RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 TECPR2O15040 1411 aa13.96□□□□□ -0.18
FOXCUT-201ENST00000628509 NINLQ9Y2I6 1382 aa13.96□□□□□ -0.18
FOXCUT-201ENST00000628509 SETD1AO15047 1707 aaKnown RBP13.95□□□□□ -0.18
FOXCUT-201ENST00000628509 KDM4FA0A1W2PPD8 638 aa13.95□□□□□ -0.18
FOXCUT-201ENST00000628509 NPHP4O75161 1426 aaPredicted RBP13.95□□□□□ -0.18
FOXCUT-201ENST00000628509 ADAMTS13Q76LX8 1427 aa13.95□□□□□ -0.18
FOXCUT-201ENST00000628509 CPS1P31327 1500 aa13.94□□□□□ -0.18
FOXCUT-201ENST00000628509 PRAM1Q96QH2 718 aa13.93□□□□□ -0.18
FOXCUT-201ENST00000628509 ATAD2Q6PL18 1390 aa13.93□□□□□ -0.18
FOXCUT-201ENST00000628509 ASXL1Q8IXJ9 1541 aa13.92□□□□□ -0.18
FOXCUT-201ENST00000628509 SLC26A8Q96RN1 970 aa13.92□□□□□ -0.18
FOXCUT-201ENST00000628509 PTCH1Q13635 1447 aa13.91□□□□□ -0.18
FOXCUT-201ENST00000628509 METP08581 1390 aa13.91□□□□□ -0.18
FOXCUT-201ENST00000628509 KTN1Q86UP2 1357 aaKnown RBP13.91□□□□□ -0.18
FOXCUT-201ENST00000628509 CAPN15O75808 1086 aa13.9□□□□□ -0.18
FOXCUT-201ENST00000628509 SRPK2P78362 688 aaKnown RBP13.89□□□□□ -0.19
FOXCUT-201ENST00000628509 AMOTL2Q9Y2J4 779 aa13.89□□□□□ -0.19
FOXCUT-201ENST00000628509 DISP3Q9P2K9 1392 aa13.88□□□□□ -0.19
FOXCUT-201ENST00000628509 C11orf95C9JLR9 678 aaPredicted RBP13.87□□□□□ -0.19
FOXCUT-201ENST00000628509 KCNA6P17658 529 aa13.86□□□□□ -0.19
FOXCUT-201ENST00000628509 TERF2IPQ9NYB0 399 aa13.86□□□□□ -0.19
FOXCUT-201ENST00000628509 KNSTRNQ9Y448 316 aa13.86□□□□□ -0.19
FOXCUT-201ENST00000628509 MINK1Q8N4C8 1332 aaPredicted RBP13.86□□□□□ -0.19
FOXCUT-201ENST00000628509 LMTK3Q96Q04 1460 aa13.86□□□□□ -0.19
FOXCUT-201ENST00000628509 CHD2O14647 1828 aaKnown RBP13.85□□□□□ -0.19
FOXCUT-201ENST00000628509 XRN1Q8IZH2 1706 aaKnown RBP13.85□□□□□ -0.19
FOXCUT-201ENST00000628509 SAFB2Q14151 953 aaKnown RBP eCLIP13.85□□□□□ -0.19
FOXCUT-201ENST00000628509 SPINK5Q9NQ38 1064 aaPredicted RBP13.85□□□□□ -0.19
FOXCUT-201ENST00000628509 NCKAP5LQ9HCH0 1330 aa13.85□□□□□ -0.19
FOXCUT-201ENST00000628509 ADGRB2O60241 1585 aa13.84□□□□□ -0.19
FOXCUT-201ENST00000628509 NKTRP30414 1462 aaKnown RBP13.84□□□□□ -0.19
FOXCUT-201ENST00000628509 WASLO00401 505 aaPredicted RBP13.83□□□□□ -0.2
FOXCUT-201ENST00000628509 RALBP1Q15311 655 aa13.83□□□□□ -0.2
FOXCUT-201ENST00000628509 HDGFL2Q7Z4V5 671 aaPredicted RBP13.83□□□□□ -0.2
FOXCUT-201ENST00000628509 TMC1Q8TDI8 760 aa13.83□□□□□ -0.2
FOXCUT-201ENST00000628509 NCOA3Q9Y6Q9 1424 aa13.82□□□□□ -0.2
FOXCUT-201ENST00000628509 CCER2I3L3R5 266 aa13.82□□□□□ -0.2
FOXCUT-201ENST00000628509 WAPLQ7Z5K2 1190 aa13.82□□□□□ -0.2
FOXCUT-201ENST00000628509 CDK19Q9BWU1 502 aa13.82□□□□□ -0.2
FOXCUT-201ENST00000628509 ROBO2Q9HCK4 1378 aa13.82□□□□□ -0.2
FOXCUT-201ENST00000628509 NWD1Q149M9 1564 aa13.81□□□□□ -0.2
FOXCUT-201ENST00000628509 DSG3P32926 999 aa13.81□□□□□ -0.2
FOXCUT-201ENST00000628509 PANK3Q9H999 370 aa13.81□□□□□ -0.2
FOXCUT-201ENST00000628509 TULP4Q9NRJ4 1543 aa13.8□□□□□ -0.2
FOXCUT-201ENST00000628509 C14orf37Q86TY3 774 aa13.8□□□□□ -0.2
FOXCUT-201ENST00000628509 ANKRD36BQ8N2N9 1353 aa13.8□□□□□ -0.2
FOXCUT-201ENST00000628509 PTPRUQ92729 1446 aa13.8□□□□□ -0.2
FOXCUT-201ENST00000628509 KCNA4P22459 653 aa13.79□□□□□ -0.2
FOXCUT-201ENST00000628509 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
FOXCUT-201ENST00000628509 CCDC61Q9Y6R9 512 aa13.79□□□□□ -0.2
FOXCUT-201ENST00000628509 NPC1L1Q9UHC9 1359 aa13.79□□□□□ -0.2
FOXCUT-201ENST00000628509 HSPA2P54652 639 aa13.78□□□□□ -0.2
FOXCUT-201ENST00000628509 MIER1Q8N108 512 aa13.78□□□□□ -0.2
FOXCUT-201ENST00000628509 CABP2Q9NPB3 220 aa13.78□□□□□ -0.2
FOXCUT-201ENST00000628509 NSD2O96028 1365 aa13.78□□□□□ -0.2
FOXCUT-201ENST00000628509 ANKARQ7Z5J8 1434 aa13.78□□□□□ -0.2
FOXCUT-201ENST00000628509 ATP7BP35670 1465 aa13.78□□□□□ -0.2
FOXCUT-201ENST00000628509 ITSN1Q15811 1721 aa13.78□□□□□ -0.2
FOXCUT-201ENST00000628509 MYOM1P52179 1685 aa13.77□□□□□ -0.21
FOXCUT-201ENST00000628509 CGNL1Q0VF96 1302 aa13.77□□□□□ -0.21
FOXCUT-201ENST00000628509 PROSER2Q86WR7 435 aaPredicted RBP13.77□□□□□ -0.21
FOXCUT-201ENST00000628509 PLEKHH1Q9ULM0 1364 aa13.77□□□□□ -0.21
FOXCUT-201ENST00000628509 PRKRIP1Q9H875 184 aaPredicted RBP13.76□□□□□ -0.21
FOXCUT-201ENST00000628509 CDC42BPGQ6DT37 1551 aa13.75□□□□□ -0.21
FOXCUT-201ENST00000628509 ADGRL3Q9HAR2 1447 aa13.75□□□□□ -0.21
FOXCUT-201ENST00000628509 NUDT16Q96DE0 195 aaKnown RBP13.75□□□□□ -0.21
FOXCUT-201ENST00000628509 USP32Q8NFA0 1604 aa13.74□□□□□ -0.21
FOXCUT-201ENST00000628509 DCCP43146 1447 aa13.73□□□□□ -0.21
FOXCUT-201ENST00000628509 PPIP5K1Q6PFW1 1433 aa13.73□□□□□ -0.21
FOXCUT-201ENST00000628509 STRCQ7RTU9 1775 aa13.73□□□□□ -0.21
FOXCUT-201ENST00000628509 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.73□□□□□ -0.21
FOXCUT-201ENST00000628509 BRD4O60885 1362 aaPredicted RBP13.73□□□□□ -0.21
FOXCUT-201ENST00000628509 PER1O15534 1290 aaPredicted RBP13.73□□□□□ -0.21
FOXCUT-201ENST00000628509 SLC12A5Q9H2X9 1139 aa13.73□□□□□ -0.21
FOXCUT-201ENST00000628509 C19orf44Q9H6X5 657 aa13.73□□□□□ -0.21
FOXCUT-201ENST00000628509 MYBBP1AQ9BQG0 1328 aaKnown RBP13.72□□□□□ -0.21
FOXCUT-201ENST00000628509 ATF3P18847 181 aa13.72□□□□□ -0.21
FOXCUT-201ENST00000628509 CABP1Q9NZU7 370 aa13.72□□□□□ -0.21
FOXCUT-201ENST00000628509 MSH6P52701 1360 aa13.71□□□□□ -0.21
FOXCUT-201ENST00000628509 CADPS2Q86UW7 1296 aa13.71□□□□□ -0.21
FOXCUT-201ENST00000628509 NSD3Q9BZ95 1437 aa13.71□□□□□ -0.22
FOXCUT-201ENST00000628509 PLEKHG3A1L390 1219 aa13.7□□□□□ -0.22
FOXCUT-201ENST00000628509 NLRP13Q86W25 1043 aa13.7□□□□□ -0.22
FOXCUT-201ENST00000628509 FMN2Q9NZ56 1722 aa13.7□□□□□ -0.22
FOXCUT-201ENST00000628509 EDC4Q6P2E9 1401 aaKnown RBP13.69□□□□□ -0.22
FOXCUT-201ENST00000628509 A0A1W2PP64 1363 aa13.69□□□□□ -0.22
FOXCUT-201ENST00000628509 PARD3Q8TEW0 1356 aa13.69□□□□□ -0.22
FOXCUT-201ENST00000628509 NALCNQ8IZF0 1738 aa13.68□□□□□ -0.22
FOXCUT-201ENST00000628509 NGDNQ8NEJ9 315 aaKnown RBP13.68□□□□□ -0.22
FOXCUT-201ENST00000628509 TOPAZ1Q8N9V7 1692 aa13.67□□□□□ -0.22
FOXCUT-201ENST00000628509 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
FOXCUT-201ENST00000628509 AMER1Q5JTC6 1135 aaPredicted RBP13.67□□□□□ -0.22
FOXCUT-201ENST00000628509 CC2D1BQ5T0F9 858 aaKnown RBP13.67□□□□□ -0.22
FOXCUT-201ENST00000628509 MORC1Q86VD1 984 aa13.67□□□□□ -0.22
FOXCUT-201ENST00000628509 TTC21AQ8NDW8 1320 aa13.66□□□□□ -0.22
FOXCUT-201ENST00000628509 CPSF1Q10570 1443 aaKnown RBP13.66□□□□□ -0.22
FOXCUT-201ENST00000628509 MRS2Q9HD23 443 aa13.66□□□□□ -0.22
FOXCUT-201ENST00000628509 TMEM94Q12767 1356 aa13.66□□□□□ -0.22
FOXCUT-201ENST00000628509 CFAP53Q96M91 514 aa13.65□□□□□ -0.22
FOXCUT-201ENST00000628509 KIF1AQ12756 1690 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms