RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 U2SURPO15042 1029 aaKnown RBP11.16□□□□□ -0.62
CDKL5-206ENST00000623610 NBPF11Q86T75 865 aa11.16□□□□□ -0.62
CDKL5-206ENST00000623610 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
CDKL5-206ENST00000623610 ZNF16P17020 682 aaPredicted RBP11.15□□□□□ -0.62
CDKL5-206ENST00000623610 ZC3H6P61129 1189 aaKnown RBP11.15□□□□□ -0.62
CDKL5-206ENST00000623610 CCDC181Q5TID7 509 aa11.15□□□□□ -0.62
CDKL5-206ENST00000623610 DDRGK1Q96HY6 314 aa11.15□□□□□ -0.62
CDKL5-206ENST00000623610 YTHDC1Q96MU7 727 aaKnown RBP11.15□□□□□ -0.62
CDKL5-206ENST00000623610 SSUH2Q9Y2M2 353 aa11.15□□□□□ -0.62
CDKL5-206ENST00000623610 NAALADL2Q58DX5 795 aa11.15□□□□□ -0.62
CDKL5-206ENST00000623610 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDKL5-206ENST00000623610 PTPRGP23470 1445 aa11.14□□□□□ -0.63
CDKL5-206ENST00000623610 TNIKQ9UKE5 1360 aa11.14□□□□□ -0.63
CDKL5-206ENST00000623610 RHBDL3P58872 404 aa11.14□□□□□ -0.63
CDKL5-206ENST00000623610 KIAA0556O60303 1618 aa11.14□□□□□ -0.63
CDKL5-206ENST00000623610 ANP32CO43423 234 aa11.14□□□□□ -0.63
CDKL5-206ENST00000623610 EPB41L2O43491 1005 aaKnown RBP11.14□□□□□ -0.63
CDKL5-206ENST00000623610 POLD1P28340 1107 aa11.14□□□□□ -0.63
CDKL5-206ENST00000623610 PSME1Q06323 249 aa11.14□□□□□ -0.63
CDKL5-206ENST00000623610 ARMCX6Q7L4S7 300 aa11.14□□□□□ -0.63
CDKL5-206ENST00000623610 LARGE2Q8N3Y3 721 aa11.14□□□□□ -0.63
CDKL5-206ENST00000623610 EXOC5O00471 708 aa11.13□□□□□ -0.63
CDKL5-206ENST00000623610 NBPF1Q3BBV0 1214 aa11.13□□□□□ -0.63
CDKL5-206ENST00000623610 CASC1Q6TDU7 716 aa11.13□□□□□ -0.63
CDKL5-206ENST00000623610 WDR78Q5VTH9 848 aa11.12□□□□□ -0.63
CDKL5-206ENST00000623610 FAN1Q9Y2M0 1017 aa11.12□□□□□ -0.63
CDKL5-206ENST00000623610 ADCY10Q96PN6 1610 aa11.11□□□□□ -0.63
CDKL5-206ENST00000623610 GOLGA3Q08378 1498 aa11.1□□□□□ -0.63
CDKL5-206ENST00000623610 VGFO15240 615 aaPredicted RBP11.09□□□□□ -0.63
CDKL5-206ENST00000623610 AXDND1Q5T1B0 1012 aaPredicted RBP11.09□□□□□ -0.63
CDKL5-206ENST00000623610 LIG1P18858 919 aa11.09□□□□□ -0.63
CDKL5-206ENST00000623610 ZNF280DQ6N043 979 aa11.09□□□□□ -0.63
CDKL5-206ENST00000623610 HDAC5Q9UQL6 1122 aa11.09□□□□□ -0.63
CDKL5-206ENST00000623610 CACTIN-AS1Q8N1I8 211 aa11.08□□□□□ -0.64
CDKL5-206ENST00000623610 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.08□□□□□ -0.64
CDKL5-206ENST00000623610 CHPF2Q9P2E5 772 aa11.08□□□□□ -0.64
CDKL5-206ENST00000623610 SF3A1Q15459 793 aaKnown RBP11.08□□□□□ -0.64
CDKL5-206ENST00000623610 GET4Q7L5D6 327 aaPredicted RBP11.08□□□□□ -0.64
CDKL5-206ENST00000623610 CXorf38Q8TB03 319 aa11.08□□□□□ -0.64
CDKL5-206ENST00000623610 GNL3LQ9NVN8 582 aaKnown RBP11.08□□□□□ -0.64
CDKL5-206ENST00000623610 USTQ9Y2C2 406 aa11.08□□□□□ -0.64
CDKL5-206ENST00000623610 ZNF330Q9Y3S2 320 aaPredicted RBP11.08□□□□□ -0.64
CDKL5-206ENST00000623610 EIF3JO75822 258 aaKnown RBP11.07□□□□□ -0.64
CDKL5-206ENST00000623610 BDNFP23560 247 aa11.07□□□□□ -0.64
CDKL5-206ENST00000623610 CALRP27797 417 aaKnown RBP11.07□□□□□ -0.64
CDKL5-206ENST00000623610 C11orf96Q7Z7L8 435 aa11.07□□□□□ -0.64
CDKL5-206ENST00000623610 SAMD9Q5K651 1589 aa11.06□□□□□ -0.64
CDKL5-206ENST00000623610 UACAQ9BZF9 1416 aa11.06□□□□□ -0.64
CDKL5-206ENST00000623610 hCG_2014768A0A024R1R8 64 aa11.06□□□□□ -0.64
CDKL5-206ENST00000623610 ZNF500O60304 480 aaPredicted RBP11.06□□□□□ -0.64
CDKL5-206ENST00000623610 C4orf46Q504U0 113 aa11.06□□□□□ -0.64
CDKL5-206ENST00000623610 WDHD1O75717 1129 aaPredicted RBP11.06□□□□□ -0.64
CDKL5-206ENST00000623610 GPIHBP1Q8IV16 184 aa11.06□□□□□ -0.64
CDKL5-206ENST00000623610 TSPAN18Q96SJ8 248 aa11.06□□□□□ -0.64
CDKL5-206ENST00000623610 COG6Q9Y2V7 657 aa11.06□□□□□ -0.64
CDKL5-206ENST00000623610 PLB1Q6P1J6 1458 aa11.05□□□□□ -0.64
CDKL5-206ENST00000623610 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.05□□□□□ -0.64
CDKL5-206ENST00000623610 SPDYE2BA6NHP3 402 aa11.05□□□□□ -0.64
CDKL5-206ENST00000623610 DHX16O60231 1041 aaKnown RBP11.05□□□□□ -0.64
CDKL5-206ENST00000623610 SPDYE6P0CI01 402 aa11.05□□□□□ -0.64
CDKL5-206ENST00000623610 SPDYE2Q495Y8 402 aa11.05□□□□□ -0.64
CDKL5-206ENST00000623610 NOM1Q5C9Z4 860 aaKnown RBP11.05□□□□□ -0.64
CDKL5-206ENST00000623610 DNAJC14Q6Y2X3 702 aaPredicted RBP11.05□□□□□ -0.64
CDKL5-206ENST00000623610 IGBP1P78318 339 aa11.05□□□□□ -0.64
CDKL5-206ENST00000623610 NBPF20Q3BBV1 942 aa11.05□□□□□ -0.64
CDKL5-206ENST00000623610 TMX4Q9H1E5 349 aaPredicted RBP11.05□□□□□ -0.64
CDKL5-206ENST00000623610 ERBB3P21860 1342 aa11.04□□□□□ -0.64
CDKL5-206ENST00000623610 ABCC2Q92887 1545 aa11.04□□□□□ -0.64
CDKL5-206ENST00000623610 GYS2P54840 703 aa11.04□□□□□ -0.64
CDKL5-206ENST00000623610 PTPROQ16827 1216 aa11.04□□□□□ -0.64
CDKL5-206ENST00000623610 CREBRFQ8IUR6 639 aa11.04□□□□□ -0.64
CDKL5-206ENST00000623610 COMMD10Q9Y6G5 202 aa11.04□□□□□ -0.64
CDKL5-206ENST00000623610 ARHGEF10LQ9HCE6 1279 aa11.03□□□□□ -0.64
CDKL5-206ENST00000623610 FHOD3Q2V2M9 1422 aa11.03□□□□□ -0.64
CDKL5-206ENST00000623610 SPACA7Q96KW9 195 aa11.03□□□□□ -0.64
CDKL5-206ENST00000623610 GOPCQ9HD26 462 aa11.03□□□□□ -0.64
CDKL5-206ENST00000623610 TMA7Q9Y2S6 64 aaKnown RBP11.03□□□□□ -0.64
CDKL5-206ENST00000623610 UHRF1BP1LA0JNW5 1464 aa11.03□□□□□ -0.64
CDKL5-206ENST00000623610 GOLGA6CA6NDK9 693 aa11.02□□□□□ -0.64
CDKL5-206ENST00000623610 GOLGA6BA6NDN3 693 aa11.02□□□□□ -0.64
CDKL5-206ENST00000623610 TBC1D12O60347 775 aa11.02□□□□□ -0.64
CDKL5-206ENST00000623610 GOLGA6DP0CG33 693 aa11.02□□□□□ -0.64
CDKL5-206ENST00000623610 GOLGA6AQ9NYA3 693 aa11.02□□□□□ -0.64
CDKL5-206ENST00000623610 MAPKBP1O60336 1514 aa11.02□□□□□ -0.65
CDKL5-206ENST00000623610 ZKSCAN2Q63HK3 967 aa11.02□□□□□ -0.65
CDKL5-206ENST00000623610 EGFLAMQ63HQ2 1017 aa11.02□□□□□ -0.65
CDKL5-206ENST00000623610 PPARGC1BQ86YN6 1023 aaKnown RBP11.02□□□□□ -0.65
CDKL5-206ENST00000623610 GIPC2Q8TF65 315 aa11.02□□□□□ -0.65
CDKL5-206ENST00000623610 CCDC85AQ96PX6 553 aaPredicted RBP11.02□□□□□ -0.65
CDKL5-206ENST00000623610 ABCA8O94911 1581 aa11.01□□□□□ -0.65
CDKL5-206ENST00000623610 RPGRIP1LQ68CZ1 1315 aa11.01□□□□□ -0.65
CDKL5-206ENST00000623610 STK10O94804 968 aaKnown RBP11.01□□□□□ -0.65
CDKL5-206ENST00000623610 E2F4Q16254 413 aa11.01□□□□□ -0.65
CDKL5-206ENST00000623610 SMYD5Q6GMV2 418 aa11.01□□□□□ -0.65
CDKL5-206ENST00000623610 BCL2L13Q9BXK5 485 aa11.01□□□□□ -0.65
CDKL5-206ENST00000623610 LNPKQ9C0E8 428 aa11.01□□□□□ -0.65
CDKL5-206ENST00000623610 CCDC184Q52MB2 194 aa11□□□□□ -0.65
CDKL5-206ENST00000623610 AMOTL1Q8IY63 956 aa11□□□□□ -0.65
CDKL5-206ENST00000623610 CCDC146Q8IYE0 955 aa11□□□□□ -0.65
CDKL5-206ENST00000623610 KCNB2Q92953 911 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms