RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 LOC105371045A0A1W2PR82 267 aa13.45□□□□□ -0.26
TCF4-258ENST00000627320 PTCH1Q13635 1447 aa13.45□□□□□ -0.26
TCF4-258ENST00000627320 ABCA3Q99758 1704 aa13.44□□□□□ -0.26
TCF4-258ENST00000627320 RALGAPBQ86X10 1494 aa13.44□□□□□ -0.26
TCF4-258ENST00000627320 FNBP4Q8N3X1 1017 aaPredicted RBP13.44□□□□□ -0.26
TCF4-258ENST00000627320 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.44□□□□□ -0.26
TCF4-258ENST00000627320 RGPD8O14715 1765 aaPredicted RBP13.44□□□□□ -0.26
TCF4-258ENST00000627320 SOS2Q07890 1332 aaPredicted RBP13.43□□□□□ -0.26
TCF4-258ENST00000627320 PXDNQ92626 1479 aa13.42□□□□□ -0.26
TCF4-258ENST00000627320 BLMP54132 1417 aaPredicted RBP13.42□□□□□ -0.26
TCF4-258ENST00000627320 ROBO2Q9HCK4 1378 aa13.41□□□□□ -0.26
TCF4-258ENST00000627320 TNS1Q9HBL0 1735 aaKnown RBP13.41□□□□□ -0.26
TCF4-258ENST00000627320 USP32Q8NFA0 1604 aa13.4□□□□□ -0.26
TCF4-258ENST00000627320 HDGFP51858 240 aaKnown RBP13.4□□□□□ -0.26
TCF4-258ENST00000627320 GJD4Q96KN9 370 aaPredicted RBP13.4□□□□□ -0.26
TCF4-258ENST00000627320 KIF1BO60333 1816 aa13.4□□□□□ -0.26
TCF4-258ENST00000627320 PLEKHG5O94827 1062 aa13.39□□□□□ -0.27
TCF4-258ENST00000627320 NRAPQ86VF7 1730 aa13.37□□□□□ -0.27
TCF4-258ENST00000627320 HRCP23327 699 aa13.37□□□□□ -0.27
TCF4-258ENST00000627320 FAM50AQ14320 339 aaKnown RBP13.37□□□□□ -0.27
TCF4-258ENST00000627320 SLIT2O94813 1529 aa13.37□□□□□ -0.27
TCF4-258ENST00000627320 CAMTA1Q9Y6Y1 1673 aa13.37□□□□□ -0.27
TCF4-258ENST00000627320 NUTM2FA1L443 756 aa13.36□□□□□ -0.27
TCF4-258ENST00000627320 RGPD1P0DJD0 1748 aa13.36□□□□□ -0.27
TCF4-258ENST00000627320 ZNF326Q5BKZ1 582 aaKnown RBP13.35□□□□□ -0.27
TCF4-258ENST00000627320 PPLO60437 1756 aa13.35□□□□□ -0.27
TCF4-258ENST00000627320 CDC42BPGQ6DT37 1551 aa13.34□□□□□ -0.27
TCF4-258ENST00000627320 FAM182BQ5T319 152 aa13.34□□□□□ -0.27
TCF4-258ENST00000627320 CCDC125Q86Z20 511 aa13.34□□□□□ -0.27
TCF4-258ENST00000627320 FMN2Q9NZ56 1722 aa13.33□□□□□ -0.27
TCF4-258ENST00000627320 NWD2Q9ULI1 1742 aa13.33□□□□□ -0.27
TCF4-258ENST00000627320 NCBP3Q53F19 620 aaKnown RBP13.33□□□□□ -0.28
TCF4-258ENST00000627320 SEPT12Q8IYM1 358 aa13.33□□□□□ -0.28
TCF4-258ENST00000627320 IFT172Q9UG01 1749 aa13.33□□□□□ -0.28
TCF4-258ENST00000627320 FOXO3O43524 673 aa13.31□□□□□ -0.28
TCF4-258ENST00000627320 NUP155O75694 1391 aa13.31□□□□□ -0.28
TCF4-258ENST00000627320 R3HDM1Q15032 1099 aaKnown RBP13.3□□□□□ -0.28
TCF4-258ENST00000627320 ESCO1Q5FWF5 840 aa13.3□□□□□ -0.28
TCF4-258ENST00000627320 UNC5CLQ8IV45 518 aa13.3□□□□□ -0.28
TCF4-258ENST00000627320 CABLES1Q8TDN4 633 aa13.3□□□□□ -0.28
TCF4-258ENST00000627320 NUP188Q5SRE5 1749 aa13.3□□□□□ -0.28
TCF4-258ENST00000627320 EN1Q05925 392 aaPredicted RBP13.29□□□□□ -0.28
TCF4-258ENST00000627320 RREB1Q92766 1687 aa13.28□□□□□ -0.28
TCF4-258ENST00000627320 PLEKHH1Q9ULM0 1364 aa13.27□□□□□ -0.29
TCF4-258ENST00000627320 KIF1AQ12756 1690 aa13.27□□□□□ -0.29
TCF4-258ENST00000627320 NAIPQ13075 1403 aa13.26□□□□□ -0.29
TCF4-258ENST00000627320 SF3B2Q13435 895 aaKnown RBP13.26□□□□□ -0.29
TCF4-258ENST00000627320 NPHP3Q7Z494 1330 aa13.25□□□□□ -0.29
TCF4-258ENST00000627320 NPM3O75607 178 aaKnown RBP13.25□□□□□ -0.29
TCF4-258ENST00000627320 YY1P25490 414 aa13.25□□□□□ -0.29
TCF4-258ENST00000627320 KRT27Q7Z3Y8 459 aa13.25□□□□□ -0.29
TCF4-258ENST00000627320 CCDC9Q9Y3X0 531 aaKnown RBP13.25□□□□□ -0.29
TCF4-258ENST00000627320 CRYBG1Q9Y4K1 1723 aa13.25□□□□□ -0.29
TCF4-258ENST00000627320 THSD7AQ9UPZ6 1657 aa13.24□□□□□ -0.29
TCF4-258ENST00000627320 ITGAEP38570 1179 aa13.24□□□□□ -0.29
TCF4-258ENST00000627320 KNDC1Q76NI1 1749 aa13.24□□□□□ -0.29
TCF4-258ENST00000627320 PRAG1Q86YV5 1406 aa13.23□□□□□ -0.29
TCF4-258ENST00000627320 A0A0G2JS52 829 aa13.23□□□□□ -0.29
TCF4-258ENST00000627320 MYT1Q01538 1121 aa13.23□□□□□ -0.29
TCF4-258ENST00000627320 EZH2Q15910 746 aaKnown RBP13.23□□□□□ -0.29
TCF4-258ENST00000627320 WAPLQ7Z5K2 1190 aa13.23□□□□□ -0.29
TCF4-258ENST00000627320 TRPM3Q9HCF6 1732 aaPredicted RBP13.22□□□□□ -0.29
TCF4-258ENST00000627320 SPATA31A3Q5VYP0 1347 aa13.22□□□□□ -0.29
TCF4-258ENST00000627320 FAM98CQ17RN3 349 aaKnown RBP13.22□□□□□ -0.29
TCF4-258ENST00000627320 CNKSR2Q8WXI2 1034 aa13.22□□□□□ -0.29
TCF4-258ENST00000627320 HFM1A2PYH4 1435 aa13.22□□□□□ -0.29
TCF4-258ENST00000627320 BAG6P46379 1132 aa13.21□□□□□ -0.29
TCF4-258ENST00000627320 MAPK8IP2Q13387 824 aaPredicted RBP13.21□□□□□ -0.29
TCF4-258ENST00000627320 VPS72Q15906 364 aa13.21□□□□□ -0.29
TCF4-258ENST00000627320 APLP2Q06481 763 aa13.19□□□□□ -0.3
TCF4-258ENST00000627320 STK26Q9P289 416 aa13.19□□□□□ -0.3
TCF4-258ENST00000627320 TNS3Q68CZ2 1445 aa13.19□□□□□ -0.3
TCF4-258ENST00000627320 ALS2Q96Q42 1657 aa13.18□□□□□ -0.3
TCF4-258ENST00000627320 COL14A1Q05707 1796 aaKnown RBP13.18□□□□□ -0.3
TCF4-258ENST00000627320 ROCK1Q13464 1354 aa13.18□□□□□ -0.3
TCF4-258ENST00000627320 FAM83GA6ND36 823 aa13.17□□□□□ -0.3
TCF4-258ENST00000627320 ONECUT3O60422 494 aaPredicted RBP13.17□□□□□ -0.3
TCF4-258ENST00000627320 KRT28Q7Z3Y7 464 aa13.17□□□□□ -0.3
TCF4-258ENST00000627320 MYOM1P52179 1685 aa13.15□□□□□ -0.3
TCF4-258ENST00000627320 CCDC144AA2RUR9 1427 aa13.15□□□□□ -0.3
TCF4-258ENST00000627320 HAP1P54257 671 aaPredicted RBP13.15□□□□□ -0.3
TCF4-258ENST00000627320 LMOD2Q6P5Q4 547 aa13.15□□□□□ -0.3
TCF4-258ENST00000627320 ADGRB2O60241 1585 aa13.15□□□□□ -0.3
TCF4-258ENST00000627320 ADGRF5Q8IZF2 1346 aa13.14□□□□□ -0.31
TCF4-258ENST00000627320 DISP2A7MBM2 1401 aa13.14□□□□□ -0.31
TCF4-258ENST00000627320 TMEM132EQ6IEE7 984 aa13.14□□□□□ -0.31
TCF4-258ENST00000627320 NRKQ7Z2Y5 1582 aa13.14□□□□□ -0.31
TCF4-258ENST00000627320 CASZ1Q86V15 1759 aa13.13□□□□□ -0.31
TCF4-258ENST00000627320 TRIM37O94972 964 aa13.13□□□□□ -0.31
TCF4-258ENST00000627320 PPARGC1BQ86YN6 1023 aaKnown RBP13.13□□□□□ -0.31
TCF4-258ENST00000627320 CAMKK2Q96RR4 588 aa13.13□□□□□ -0.31
TCF4-258ENST00000627320 PHRF1Q9P1Y6 1649 aaKnown RBP13.13□□□□□ -0.31
TCF4-258ENST00000627320 BTG4Q9NY30 223 aa13.12□□□□□ -0.31
TCF4-258ENST00000627320 TECPR2O15040 1411 aa13.12□□□□□ -0.31
TCF4-258ENST00000627320 UTRNP46939 3433 aa13.11□□□□□ -0.31
TCF4-258ENST00000627320 NRXN1Q9ULB1 1477 aa13.11□□□□□ -0.31
TCF4-258ENST00000627320 LRPPRCP42704 1394 aaKnown RBP13.11□□□□□ -0.31
TCF4-258ENST00000627320 SBF2Q86WG5 1849 aa13.1□□□□□ -0.31
TCF4-258ENST00000627320 CHD4Q14839 1912 aa13.09□□□□□ -0.31
TCF4-258ENST00000627320 PMFBP1Q8TBY8 1022 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms