RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 SAMD7Q7Z3H4 446 aa11.47□□□□□ -0.57
SMARCA2-240ENST00000635392 GJD4Q96KN9 370 aaPredicted RBP11.47□□□□□ -0.57
SMARCA2-240ENST00000635392 HCSTQ9UBK5 93 aa11.47□□□□□ -0.57
SMARCA2-240ENST00000635392 SLF2Q8IX21 1173 aa11.46□□□□□ -0.57
SMARCA2-240ENST00000635392 HDGFP51858 240 aaKnown RBP11.44□□□□□ -0.58
SMARCA2-240ENST00000635392 FUT2Q10981 343 aa11.44□□□□□ -0.58
SMARCA2-240ENST00000635392 TBC1D2BQ9UPU7 963 aa11.44□□□□□ -0.58
SMARCA2-240ENST00000635392 ZNF330Q9Y3S2 320 aaPredicted RBP11.44□□□□□ -0.58
SMARCA2-240ENST00000635392 TK2O00142 265 aa11.43□□□□□ -0.58
SMARCA2-240ENST00000635392 HRO43593 1189 aa11.43□□□□□ -0.58
SMARCA2-240ENST00000635392 GPR37L1O60883 481 aa11.43□□□□□ -0.58
SMARCA2-240ENST00000635392 CTDSPL2Q05D32 466 aa11.43□□□□□ -0.58
SMARCA2-240ENST00000635392 CFHP08603 1231 aa11.42□□□□□ -0.58
SMARCA2-240ENST00000635392 MTMR2Q13614 643 aa11.42□□□□□ -0.58
SMARCA2-240ENST00000635392 ZFRQ96KR1 1074 aaKnown RBP11.42□□□□□ -0.58
SMARCA2-240ENST00000635392 CFAP99D6REC4 459 aa11.41□□□□□ -0.58
SMARCA2-240ENST00000635392 TRIM34Q9BYJ4 488 aa11.41□□□□□ -0.58
SMARCA2-240ENST00000635392 HMX1Q9NP08 348 aaPredicted RBP11.41□□□□□ -0.58
SMARCA2-240ENST00000635392 ATP6V1AP38606 617 aa11.4□□□□□ -0.58
SMARCA2-240ENST00000635392 IRF5Q13568 498 aa11.4□□□□□ -0.58
SMARCA2-240ENST00000635392 NBPF3Q9H094 633 aa11.4□□□□□ -0.58
SMARCA2-240ENST00000635392 SERPINA10Q9UK55 444 aa11.4□□□□□ -0.58
SMARCA2-240ENST00000635392 ABL2P42684 1182 aa11.39□□□□□ -0.59
SMARCA2-240ENST00000635392 POM121CA8CG34 1229 aa11.37□□□□□ -0.59
SMARCA2-240ENST00000635392 SLC4A3P48751 1232 aa11.37□□□□□ -0.59
SMARCA2-240ENST00000635392 GRIPAP1Q4V328 841 aa11.37□□□□□ -0.59
SMARCA2-240ENST00000635392 MORN1Q5T089 497 aa11.37□□□□□ -0.59
SMARCA2-240ENST00000635392 SYMPKQ92797 1274 aaKnown RBP11.37□□□□□ -0.59
SMARCA2-240ENST00000635392 LRRN4Q8WUT4 740 aa11.36□□□□□ -0.59
SMARCA2-240ENST00000635392 ACTN4O43707 911 aaKnown RBP11.35□□□□□ -0.59
SMARCA2-240ENST00000635392 PRM3Q9NNZ6 103 aa11.35□□□□□ -0.59
SMARCA2-240ENST00000635392 NDUFB9Q9Y6M9 179 aa11.35□□□□□ -0.59
SMARCA2-240ENST00000635392 C6orf229H3BNL8 230 aa11.34□□□□□ -0.59
SMARCA2-240ENST00000635392 MRPL50Q8N5N7 158 aaKnown RBP11.34□□□□□ -0.59
SMARCA2-240ENST00000635392 KCTD12Q96CX2 325 aaKnown RBP11.34□□□□□ -0.59
SMARCA2-240ENST00000635392 CCDC97Q96F63 343 aaPredicted RBP11.34□□□□□ -0.59
SMARCA2-240ENST00000635392 HELBQ8NG08 1087 aaPredicted RBP11.33□□□□□ -0.6
SMARCA2-240ENST00000635392 KMT5BQ4FZB7 885 aa11.32□□□□□ -0.6
SMARCA2-240ENST00000635392 EPS8L1Q8TE68 723 aa11.32□□□□□ -0.6
SMARCA2-240ENST00000635392 SLC27A5Q9Y2P5 690 aa11.32□□□□□ -0.6
SMARCA2-240ENST00000635392 PUS10Q3MIT2 529 aaKnown RBP11.31□□□□□ -0.6
SMARCA2-240ENST00000635392 WWC1Q8IX03 1113 aa11.31□□□□□ -0.6
SMARCA2-240ENST00000635392 PRR7Q8TB68 274 aa11.31□□□□□ -0.6
SMARCA2-240ENST00000635392 ADAMTS19Q8TE59 1207 aa11.31□□□□□ -0.6
SMARCA2-240ENST00000635392 LRCH3Q96II8 777 aa11.31□□□□□ -0.6
SMARCA2-240ENST00000635392 RNF40O75150 1001 aa11.3□□□□□ -0.6
SMARCA2-240ENST00000635392 GLMNQ92990 594 aa11.3□□□□□ -0.6
SMARCA2-240ENST00000635392 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.3□□□□□ -0.6
SMARCA2-240ENST00000635392 PER1O15534 1290 aaPredicted RBP11.29□□□□□ -0.6
SMARCA2-240ENST00000635392 TRIM26Q12899 539 aaPredicted RBP11.29□□□□□ -0.6
SMARCA2-240ENST00000635392 RETREG3Q86VR2 466 aa11.29□□□□□ -0.6
SMARCA2-240ENST00000635392 DESI1Q6ICB0 168 aa11.28□□□□□ -0.6
SMARCA2-240ENST00000635392 CALR3Q96L12 384 aaKnown RBP11.28□□□□□ -0.6
SMARCA2-240ENST00000635392 TSC1Q92574 1164 aa11.27□□□□□ -0.61
SMARCA2-240ENST00000635392 SOWAHBA6NEL2 793 aa11.26□□□□□ -0.61
SMARCA2-240ENST00000635392 WASHC4Q2M389 1173 aa11.26□□□□□ -0.61
SMARCA2-240ENST00000635392 NECTIN2Q92692 538 aa11.26□□□□□ -0.61
SMARCA2-240ENST00000635392 STAC3Q96MF2 364 aa11.26□□□□□ -0.61
SMARCA2-240ENST00000635392 APLP1P51693 650 aa11.25□□□□□ -0.61
SMARCA2-240ENST00000635392 NR6A1Q15406 480 aa11.25□□□□□ -0.61
SMARCA2-240ENST00000635392 Q3C1V9 767 aa11.25□□□□□ -0.61
SMARCA2-240ENST00000635392 HDGFL1Q5TGJ6 251 aa11.25□□□□□ -0.61
SMARCA2-240ENST00000635392 BRICD5Q6PL45 260 aa11.25□□□□□ -0.61
SMARCA2-240ENST00000635392 BLOC1S3Q6QNY0 202 aa11.25□□□□□ -0.61
SMARCA2-240ENST00000635392 RNF19BQ6ZMZ0 732 aa11.25□□□□□ -0.61
SMARCA2-240ENST00000635392 SALL2Q9Y467 1007 aaPredicted RBP11.25□□□□□ -0.61
SMARCA2-240ENST00000635392 LYPD8Q6UX82 237 aa11.24□□□□□ -0.61
SMARCA2-240ENST00000635392 THAP11Q96EK4 314 aa11.24□□□□□ -0.61
SMARCA2-240ENST00000635392 ALG2Q9H553 416 aa11.23□□□□□ -0.61
SMARCA2-240ENST00000635392 PDIA4P13667 645 aaKnown RBP11.22□□□□□ -0.61
SMARCA2-240ENST00000635392 BCAMP50895 628 aa11.22□□□□□ -0.61
SMARCA2-240ENST00000635392 VAC14Q08AM6 782 aa11.22□□□□□ -0.61
SMARCA2-240ENST00000635392 ANKK1Q8NFD2 765 aa11.22□□□□□ -0.61
SMARCA2-240ENST00000635392 PRR14Q9BWN1 585 aa11.22□□□□□ -0.61
SMARCA2-240ENST00000635392 PTPN5P54829 565 aa11.21□□□□□ -0.61
SMARCA2-240ENST00000635392 PPP4CP60510 307 aa11.21□□□□□ -0.61
SMARCA2-240ENST00000635392 SCUBE3Q8IX30 993 aa11.21□□□□□ -0.61
SMARCA2-240ENST00000635392 HPS5Q9UPZ3 1129 aa11.21□□□□□ -0.61
SMARCA2-240ENST00000635392 USB1Q9BQ65 265 aaKnown RBP11.2□□□□□ -0.62
SMARCA2-240ENST00000635392 TSR3Q9UJK0 312 aaKnown RBP11.2□□□□□ -0.62
SMARCA2-240ENST00000635392 SRPK2P78362 688 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-240ENST00000635392 TRAIPQ9BWF2 469 aa11.19□□□□□ -0.62
SMARCA2-240ENST00000635392 PODXL2Q9NZ53 605 aa11.19□□□□□ -0.62
SMARCA2-240ENST00000635392 PPP1R15AO75807 674 aaPredicted RBP11.18□□□□□ -0.62
SMARCA2-240ENST00000635392 CFAP70Q5T0N1 1121 aa11.17□□□□□ -0.62
SMARCA2-240ENST00000635392 F12P00748 615 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-240ENST00000635392 GOLGA8CPA6NN73 597 aa11.15□□□□□ -0.62
SMARCA2-240ENST00000635392 WNT2BQ93097 391 aa11.15□□□□□ -0.62
SMARCA2-240ENST00000635392 UCN2Q96RP3 112 aa11.15□□□□□ -0.62
SMARCA2-240ENST00000635392 PCDHB3Q9Y5E6 796 aa11.15□□□□□ -0.62
SMARCA2-240ENST00000635392 NR1I2O75469 434 aa11.14□□□□□ -0.63
SMARCA2-240ENST00000635392 FMNL1O95466 1100 aaPredicted RBP11.14□□□□□ -0.63
SMARCA2-240ENST00000635392 THSD4Q6ZMP0 1018 aa11.14□□□□□ -0.63
SMARCA2-240ENST00000635392 RETREG2Q8NC44 543 aa11.14□□□□□ -0.63
SMARCA2-240ENST00000635392 PPP1R12CQ9BZL4 782 aa11.14□□□□□ -0.63
SMARCA2-240ENST00000635392 WBP1LQ9NX94 342 aa11.14□□□□□ -0.63
SMARCA2-240ENST00000635392 JUNDP17535 347 aa11.12□□□□□ -0.63
SMARCA2-240ENST00000635392 SOX11P35716 441 aa11.12□□□□□ -0.63
SMARCA2-240ENST00000635392 FAM160A2Q8N612 972 aaPredicted RBP11.12□□□□□ -0.63
SMARCA2-240ENST00000635392 PALM3A6NDB9 673 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms