA2-241ENST00000635397 NR6A1Q15406 480 aa10.09□□□□□ -0.79
SMARCA2-241ENST00000635397 SALL2Q9Y467 1007 aaPredicted RBP10.09□□□□□ -0.79
SMARCA2-241ENST00000635397 GLMNQ92990 594 aa10.08□□□□□ -0.8
SMARCA2-241ENST00000635397 WBP1LQ9NX94 342 aa10.08□□□□□ -0.8
SMARCA2-241ENST00000635397 GPR37L1O60883 481 aa10.07□□□□□ -0.8
SMARCA2-241ENST00000635397 LYPD8Q6UX82 237 aa10.07□□□□□ -0.8
SMARCA2-241ENST00000635397 THAP11Q96EK4 314 aa10.06□□□□□ -0.8
SMARCA2-241ENST00000635397 KRTAP3-3Q9BYR6 98 aa10.06□□□□□ -0.8
SMARCA2-241ENST00000635397 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
SMARCA2-241ENST00000635397 VAC14Q08AM6 782 aa10.05□□□□□ -0.8
SMARCA2-241ENST00000635397 HDGFL1Q5TGJ6 251 aa10.04□□□□□ -0.8
SMARCA2-241ENST00000635397 THSD4Q6ZMP0 1018 aa10.04□□□□□ -0.8
SMARCA2-241ENST00000635397 PNMA1Q8ND90 353 aa10.04□□□□□ -0.8
SMARCA2-241ENST00000635397 KCTD12Q96CX2 325 aaKnown RBP10.04□□□□□ -0.8
SMARCA2-241ENST00000635397 JUNDP17535 347 aa10.03□□□□□ -0.8
SMARCA2-241ENST00000635397 COPS2P61201 443 aa10.02□□□□□ -0.81
SMARCA2-241ENST00000635397 ADAMTS19Q8TE59 1207 aa10.01□□□□□ -0.81
SMARCA2-241ENST00000635397 PTPRNQ16849 979 aa10□□□□□ -0.81
SMARCA2-241ENST00000635397 SPSB2Q99619 263 aa10□□□□□ -0.81
SMARCA2-241ENST00000635397 F12P00748 615 aaPredicted RBP9.99□□□□□ -0.81
SMARCA2-241ENST00000635397 MSS51Q4VC12 460 aa9.99□□□□□ -0.81
SMARCA2-241ENST00000635397 CTHP32929 405 aa9.98□□□□□ -0.81
SMARCA2-241ENST00000635397 NYAP1Q6ZVC0 841 aa9.98□□□□□ -0.81
SMARCA2-241ENST00000635397 MAP10Q9P2G4 905 aa9.98□□□□□ -0.81
SMARCA2-241ENST00000635397 PDIA4P13667 645 aaKnown RBP9.97□□□□□ -0.81
SMARCA2-241ENST00000635397 SOX11P35716 441 aa9.97□□□□□ -0.81
SMARCA2-241ENST00000635397 FAM160A2Q8N612 972 aaPredicted RBP9.97□□□□□ -0.81
SMARCA2-241ENST00000635397 ALG2Q9H553 416 aa9.97□□□□□ -0.81
SMARCA2-241ENST00000635397 FKBPLQ9UIM3 349 aa9.97□□□□□ -0.81
SMARCA2-241ENST00000635397 SEMA3FQ13275 785 aa9.96□□□□□ -0.82
SMARCA2-241ENST00000635397 DXOO77932 396 aaKnown RBP9.95□□□□□ -0.82
SMARCA2-241ENST00000635397 CCNYL3P0C7X3 344 aa9.95□□□□□ -0.82
SMARCA2-241ENST00000635397 PTPN5P54829 565 aa9.95□□□□□ -0.82
SMARCA2-241ENST00000635397 NR1H3Q13133 447 aa9.95□□□□□ -0.82
SMARCA2-241ENST00000635397 NUDT12Q9BQG2 462 aa9.95□□□□□ -0.82
SMARCA2-241ENST00000635397 ZC3H4Q9UPT8 1303 aaKnown RBP9.94□□□□□ -0.82
SMARCA2-241ENST00000635397 TLL1O43897 1013 aa9.94□□□□□ -0.82
SMARCA2-241ENST00000635397 ZPR1O75312 459 aa9.94□□□□□ -0.82
SMARCA2-241ENST00000635397 MMP16P51512 607 aa9.94□□□□□ -0.82
SMARCA2-241ENST00000635397 EIF4G2P78344 907 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMARCA2-241ENST00000635397 MTRQ99707 1265 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms