RNA–Protein interactions for RNA: ENST00000620552.4

AGRN-210, Transcript of agrin, humanhuman

TSL 5 BASIC

Gene AGRN, Length 7,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-210ENST00000620552 NUTM2BA6NNL0 878 aaPredicted RBP17.18■□□□□ 0.34
AGRN-210ENST00000620552 NUTM2EB1AL46 878 aaPredicted RBP17.18■□□□□ 0.34
AGRN-210ENST00000620552 NUTM2AQ8IVF1 878 aaPredicted RBP17.18■□□□□ 0.34
AGRN-210ENST00000620552 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
AGRN-210ENST00000620552 GNAI1P63096 354 aa17.17■□□□□ 0.34
AGRN-210ENST00000620552 TXNDC2Q86VQ3 553 aa17.17■□□□□ 0.34
AGRN-210ENST00000620552 KDM4AO75164 1064 aa17.16■□□□□ 0.34
AGRN-210ENST00000620552 SMG6Q86US8 1419 aaKnown RBP17.16■□□□□ 0.34
AGRN-210ENST00000620552 PROSER2Q86WR7 435 aaPredicted RBP17.16■□□□□ 0.34
AGRN-210ENST00000620552 ERC2O15083 957 aa17.15■□□□□ 0.34
AGRN-210ENST00000620552 IKQ13123 557 aaPredicted RBP17.15■□□□□ 0.34
AGRN-210ENST00000620552 HOOK1Q9UJC3 728 aaKnown RBP17.15■□□□□ 0.34
AGRN-210ENST00000620552 ZBED9Q6R2W3 1325 aa17.14■□□□□ 0.33
AGRN-210ENST00000620552 PDE4AP27815 886 aa17.14■□□□□ 0.33
AGRN-210ENST00000620552 RRBP1Q9P2E9 1410 aaKnown RBP17.14■□□□□ 0.33
AGRN-210ENST00000620552 SF3B2Q13435 895 aaKnown RBP17.14■□□□□ 0.33
AGRN-210ENST00000620552 BICD2Q8TD16 824 aa17.14■□□□□ 0.33
AGRN-210ENST00000620552 UBTFL1P0CB47 393 aaPredicted RBP17.13■□□□□ 0.33
AGRN-210ENST00000620552 FGD6Q6ZV73 1430 aa17.13■□□□□ 0.33
AGRN-210ENST00000620552 PIP4K2BP78356 416 aa17.12■□□□□ 0.33
AGRN-210ENST00000620552 HSP90AB4PQ58FF6 505 aa17.12■□□□□ 0.33
AGRN-210ENST00000620552 RALYLQ86SE5 291 aaKnown RBP17.12■□□□□ 0.33
AGRN-210ENST00000620552 ANKRD20A12PQ8NF67 263 aa17.12■□□□□ 0.33
AGRN-210ENST00000620552 INTS3Q68E01 1043 aaKnown RBP17.12■□□□□ 0.33
AGRN-210ENST00000620552 FYCO1Q9BQS8 1478 aa17.12■□□□□ 0.33
AGRN-210ENST00000620552 SYNJ2O15056 1496 aa17.11■□□□□ 0.33
AGRN-210ENST00000620552 VPS37CA5D8V6 355 aaPredicted RBP17.11■□□□□ 0.33
AGRN-210ENST00000620552 SAFBQ15424 915 aaKnown RBP eCLIP17.11■□□□□ 0.33
AGRN-210ENST00000620552 AFAP1Q8N556 730 aa17.11■□□□□ 0.33
AGRN-210ENST00000620552 ZNF428Q96B54 188 aa17.11■□□□□ 0.33
AGRN-210ENST00000620552 LNPKQ9C0E8 428 aa17.11■□□□□ 0.33
AGRN-210ENST00000620552 CCDC70Q6NSX1 233 aa17.1■□□□□ 0.33
AGRN-210ENST00000620552 ZNF592Q92610 1267 aa17.1■□□□□ 0.33
AGRN-210ENST00000620552 IGF1RP08069 1367 aa17.1■□□□□ 0.33
AGRN-210ENST00000620552 ANKRD50Q9ULJ7 1429 aa17.1■□□□□ 0.33
AGRN-210ENST00000620552 NINLQ9Y2I6 1382 aa17.1■□□□□ 0.33
AGRN-210ENST00000620552 SMC3Q9UQE7 1217 aa17.1■□□□□ 0.33
AGRN-210ENST00000620552 WASHC2AQ641Q2 1341 aa17.1■□□□□ 0.33
AGRN-210ENST00000620552 PRAM1Q96QH2 718 aa17.09■□□□□ 0.33
AGRN-210ENST00000620552 SKOR2Q2VWA4 1001 aaPredicted RBP17.09■□□□□ 0.33
AGRN-210ENST00000620552 PLEKHO1Q53GL0 409 aaPredicted RBP17.09■□□□□ 0.33
AGRN-210ENST00000620552 CCDC30Q5VVM6 783 aa17.09■□□□□ 0.33
AGRN-210ENST00000620552 PRG4Q92954 1404 aaPredicted RBP17.08■□□□□ 0.33
AGRN-210ENST00000620552 GRIN2BQ13224 1484 aa17.08■□□□□ 0.33
AGRN-210ENST00000620552 DDX54Q8TDD1 881 aaKnown RBP17.08■□□□□ 0.32
AGRN-210ENST00000620552 BRMS1Q9HCU9 246 aa17.08■□□□□ 0.32
AGRN-210ENST00000620552 TSHZ2Q9NRE2 1034 aa17.08■□□□□ 0.32
AGRN-210ENST00000620552 DNAJC2Q99543 621 aaKnown RBP17.08■□□□□ 0.32
AGRN-210ENST00000620552 MTHFSP49914 203 aa17.07■□□□□ 0.32
AGRN-210ENST00000620552 CCAR1Q8IX12 1150 aaKnown RBP17.07■□□□□ 0.32
AGRN-210ENST00000620552 LRRC9Q6ZRR7 1453 aa17.07■□□□□ 0.32
AGRN-210ENST00000620552 IPO7O95373 1038 aaKnown RBP17.07■□□□□ 0.32
AGRN-210ENST00000620552 NCOA2Q15596 1464 aa17.07■□□□□ 0.32
AGRN-210ENST00000620552 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
AGRN-210ENST00000620552 PANK1Q8TE04 598 aa17.07■□□□□ 0.32
AGRN-210ENST00000620552 TNNT3P45378 269 aaPredicted RBP17.07■□□□□ 0.32
AGRN-210ENST00000620552 CNTROBQ8N137 903 aa17.07■□□□□ 0.32
AGRN-210ENST00000620552 GAS2L2Q8NHY3 880 aa17.06■□□□□ 0.32
AGRN-210ENST00000620552 TATP17735 454 aaPredicted RBP17.06■□□□□ 0.32
AGRN-210ENST00000620552 EPS15P42566 896 aa17.06■□□□□ 0.32
AGRN-210ENST00000620552 TBC1D2BQ9UPU7 963 aa17.06■□□□□ 0.32
AGRN-210ENST00000620552 CNTLNQ9NXG0 1405 aa17.06■□□□□ 0.32
AGRN-210ENST00000620552 CABP4P57796 275 aa17.06■□□□□ 0.32
AGRN-210ENST00000620552 CNNM1Q9NRU3 951 aa17.06■□□□□ 0.32
AGRN-210ENST00000620552 KIF21BO75037 1637 aa17.05■□□□□ 0.32
AGRN-210ENST00000620552 NAP1L1P55209 391 aaKnown RBP17.05■□□□□ 0.32
AGRN-210ENST00000620552 TTC39AQ5SRH9 613 aa17.04■□□□□ 0.32
AGRN-210ENST00000620552 SASS6Q6UVJ0 657 aa17.04■□□□□ 0.32
AGRN-210ENST00000620552 FSD1Q9BTV5 496 aa17.04■□□□□ 0.32
AGRN-210ENST00000620552 TMEM132AQ24JP5 1023 aa17.04■□□□□ 0.32
AGRN-210ENST00000620552 CFAP70Q5T0N1 1121 aa17.04■□□□□ 0.32
AGRN-210ENST00000620552 CDK19Q9BWU1 502 aa17.04■□□□□ 0.32
AGRN-210ENST00000620552 R3HCC1Q9Y3T6 440 aaKnown RBP17.04■□□□□ 0.32
AGRN-210ENST00000620552 XBP1P17861 261 aa17.03■□□□□ 0.32
AGRN-210ENST00000620552 KIF7Q2M1P5 1343 aa17.03■□□□□ 0.32
AGRN-210ENST00000620552 RRP12Q5JTH9 1297 aaKnown RBP17.03■□□□□ 0.32
AGRN-210ENST00000620552 STK11IPQ8N1F8 1099 aa17.03■□□□□ 0.32
AGRN-210ENST00000620552 THEMISQ8N1K5 641 aaPredicted RBP17.03■□□□□ 0.32
AGRN-210ENST00000620552 CT47A1Q5JQC4 288 aaPredicted RBP17.02■□□□□ 0.32
AGRN-210ENST00000620552 CC2D2AQ9P2K1 1620 aa17.02■□□□□ 0.32
AGRN-210ENST00000620552 CCDC7Q96M83 1385 aa17.02■□□□□ 0.32
AGRN-210ENST00000620552 ATP2B2Q01814 1243 aa17.02■□□□□ 0.32
AGRN-210ENST00000620552 ODF2Q5BJF6 829 aa17.02■□□□□ 0.32
AGRN-210ENST00000620552 SUPT6HQ7KZ85 1726 aaKnown RBP17.02■□□□□ 0.31
AGRN-210ENST00000620552 MYL6BP14649 208 aa17.01■□□□□ 0.31
AGRN-210ENST00000620552 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.01■□□□□ 0.311e-6■■■■■ 89.6
AGRN-210ENST00000620552 SLC3A2P08195 630 aaKnown RBP17.01■□□□□ 0.31
AGRN-210ENST00000620552 HOMER1Q86YM7 354 aa17.01■□□□□ 0.31
AGRN-210ENST00000620552 STAC3Q96MF2 364 aa17.01■□□□□ 0.31
AGRN-210ENST00000620552 PRKAR2BP31323 418 aa17■□□□□ 0.31
AGRN-210ENST00000620552 MRC2Q9UBG0 1479 aa17■□□□□ 0.31
AGRN-210ENST00000620552 HECW1Q76N89 1606 aa17■□□□□ 0.31
AGRN-210ENST00000620552 SURF6O75683 361 aaKnown RBP17■□□□□ 0.31
AGRN-210ENST00000620552 SART3Q15020 963 aaKnown RBP17■□□□□ 0.31
AGRN-210ENST00000620552 CASKIN1Q8WXD9 1431 aa17■□□□□ 0.31
AGRN-210ENST00000620552 PSMA5P28066 241 aa16.99■□□□□ 0.31
AGRN-210ENST00000620552 PATL2C9JE40 543 aaKnown RBP16.99■□□□□ 0.31
AGRN-210ENST00000620552 RBM5P52756 815 aaKnown RBP eCLIP16.99■□□□□ 0.312e-6■■□□□ 12.6
AGRN-210ENST00000620552 CLASRPQ8N2M8 674 aaKnown RBP16.99■□□□□ 0.31
AGRN-210ENST00000620552 C1orf115Q9H7X2 142 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 274.8 ms